RNA–Protein interactions for RNA: ENST00000474160.1

SYF2-203, Transcript of SYF2 pre-mRNA splicing factor, humanhuman

TSL 2

Gene SYF2, Length 438 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYF2-203ENST00000474160 SPECC1Q5M775 1068 aa20.84■□□□□ 0.93
SYF2-203ENST00000474160 FOXD4L5Q5VV16 416 aaPredicted RBP20.84■□□□□ 0.93
SYF2-203ENST00000474160 PDE12Q6L8Q7 609 aaKnown RBP20.84■□□□□ 0.93
SYF2-203ENST00000474160 KCNT2Q6UVM3 1135 aa20.84■□□□□ 0.93
SYF2-203ENST00000474160 LRRC55Q6ZSA7 311 aa20.84■□□□□ 0.93
SYF2-203ENST00000474160 USP49Q70CQ1 688 aa20.84■□□□□ 0.93
SYF2-203ENST00000474160 SV2BQ7L1I2 683 aa20.84■□□□□ 0.93
SYF2-203ENST00000474160 KLHL23Q8NBE8 558 aa20.84■□□□□ 0.93
SYF2-203ENST00000474160 FOXD4L4Q8WXT5 416 aaPredicted RBP20.84■□□□□ 0.93
SYF2-203ENST00000474160 LPPQ93052 612 aa20.84■□□□□ 0.93
SYF2-203ENST00000474160 PPP2R3CQ969Q6 453 aa20.84■□□□□ 0.93
SYF2-203ENST00000474160 PYM1Q9BRP8 204 aaKnown RBP20.84■□□□□ 0.93
SYF2-203ENST00000474160 EIF2AQ9BY44 585 aaKnown RBP20.84■□□□□ 0.93
SYF2-203ENST00000474160 MRPL4Q9BYD3 311 aaKnown RBP20.84■□□□□ 0.93
SYF2-203ENST00000474160 LRRC27Q9C0I9 530 aa20.84■□□□□ 0.93
SYF2-203ENST00000474160 PDZD7Q9H5P4 517 aa20.84■□□□□ 0.93
SYF2-203ENST00000474160 RCOR1Q9UKL0 485 aa20.84■□□□□ 0.93
SYF2-203ENST00000474160 TNFSF13BQ9Y275 285 aa20.84■□□□□ 0.93
SYF2-203ENST00000474160 FAM13AO94988 1023 aa20.83■□□□□ 0.93
SYF2-203ENST00000474160 ITGB1P05556 798 aa20.83■□□□□ 0.93
SYF2-203ENST00000474160 ALDH7A1P49419 539 aaKnown RBP20.83■□□□□ 0.93
SYF2-203ENST00000474160 KRT17Q04695 432 aa20.83■□□□□ 0.93
SYF2-203ENST00000474160 STRN3Q13033 797 aa20.83■□□□□ 0.93
SYF2-203ENST00000474160 THNSL1Q8IYQ7 743 aa20.83■□□□□ 0.93
SYF2-203ENST00000474160 SPPL3Q8TCT6 385 aa20.83■□□□□ 0.93
SYF2-203ENST00000474160 LRRC15Q8TF66 581 aa20.83■□□□□ 0.93
SYF2-203ENST00000474160 REEP2Q9BRK0 252 aa20.83■□□□□ 0.93
SYF2-203ENST00000474160 TMEM175Q9BSA9 504 aa20.83■□□□□ 0.93
SYF2-203ENST00000474160 KIFC3Q9BVG8 833 aa20.83■□□□□ 0.93
SYF2-203ENST00000474160 NSUN3Q9H649 340 aaKnown RBP20.83■□□□□ 0.93
SYF2-203ENST00000474160 TBC1D13Q9NVG8 400 aa20.83■□□□□ 0.93
SYF2-203ENST00000474160 PUF60Q9UHX1 559 aaKnown RBP20.83■□□□□ 0.93
SYF2-203ENST00000474160 COG5Q9UP83 839 aa20.83■□□□□ 0.93
SYF2-203ENST00000474160 KIAA1671Q9BY89 1806 aa20.83■□□□□ 0.92
SYF2-203ENST00000474160 FSD2A1L4K1 749 aa20.82■□□□□ 0.92
SYF2-203ENST00000474160 GRM6O15303 877 aa20.82■□□□□ 0.92
SYF2-203ENST00000474160 TBCAO75347 108 aaKnown RBP20.82■□□□□ 0.92
SYF2-203ENST00000474160 FGF18O76093 207 aa20.82■□□□□ 0.92
SYF2-203ENST00000474160 NPTXRO95502 500 aa20.82■□□□□ 0.92
SYF2-203ENST00000474160 STAT6P42226 847 aa20.82■□□□□ 0.92
SYF2-203ENST00000474160 NCKAP1LP55160 1127 aa20.82■□□□□ 0.92
SYF2-203ENST00000474160 KRT85P78386 507 aa20.82■□□□□ 0.92
SYF2-203ENST00000474160 RNASELQ05823 741 aaKnown RBP20.82■□□□□ 0.92
SYF2-203ENST00000474160 GIT2Q14161 759 aa20.82■□□□□ 0.92
SYF2-203ENST00000474160 ATF7IP2Q5U623 682 aa20.82■□□□□ 0.92
SYF2-203ENST00000474160 TMEM161BQ8NDZ6 487 aa20.82■□□□□ 0.92
SYF2-203ENST00000474160 POLD4Q9HCU8 107 aa20.82■□□□□ 0.92
SYF2-203ENST00000474160 SPG21Q9NZD8 308 aa20.82■□□□□ 0.92
SYF2-203ENST00000474160 SEL1LQ9UBV2 794 aa20.82■□□□□ 0.92
SYF2-203ENST00000474160 MYH11P35749 1972 aa20.81■□□□□ 0.92
SYF2-203ENST00000474160 SLC16A4O15374 487 aa20.81■□□□□ 0.92
SYF2-203ENST00000474160 MAPTP10636 758 aaKnown RBP20.81■□□□□ 0.92
SYF2-203ENST00000474160 NUCB2P80303 420 aa20.81■□□□□ 0.92
SYF2-203ENST00000474160 DNM1Q05193 864 aaKnown RBP20.81■□□□□ 0.92
SYF2-203ENST00000474160 RAD51AP2Q09MP3 1159 aa20.81■□□□□ 0.92
SYF2-203ENST00000474160 DHX8Q14562 1220 aaKnown RBP20.81■□□□□ 0.92
SYF2-203ENST00000474160 AXDND1Q5T1B0 1012 aaPredicted RBP20.81■□□□□ 0.92
SYF2-203ENST00000474160 ZPBP2Q6X784 338 aa20.81■□□□□ 0.92
SYF2-203ENST00000474160 MICALL1Q8N3F8 863 aa20.81■□□□□ 0.92
SYF2-203ENST00000474160 MRPS27Q92552 414 aaKnown RBP20.81■□□□□ 0.92
SYF2-203ENST00000474160 FAM193BQ96PV7 902 aaPredicted RBP20.81■□□□□ 0.92
SYF2-203ENST00000474160 ACO2Q99798 780 aaKnown RBP20.81■□□□□ 0.92
SYF2-203ENST00000474160 MAGEF1Q9HAY2 307 aa20.81■□□□□ 0.92
SYF2-203ENST00000474160 MEIS3P2A8K0S8 358 aa20.8■□□□□ 0.92
SYF2-203ENST00000474160 SFI1A8K8P3 1242 aa20.8■□□□□ 0.92
SYF2-203ENST00000474160 ME1P48163 572 aa20.8■□□□□ 0.92
SYF2-203ENST00000474160 BCAR1P56945 870 aa20.8■□□□□ 0.92
SYF2-203ENST00000474160 BMS1Q14692 1282 aaKnown RBP20.8■□□□□ 0.92
SYF2-203ENST00000474160 NT5DC1Q5TFE4 455 aa20.8■□□□□ 0.92
SYF2-203ENST00000474160 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.8■□□□□ 0.92
SYF2-203ENST00000474160 SLC39A11Q8N1S5 342 aa20.8■□□□□ 0.92
SYF2-203ENST00000474160 MYCT1Q8N699 235 aa20.8■□□□□ 0.92
SYF2-203ENST00000474160 IQUBQ8NA54 791 aa20.8■□□□□ 0.92
SYF2-203ENST00000474160 POF1BQ8WVV4 589 aa20.8■□□□□ 0.92
SYF2-203ENST00000474160 ATXN2LQ8WWM7 1075 aaKnown RBP20.8■□□□□ 0.92
SYF2-203ENST00000474160 SCAND2PQ9GZW5 306 aaPredicted RBP20.8■□□□□ 0.92
SYF2-203ENST00000474160 TNMDQ9H2S6 317 aa20.8■□□□□ 0.92
SYF2-203ENST00000474160 NXF3Q9H4D5 531 aaKnown RBP20.8■□□□□ 0.92
SYF2-203ENST00000474160 ST6GALNAC4Q9H4F1 302 aa20.8■□□□□ 0.92
SYF2-203ENST00000474160 NRDE2Q9H7Z3 1164 aa20.8■□□□□ 0.92
SYF2-203ENST00000474160 FAM13BQ9NYF5 915 aa20.8■□□□□ 0.92
SYF2-203ENST00000474160 THEGQ9P2T0 379 aa20.8■□□□□ 0.92
SYF2-203ENST00000474160 INPP5FQ9Y2H2 1132 aa20.8■□□□□ 0.92
SYF2-203ENST00000474160 ZDHHC9Q9Y397 364 aa20.8■□□□□ 0.92
SYF2-203ENST00000474160 NPHP3-ACAD11A0A0J9YXS1 232 aa20.79■□□□□ 0.92
SYF2-203ENST00000474160 ARL5CA6NH57 179 aa20.79■□□□□ 0.92
SYF2-203ENST00000474160 TRAK2O60296 914 aa20.79■□□□□ 0.92
SYF2-203ENST00000474160 GAP43P17677 238 aa20.79■□□□□ 0.92
SYF2-203ENST00000474160 LIG1P18858 919 aa20.79■□□□□ 0.92
SYF2-203ENST00000474160 AMPD3Q01432 767 aa20.79■□□□□ 0.92
SYF2-203ENST00000474160 CCDC85BQ15834 202 aaPredicted RBP20.79■□□□□ 0.92
SYF2-203ENST00000474160 AAK1Q2M2I8 961 aa20.79■□□□□ 0.92
SYF2-203ENST00000474160 TAS1R3Q7RTX0 852 aa20.79■□□□□ 0.92
SYF2-203ENST00000474160 FAM178BQ8IXR5 827 aa20.79■□□□□ 0.92
SYF2-203ENST00000474160 PPM1EQ8WY54 764 aa20.79■□□□□ 0.92
SYF2-203ENST00000474160 TMEM169Q96HH4 297 aa20.79■□□□□ 0.92
SYF2-203ENST00000474160 PTPRHQ9HD43 1115 aa20.79■□□□□ 0.92
SYF2-203ENST00000474160 ALG13Q9NP73 1137 aaKnown RBP20.79■□□□□ 0.92
SYF2-203ENST00000474160 TLR9Q9NR96 1032 aa20.79■□□□□ 0.92
SYF2-203ENST00000474160 PCDHA7Q9UN72 937 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms