RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 TTYH1Q9H313 450 aaPredicted RBP2.98□□□□□ -1.93
CALD1-216ENST00000473714 MYH16Q9H6N6 1097 aa2.98□□□□□ -1.93
CALD1-216ENST00000473714 INTS7Q9NVH2 962 aaKnown RBP2.98□□□□□ -1.93
CALD1-216ENST00000473714 GFOD1Q9NXC2 390 aa2.98□□□□□ -1.93
CALD1-216ENST00000473714 GABBR1Q9UBS5 961 aa2.98□□□□□ -1.93
CALD1-216ENST00000473714 CGGBP1Q9UFW8 167 aaPredicted RBP2.98□□□□□ -1.93
CALD1-216ENST00000473714 ZKSCAN5Q9Y2L8 839 aa2.98□□□□□ -1.93
CALD1-216ENST00000473714 EMC9Q9Y3B6 208 aa2.98□□□□□ -1.93
CALD1-216ENST00000473714 TNFRSF18Q9Y5U5 241 aa2.98□□□□□ -1.93
CALD1-216ENST00000473714 DCHS1Q96JQ0 3298 aa2.98□□□□□ -1.93
CALD1-216ENST00000473714 ZNF831Q5JPB2 1677 aa2.98□□□□□ -1.93
CALD1-216ENST00000473714 PTPRZ1P23471 2315 aaPredicted RBP2.97□□□□□ -1.93
CALD1-216ENST00000473714 CHD6Q8TD26 2715 aa2.97□□□□□ -1.93
CALD1-216ENST00000473714 A0A087WZG4 1122 aa2.97□□□□□ -1.93
CALD1-216ENST00000473714 A0A1W2PQJ5 194 aa2.97□□□□□ -1.93
CALD1-216ENST00000473714 GSG1L2A8MUP6 293 aa2.97□□□□□ -1.93
CALD1-216ENST00000473714 TBX1O43435 398 aa2.97□□□□□ -1.93
CALD1-216ENST00000473714 CBFA2T2O43439 604 aa2.97□□□□□ -1.93
CALD1-216ENST00000473714 BRINP1O60477 761 aa2.97□□□□□ -1.93
CALD1-216ENST00000473714 VAMP4O75379 141 aa2.97□□□□□ -1.93
CALD1-216ENST00000473714 SRGAP2CP0DJJ0 459 aa2.97□□□□□ -1.93
CALD1-216ENST00000473714 SEPHS1P49903 392 aa2.97□□□□□ -1.93
CALD1-216ENST00000473714 ATXN1P54253 815 aaKnown RBP2.97□□□□□ -1.93
CALD1-216ENST00000473714 ZNF445P59923 1031 aa2.97□□□□□ -1.93
CALD1-216ENST00000473714 ST5P78524 1137 aa2.97□□□□□ -1.93
CALD1-216ENST00000473714 SP3Q02447 781 aa2.97□□□□□ -1.93
CALD1-216ENST00000473714 ARHGEF6Q15052 776 aa2.97□□□□□ -1.93
CALD1-216ENST00000473714 TTF1Q15361 905 aaPredicted RBP2.97□□□□□ -1.93
CALD1-216ENST00000473714 ST3GAL2Q16842 350 aa2.97□□□□□ -1.93
CALD1-216ENST00000473714 PIK3R6Q5UE93 754 aa2.97□□□□□ -1.93
CALD1-216ENST00000473714 IQSEC1Q6DN90 963 aa2.97□□□□□ -1.93
CALD1-216ENST00000473714 STYK1Q6J9G0 422 aa2.97□□□□□ -1.93
CALD1-216ENST00000473714 BORAQ6PGQ7 559 aa2.97□□□□□ -1.93
CALD1-216ENST00000473714 PAQR3Q6TCH7 311 aa2.97□□□□□ -1.93
CALD1-216ENST00000473714 MAMDC2Q7Z304 686 aaPredicted RBP2.97□□□□□ -1.93
CALD1-216ENST00000473714 LIMS2Q7Z4I7 341 aa2.97□□□□□ -1.93
CALD1-216ENST00000473714 SLCO6A1Q86UG4 719 aa2.97□□□□□ -1.93
CALD1-216ENST00000473714 ZBTB46Q86UZ6 589 aa2.97□□□□□ -1.93
CALD1-216ENST00000473714 RTKN2Q8IZC4 609 aa2.97□□□□□ -1.93
CALD1-216ENST00000473714 ARHGEF39Q8N4T4 335 aa2.97□□□□□ -1.93
CALD1-216ENST00000473714 OSBP2Q969R2 916 aa2.97□□□□□ -1.93
CALD1-216ENST00000473714 CHAMP1Q96JM3 812 aa2.97□□□□□ -1.93
CALD1-216ENST00000473714 SSBP3Q9BWW4 388 aaPredicted RBP2.97□□□□□ -1.93
CALD1-216ENST00000473714 BRIP1Q9BX63 1249 aa2.97□□□□□ -1.93
CALD1-216ENST00000473714 ZNF341Q9BYN7 854 aa2.97□□□□□ -1.93
CALD1-216ENST00000473714 DEF6Q9H4E7 631 aa2.97□□□□□ -1.93
CALD1-216ENST00000473714 SLC52A2Q9HAB3 445 aa2.97□□□□□ -1.93
CALD1-216ENST00000473714 CABP5Q9NP86 173 aa2.97□□□□□ -1.93
CALD1-216ENST00000473714 CHST7Q9NS84 486 aa2.97□□□□□ -1.93
CALD1-216ENST00000473714 GEMIN8Q9NWZ8 242 aaKnown RBP2.97□□□□□ -1.93
CALD1-216ENST00000473714 ERVK13-1Q9NX77 482 aa2.97□□□□□ -1.93
CALD1-216ENST00000473714 IMPACTQ9P2X3 320 aa2.97□□□□□ -1.93
CALD1-216ENST00000473714 ASAP1Q9ULH1 1129 aa2.97□□□□□ -1.93
CALD1-216ENST00000473714 ZMYND8Q9ULU4 1186 aaPredicted RBP2.97□□□□□ -1.93
CALD1-216ENST00000473714 INVSQ9Y283 1065 aa2.97□□□□□ -1.93
CALD1-216ENST00000473714 HCFC2Q9Y5Z7 792 aa2.97□□□□□ -1.93
CALD1-216ENST00000473714 FHOD1Q9Y613 1164 aa2.97□□□□□ -1.93
CALD1-216ENST00000473714 ZSWIM8A7E2V4 1837 aa2.97□□□□□ -1.93
CALD1-216ENST00000473714 MAST4O15021 2626 aa2.97□□□□□ -1.93
CALD1-216ENST00000473714 COL15A1P39059 1388 aa2.97□□□□□ -1.93
CALD1-216ENST00000473714 MYO9BQ13459 2157 aa2.97□□□□□ -1.93
CALD1-216ENST00000473714 CGNL1Q0VF96 1302 aa2.96□□□□□ -1.93
CALD1-216ENST00000473714 FAM205AQ6ZU69 1335 aa2.96□□□□□ -1.93
CALD1-216ENST00000473714 CDHR2Q9BYE9 1310 aa2.96□□□□□ -1.93
CALD1-216ENST00000473714 SSC5DA1L4H1 1573 aa2.96□□□□□ -1.94
CALD1-216ENST00000473714 CCDC194A0A1B0GVG4 234 aa2.96□□□□□ -1.94
CALD1-216ENST00000473714 GOLGA6CA6NDK9 693 aa2.96□□□□□ -1.94
CALD1-216ENST00000473714 GOLGA6BA6NDN3 693 aa2.96□□□□□ -1.94
CALD1-216ENST00000473714 GSTA4O15217 222 aa2.96□□□□□ -1.94
CALD1-216ENST00000473714 MEFVO15553 781 aaPredicted RBP2.96□□□□□ -1.94
CALD1-216ENST00000473714 TPD52L2O43399 206 aaKnown RBP2.96□□□□□ -1.94
CALD1-216ENST00000473714 DLX3O60479 287 aa2.96□□□□□ -1.94
CALD1-216ENST00000473714 PPFIA2O75334 1257 aa2.96□□□□□ -1.94
CALD1-216ENST00000473714 DNAJC8O75937 253 aaPredicted RBP2.96□□□□□ -1.94
CALD1-216ENST00000473714 NPTXRO95502 500 aa2.96□□□□□ -1.94
CALD1-216ENST00000473714 PRAMEF1O95521 474 aa2.96□□□□□ -1.94
CALD1-216ENST00000473714 CRTAMO95727 393 aa2.96□□□□□ -1.94
CALD1-216ENST00000473714 MAP4K4O95819 1239 aaPredicted RBP2.96□□□□□ -1.94
CALD1-216ENST00000473714 CYBBP04839 570 aa2.96□□□□□ -1.94
CALD1-216ENST00000473714 CD3EP07766 207 aa2.96□□□□□ -1.94
CALD1-216ENST00000473714 GOLGA6DP0CG33 693 aa2.96□□□□□ -1.94
CALD1-216ENST00000473714 EIF5P55010 431 aaKnown RBP2.96□□□□□ -1.94
CALD1-216ENST00000473714 SCRN1Q12765 414 aa2.96□□□□□ -1.94
CALD1-216ENST00000473714 MAP4K2Q12851 820 aa2.96□□□□□ -1.94
CALD1-216ENST00000473714 GRB10Q13322 594 aa2.96□□□□□ -1.94
CALD1-216ENST00000473714 HDAC1Q13547 482 aaPredicted RBP2.96□□□□□ -1.94
CALD1-216ENST00000473714 ZNF460Q14592 562 aa2.96□□□□□ -1.94
CALD1-216ENST00000473714 STAT4Q14765 748 aa2.96□□□□□ -1.94
CALD1-216ENST00000473714 PCBP1Q15365 356 aaKnown RBP eCLIP2.96□□□□□ -1.94
CALD1-216ENST00000473714 SF1Q15637 639 aaKnown RBP2.96□□□□□ -1.94
CALD1-216ENST00000473714 PRSS53Q2L4Q9 553 aa2.96□□□□□ -1.94
CALD1-216ENST00000473714 AKNAD1Q5T1N1 836 aa2.96□□□□□ -1.94
CALD1-216ENST00000473714 CDCA2Q69YH5 1023 aaPredicted RBP2.96□□□□□ -1.94
CALD1-216ENST00000473714 SLC4A10Q6U841 1118 aa2.96□□□□□ -1.94
CALD1-216ENST00000473714 OLFM4Q6UX06 510 aa2.96□□□□□ -1.94
CALD1-216ENST00000473714 B3GNT8Q7Z7M8 397 aa2.96□□□□□ -1.94
CALD1-216ENST00000473714 RNF180Q86T96 592 aa2.96□□□□□ -1.94
CALD1-216ENST00000473714 SPATS2Q86XZ4 545 aaKnown RBP2.96□□□□□ -1.94
CALD1-216ENST00000473714 CERS3Q8IU89 383 aa2.96□□□□□ -1.94
CALD1-216ENST00000473714 PASD1Q8IV76 773 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms