RNA–Protein interactions for RNA: ENST00000472267.5

MRPS18B-208, Transcript of mitochondrial ribosomal protein S18B, human

TSL 1 (best)

Gene MRPS18B, Length 1,610 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPS18B-208	ENST00000472267	CASP8AP2	Q9UKL3	1982 aa		11.72	□□□□□ -0.53
MRPS18B-208	ENST00000472267	MYADML2	A6NDP7	307 aa		11.71	□□□□□ -0.53
MRPS18B-208	ENST00000472267	RRN3P2	A6NIE6	340 aa		11.71	□□□□□ -0.53
MRPS18B-208	ENST00000472267	TTLL13P	A6NNM8	815 aa		11.71	□□□□□ -0.53
MRPS18B-208	ENST00000472267	MAPK13	O15264	365 aa		11.71	□□□□□ -0.53
MRPS18B-208	ENST00000472267	DUSP11	O75319	330 aa	Known RBP	11.71	□□□□□ -0.53
MRPS18B-208	ENST00000472267	NOL4	O94818	638 aa		11.71	□□□□□ -0.53
MRPS18B-208	ENST00000472267	PIGR	P01833	764 aa		11.71	□□□□□ -0.53
MRPS18B-208	ENST00000472267	MYCN	P04198	464 aa	Predicted RBP	11.71	□□□□□ -0.53
MRPS18B-208	ENST00000472267	PON1	P27169	355 aa		11.71	□□□□□ -0.53
MRPS18B-208	ENST00000472267	GCLM	P48507	274 aa		11.71	□□□□□ -0.53
MRPS18B-208	ENST00000472267	CACNB2	Q08289	660 aa	Predicted RBP	11.71	□□□□□ -0.53
MRPS18B-208	ENST00000472267	DNTTIP2	Q5QJE6	756 aa	Known RBP	11.71	□□□□□ -0.53
MRPS18B-208	ENST00000472267	MARCH8	Q5T0T0	291 aa		11.71	□□□□□ -0.53
MRPS18B-208	ENST00000472267	SLFN12L	Q6IEE8	588 aa		11.71	□□□□□ -0.53
MRPS18B-208	ENST00000472267	RAD9B	Q6WBX8	426 aa		11.71	□□□□□ -0.53
MRPS18B-208	ENST00000472267	ZBTB33	Q86T24	672 aa		11.71	□□□□□ -0.53
MRPS18B-208	ENST00000472267	LINC01465	Q8N7H1	131 aa		11.71	□□□□□ -0.53
MRPS18B-208	ENST00000472267	PLEKHO2	Q8TD55	490 aa		11.71	□□□□□ -0.53
MRPS18B-208	ENST00000472267	LMBR1	Q8WVP7	490 aa		11.71	□□□□□ -0.53
MRPS18B-208	ENST00000472267	KCNN1	Q92952	543 aa		11.71	□□□□□ -0.53
MRPS18B-208	ENST00000472267	MAP7D2	Q96T17	732 aa		11.71	□□□□□ -0.53
MRPS18B-208	ENST00000472267	CHP1	Q99653	195 aa		11.71	□□□□□ -0.53
MRPS18B-208	ENST00000472267	DESI2	Q9BSY9	194 aa		11.71	□□□□□ -0.53
MRPS18B-208	ENST00000472267	TCHP	Q9BT92	498 aa		11.71	□□□□□ -0.53
MRPS18B-208	ENST00000472267	MSTO1	Q9BUK6	570 aa		11.71	□□□□□ -0.53
MRPS18B-208	ENST00000472267	HAPLN2	Q9GZV7	340 aa		11.71	□□□□□ -0.53
MRPS18B-208	ENST00000472267	FAM49A	Q9H0Q0	323 aa	Predicted RBP	11.71	□□□□□ -0.53
MRPS18B-208	ENST00000472267	GAN	Q9H2C0	597 aa		11.71	□□□□□ -0.53
MRPS18B-208	ENST00000472267	CEP72	Q9P209	647 aa		11.71	□□□□□ -0.53
MRPS18B-208	ENST00000472267		A0A087WZ62	844 aa		11.71	□□□□□ -0.54
MRPS18B-208	ENST00000472267	ZNF233	A6NK53	670 aa		11.71	□□□□□ -0.54
MRPS18B-208	ENST00000472267	LRRC53	A6NM62	1247 aa		11.71	□□□□□ -0.54
MRPS18B-208	ENST00000472267	EXTL3	O43909	919 aa		11.71	□□□□□ -0.54
MRPS18B-208	ENST00000472267	MSC	O60682	206 aa		11.71	□□□□□ -0.54
MRPS18B-208	ENST00000472267	PGK1	P00558	417 aa		11.71	□□□□□ -0.54
MRPS18B-208	ENST00000472267	FECH	P22830	423 aa		11.71	□□□□□ -0.54
MRPS18B-208	ENST00000472267	HOXD10	P28358	340 aa		11.71	□□□□□ -0.54
MRPS18B-208	ENST00000472267	PHKA2	P46019	1235 aa		11.71	□□□□□ -0.54
MRPS18B-208	ENST00000472267	KCNJ6	P48051	423 aa		11.71	□□□□□ -0.54
MRPS18B-208	ENST00000472267	ACOT2	P49753	483 aa		11.71	□□□□□ -0.54
MRPS18B-208	ENST00000472267	NLRP11	P59045	1033 aa	Known RBP	11.71	□□□□□ -0.54
MRPS18B-208	ENST00000472267	PTEN	P60484	403 aa		11.71	□□□□□ -0.54
MRPS18B-208	ENST00000472267	CYP24A1	Q07973	514 aa		11.71	□□□□□ -0.54
MRPS18B-208	ENST00000472267	PPP3CA	Q08209	521 aa		11.71	□□□□□ -0.54
MRPS18B-208	ENST00000472267	GNAS	Q5JWF2	1037 aa		11.71	□□□□□ -0.54
MRPS18B-208	ENST00000472267	NFRKB	Q6P4R8	1299 aa		11.71	□□□□□ -0.54
MRPS18B-208	ENST00000472267	PDXDC1	Q6P996	788 aa		11.71	□□□□□ -0.54
MRPS18B-208	ENST00000472267	NLRP7	Q8WX94	980 aa		11.71	□□□□□ -0.54
MRPS18B-208	ENST00000472267	BAP1	Q92560	729 aa		11.71	□□□□□ -0.54
MRPS18B-208	ENST00000472267	FDXACB1	Q9BRP7	624 aa	Predicted RBP	11.71	□□□□□ -0.54
MRPS18B-208	ENST00000472267	CFHR5	Q9BXR6	569 aa		11.71	□□□□□ -0.54
MRPS18B-208	ENST00000472267	EDEM3	Q9BZQ6	932 aa		11.71	□□□□□ -0.54
MRPS18B-208	ENST00000472267	SRRD	Q9UH36	339 aa		11.71	□□□□□ -0.54
MRPS18B-208	ENST00000472267	STYXL1	Q9Y6J8	313 aa		11.71	□□□□□ -0.54
MRPS18B-208	ENST00000472267	GTPBP10	A4D1E9	387 aa	Known RBP	11.7	□□□□□ -0.54
MRPS18B-208	ENST00000472267	GPR25	O00155	361 aa		11.7	□□□□□ -0.54
MRPS18B-208	ENST00000472267	CLDN3	O15551	220 aa		11.7	□□□□□ -0.54
MRPS18B-208	ENST00000472267	SEPT4	O43236	478 aa		11.7	□□□□□ -0.54
MRPS18B-208	ENST00000472267	N4BP1	O75113	896 aa	Known RBP	11.7	□□□□□ -0.54
MRPS18B-208	ENST00000472267	CSDE1	O75534	798 aa	Known RBP	11.7	□□□□□ -0.54
MRPS18B-208	ENST00000472267	DLAT	P10515	647 aa	Known RBP	11.7	□□□□□ -0.54
MRPS18B-208	ENST00000472267	RARB	P10826	455 aa		11.7	□□□□□ -0.54
MRPS18B-208	ENST00000472267	PRKAR2A	P13861	404 aa	Known RBP	11.7	□□□□□ -0.54
MRPS18B-208	ENST00000472267	CCND3	P30281	292 aa	Predicted RBP	11.7	□□□□□ -0.54
MRPS18B-208	ENST00000472267	MBTD1	Q05BQ5	628 aa		11.7	□□□□□ -0.54
MRPS18B-208	ENST00000472267	PRPF4B	Q13523	1007 aa	Known RBP	11.7	□□□□□ -0.54
MRPS18B-208	ENST00000472267	SEZ6	Q53EL9	994 aa		11.7	□□□□□ -0.54
MRPS18B-208	ENST00000472267	C1orf220	Q5T0J3	134 aa		11.7	□□□□□ -0.54
MRPS18B-208	ENST00000472267	KLHDC7A	Q5VTJ3	777 aa		11.7	□□□□□ -0.54
MRPS18B-208	ENST00000472267	GJB7	Q6PEY0	223 aa		11.7	□□□□□ -0.54
MRPS18B-208	ENST00000472267	WDR59	Q6PJI9	974 aa		11.7	□□□□□ -0.54
MRPS18B-208	ENST00000472267	ZPBP2	Q6X784	338 aa		11.7	□□□□□ -0.54
MRPS18B-208	ENST00000472267	KIAA0319L	Q8IZA0	1049 aa		11.7	□□□□□ -0.54
MRPS18B-208	ENST00000472267	RAET1E	Q8TD07	263 aa		11.7	□□□□□ -0.54
MRPS18B-208	ENST00000472267	PPP1R13B	Q96KQ4	1090 aa		11.7	□□□□□ -0.54
MRPS18B-208	ENST00000472267	C16orf45	Q96MC5	204 aa	Predicted RBP	11.7	□□□□□ -0.54
MRPS18B-208	ENST00000472267	MFSD14A	Q96MC6	490 aa		11.7	□□□□□ -0.54
MRPS18B-208	ENST00000472267	FBXL18	Q96ME1	805 aa		11.7	□□□□□ -0.54
MRPS18B-208	ENST00000472267	POP1	Q99575	1024 aa	Known RBP	11.7	□□□□□ -0.54
MRPS18B-208	ENST00000472267	ACO2	Q99798	780 aa	Known RBP	11.7	□□□□□ -0.54
MRPS18B-208	ENST00000472267	KATNAL1	Q9BW62	490 aa		11.7	□□□□□ -0.54
MRPS18B-208	ENST00000472267	INTS2	Q9H0H0	1204 aa	Known RBP	11.7	□□□□□ -0.54
MRPS18B-208	ENST00000472267	MINDY3	Q9H8M7	445 aa		11.7	□□□□□ -0.54
MRPS18B-208	ENST00000472267	SPC25	Q9HBM1	224 aa		11.7	□□□□□ -0.54
MRPS18B-208	ENST00000472267	KIAA1586	Q9HCI6	787 aa		11.7	□□□□□ -0.54
MRPS18B-208	ENST00000472267	PLCB1	Q9NQ66	1216 aa		11.7	□□□□□ -0.54
MRPS18B-208	ENST00000472267	TOPORS	Q9NS56	1045 aa	Predicted RBP	11.7	□□□□□ -0.54
MRPS18B-208	ENST00000472267	PPP2R2C	Q9Y2T4	447 aa		11.7	□□□□□ -0.54
MRPS18B-208	ENST00000472267	FHOD1	Q9Y613	1164 aa		11.7	□□□□□ -0.54
MRPS18B-208	ENST00000472267	TRIP12	Q14669	1992 aa	Predicted RBP	11.7	□□□□□ -0.54
MRPS18B-208	ENST00000472267	NRCAM	Q92823	1304 aa		11.7	□□□□□ -0.54
MRPS18B-208	ENST00000472267		A0A0B4J269	797 aa		11.69	□□□□□ -0.54
MRPS18B-208	ENST00000472267	LRRIQ3	A6PVS8	624 aa	Predicted RBP	11.69	□□□□□ -0.54
MRPS18B-208	ENST00000472267	HAS3	O00219	553 aa		11.69	□□□□□ -0.54
MRPS18B-208	ENST00000472267	ACKR2	O00590	384 aa		11.69	□□□□□ -0.54
MRPS18B-208	ENST00000472267	KIAA0391	O15091	583 aa	Known RBP	11.69	□□□□□ -0.54
MRPS18B-208	ENST00000472267	B4GALT5	O43286	388 aa		11.69	□□□□□ -0.54
MRPS18B-208	ENST00000472267	CCP110	O43303	1012 aa		11.69	□□□□□ -0.54
MRPS18B-208	ENST00000472267	ZSCAN12	O43309	604 aa		11.69	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms