RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 KCNH6Q9H252 994 aa4.98□□□□□ -1.61
PRPF40A-207ENST00000471701 SPTLC3Q9NUV7 552 aa4.98□□□□□ -1.61
PRPF40A-207ENST00000471701 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.98□□□□□ -1.61
PRPF40A-207ENST00000471701 NOC2LQ9Y3T9 749 aaKnown RBP4.98□□□□□ -1.61
PRPF40A-207ENST00000471701 COL4A3Q01955 1670 aa4.97□□□□□ -1.61
PRPF40A-207ENST00000471701 B3GALT2O43825 422 aa4.97□□□□□ -1.61
PRPF40A-207ENST00000471701 SEC24DO94855 1032 aaPredicted RBP4.97□□□□□ -1.61
PRPF40A-207ENST00000471701 FKBP9O95302 570 aa4.97□□□□□ -1.61
PRPF40A-207ENST00000471701 NR4A1P22736 598 aa4.97□□□□□ -1.61
PRPF40A-207ENST00000471701 LSSP48449 732 aa4.97□□□□□ -1.61
PRPF40A-207ENST00000471701 APBA1Q02410 837 aa4.97□□□□□ -1.61
PRPF40A-207ENST00000471701 TAP1Q03518 808 aa4.97□□□□□ -1.61
PRPF40A-207ENST00000471701 UBE3CQ15386 1083 aa4.97□□□□□ -1.61
PRPF40A-207ENST00000471701 TERF2Q15554 542 aa4.97□□□□□ -1.61
PRPF40A-207ENST00000471701 PLEKHG4Q58EX7 1191 aa4.97□□□□□ -1.61
PRPF40A-207ENST00000471701 ZBTB41Q5SVQ8 909 aa4.97□□□□□ -1.61
PRPF40A-207ENST00000471701 LRRC55Q6ZSA7 311 aa4.97□□□□□ -1.61
PRPF40A-207ENST00000471701 FKBP9P1Q75LS8 142 aa4.97□□□□□ -1.61
PRPF40A-207ENST00000471701 DOK3Q7L591 496 aa4.97□□□□□ -1.61
PRPF40A-207ENST00000471701 GLB1L2Q8IW92 636 aa4.97□□□□□ -1.61
PRPF40A-207ENST00000471701 OR52N2Q8NGI0 321 aa4.97□□□□□ -1.61
PRPF40A-207ENST00000471701 MLST8Q9BVC4 326 aa4.97□□□□□ -1.61
PRPF40A-207ENST00000471701 SLC46A2Q9BY10 475 aa4.97□□□□□ -1.61
PRPF40A-207ENST00000471701 WNT8AQ9H1J5 351 aa4.97□□□□□ -1.61
PRPF40A-207ENST00000471701 PIF1Q9H611 641 aa4.97□□□□□ -1.61
PRPF40A-207ENST00000471701 TRPM5Q9NZQ8 1165 aa4.97□□□□□ -1.61
PRPF40A-207ENST00000471701 PRSS50Q9UI38 385 aa4.97□□□□□ -1.61
PRPF40A-207ENST00000471701 A0A1W2PR48 441 aa4.96□□□□□ -1.62
PRPF40A-207ENST00000471701 RNASET2O00584 256 aaKnown RBP4.96□□□□□ -1.62
PRPF40A-207ENST00000471701 NUDT3O95989 172 aa4.96□□□□□ -1.62
PRPF40A-207ENST00000471701 CFBP00751 764 aa4.96□□□□□ -1.62
PRPF40A-207ENST00000471701 LTA4HP09960 611 aaKnown RBP4.96□□□□□ -1.62
PRPF40A-207ENST00000471701 USP14P54578 494 aa4.96□□□□□ -1.62
PRPF40A-207ENST00000471701 PPARAQ07869 468 aa4.96□□□□□ -1.62
PRPF40A-207ENST00000471701 PCSK4Q6UW60 755 aa4.96□□□□□ -1.62
PRPF40A-207ENST00000471701 CXorf67Q86X51 503 aaPredicted RBP4.96□□□□□ -1.62
PRPF40A-207ENST00000471701 XYLT1Q86Y38 959 aa4.96□□□□□ -1.62
PRPF40A-207ENST00000471701 GPR150Q8NGU9 434 aa4.96□□□□□ -1.62
PRPF40A-207ENST00000471701 OR14C36Q8NHC7 312 aa4.96□□□□□ -1.62
PRPF40A-207ENST00000471701 MYEOVQ96EZ4 313 aa4.96□□□□□ -1.62
PRPF40A-207ENST00000471701 FDXACB1Q9BRP7 624 aaPredicted RBP4.96□□□□□ -1.62
PRPF40A-207ENST00000471701 LSM14BQ9BX40 385 aaKnown RBP4.96□□□□□ -1.62
PRPF40A-207ENST00000471701 POGKQ9P215 609 aa4.96□□□□□ -1.62
PRPF40A-207ENST00000471701 ZNHIT2Q9UHR6 403 aa4.96□□□□□ -1.62
PRPF40A-207ENST00000471701 PLAAQ9Y263 795 aa4.96□□□□□ -1.62
PRPF40A-207ENST00000471701 LCHNA4D1U4 455 aa4.95□□□□□ -1.62
PRPF40A-207ENST00000471701 FAM83GA6ND36 823 aa4.95□□□□□ -1.62
PRPF40A-207ENST00000471701 AHRRA9YTQ3 701 aa4.95□□□□□ -1.62
PRPF40A-207ENST00000471701 PRAMEF4O60810 478 aa4.95□□□□□ -1.62
PRPF40A-207ENST00000471701 CDC45O75419 566 aa4.95□□□□□ -1.62
PRPF40A-207ENST00000471701 APOBEC3AP31941 199 aaPredicted RBP4.95□□□□□ -1.62
PRPF40A-207ENST00000471701 DDB1Q16531 1140 aa4.95□□□□□ -1.62
PRPF40A-207ENST00000471701 TKFCQ3LXA3 575 aa4.95□□□□□ -1.62
PRPF40A-207ENST00000471701 C19orf54Q5BKX5 351 aa4.95□□□□□ -1.62
PRPF40A-207ENST00000471701 BROXQ5VW32 411 aa4.95□□□□□ -1.62
PRPF40A-207ENST00000471701 EFCAB12Q6NXP0 572 aa4.95□□□□□ -1.62
PRPF40A-207ENST00000471701 PDZD4Q76G19 769 aaPredicted RBP4.95□□□□□ -1.62
PRPF40A-207ENST00000471701 GDF7Q7Z4P5 450 aa4.95□□□□□ -1.62
PRPF40A-207ENST00000471701 LCORLQ8N3X6 602 aa4.95□□□□□ -1.62
PRPF40A-207ENST00000471701 MSL3Q8N5Y2 521 aaKnown RBP4.95□□□□□ -1.62
PRPF40A-207ENST00000471701 TARS2Q9BW92 718 aaKnown RBP4.95□□□□□ -1.62
PRPF40A-207ENST00000471701 ZNF768Q9H5H4 540 aaKnown RBP4.95□□□□□ -1.62
PRPF40A-207ENST00000471701 RIOX1Q9H6W3 641 aa4.95□□□□□ -1.62
PRPF40A-207ENST00000471701 GAGE12BA1L429 117 aa4.94□□□□□ -1.62
PRPF40A-207ENST00000471701 GAGE12HA6NDE8 117 aa4.94□□□□□ -1.62
PRPF40A-207ENST00000471701 DIRC3C9JPN6 131 aa4.94□□□□□ -1.62
PRPF40A-207ENST00000471701 MGAT1P26572 445 aa4.94□□□□□ -1.62
PRPF40A-207ENST00000471701 MANFP55145 182 aaKnown RBP4.94□□□□□ -1.62
PRPF40A-207ENST00000471701 CCDC62Q6P9F0 684 aa4.94□□□□□ -1.62
PRPF40A-207ENST00000471701 NPM2Q86SE8 214 aaKnown RBP4.94□□□□□ -1.62
PRPF40A-207ENST00000471701 RASSF3Q86WH2 238 aa4.94□□□□□ -1.62
PRPF40A-207ENST00000471701 SUPT20HQ8NEM7 779 aa4.94□□□□□ -1.62
PRPF40A-207ENST00000471701 LEO1Q8WVC0 666 aaPredicted RBP4.94□□□□□ -1.62
PRPF40A-207ENST00000471701 MFSD3Q96ES6 412 aa4.94□□□□□ -1.62
PRPF40A-207ENST00000471701 PAWRQ96IZ0 340 aaKnown RBP4.94□□□□□ -1.62
PRPF40A-207ENST00000471701 FEZ1Q99689 392 aa4.94□□□□□ -1.62
PRPF40A-207ENST00000471701 CPEB1Q9BZB8 566 aaKnown RBP4.94□□□□□ -1.62
PRPF40A-207ENST00000471701 AKIP1Q9NQ31 210 aa4.94□□□□□ -1.62
PRPF40A-207ENST00000471701 EVLQ9UI08 416 aaPredicted RBP4.94□□□□□ -1.62
PRPF40A-207ENST00000471701 PPP2R3BQ9Y5P8 575 aa4.94□□□□□ -1.62
PRPF40A-207ENST00000471701 HS3ST4Q9Y661 456 aa4.94□□□□□ -1.62
PRPF40A-207ENST00000471701 TBKBP1A7MCY6 615 aa4.93□□□□□ -1.62
PRPF40A-207ENST00000471701 KDM1AO60341 852 aa4.93□□□□□ -1.62
PRPF40A-207ENST00000471701 NDUFA10O95299 355 aa4.93□□□□□ -1.62
PRPF40A-207ENST00000471701 GASTP01350 101 aa4.93□□□□□ -1.62
PRPF40A-207ENST00000471701 LMNAP02545 664 aaKnown RBP4.93□□□□□ -1.62
PRPF40A-207ENST00000471701 HLA-DOAP06340 250 aa4.93□□□□□ -1.62
PRPF40A-207ENST00000471701 SPATA31D3P0C874 917 aa4.93□□□□□ -1.62
PRPF40A-207ENST00000471701 RBP3P10745 1247 aa4.93□□□□□ -1.62
PRPF40A-207ENST00000471701 PROZP22891 400 aa4.93□□□□□ -1.62
PRPF40A-207ENST00000471701 ADCYAP1R1P41586 468 aa4.93□□□□□ -1.62
PRPF40A-207ENST00000471701 PTTG1IPP53801 180 aa4.93□□□□□ -1.62
PRPF40A-207ENST00000471701 RNASE9P60153 205 aaKnown RBP4.93□□□□□ -1.62
PRPF40A-207ENST00000471701 MEF2AQ02078 507 aaPredicted RBP4.93□□□□□ -1.62
PRPF40A-207ENST00000471701 NHLH2Q02577 135 aa4.93□□□□□ -1.62
PRPF40A-207ENST00000471701 COL10A1Q03692 680 aa4.93□□□□□ -1.62
PRPF40A-207ENST00000471701 SEPT7Q16181 437 aaKnown RBP4.93□□□□□ -1.62
PRPF40A-207ENST00000471701 ATP13A4Q4VNC1 1196 aa4.93□□□□□ -1.62
PRPF40A-207ENST00000471701 DALRD3Q5D0E6 543 aaKnown RBP4.93□□□□□ -1.62
PRPF40A-207ENST00000471701 HECTD2Q5U5R9 776 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms