RNA–Protein interactions for RNA: ENST00000471364.1

RUBCN-208, Transcript of RUN and cysteine rich domain containing beclin 1 interacting protein, human

TSL 3

Gene RUBCN, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RUBCN-208	ENST00000471364	TMEM62	Q0P6H9	643 aa		13.99	□□□□□ -0.17
RUBCN-208	ENST00000471364	HAUS3	Q68CZ6	603 aa		13.99	□□□□□ -0.17
RUBCN-208	ENST00000471364	CNNM4	Q6P4Q7	775 aa		13.99	□□□□□ -0.17
RUBCN-208	ENST00000471364	FAM43B	Q6ZT52	329 aa	Predicted RBP	13.99	□□□□□ -0.17
RUBCN-208	ENST00000471364	TRIM67	Q6ZTA4	783 aa		13.99	□□□□□ -0.17
RUBCN-208	ENST00000471364	RBM23	Q86U06	439 aa	Known RBP	13.99	□□□□□ -0.17
RUBCN-208	ENST00000471364	ADSSL1	Q8N142	457 aa		13.99	□□□□□ -0.17
RUBCN-208	ENST00000471364	NME8	Q8N427	588 aa		13.99	□□□□□ -0.17
RUBCN-208	ENST00000471364	ERMN	Q8TAM6	284 aa		13.99	□□□□□ -0.17
RUBCN-208	ENST00000471364	NELFB	Q8WX92	580 aa		13.99	□□□□□ -0.17
RUBCN-208	ENST00000471364	MXRA8	Q9BRK3	442 aa		13.99	□□□□□ -0.17
RUBCN-208	ENST00000471364	CELF4	Q9BZC1	486 aa	Known RBP	13.99	□□□□□ -0.17
RUBCN-208	ENST00000471364	LRRC27	Q9C0I9	530 aa		13.99	□□□□□ -0.17
RUBCN-208	ENST00000471364	EXOC1	Q9NV70	894 aa		13.99	□□□□□ -0.17
RUBCN-208	ENST00000471364	RNF216	Q9NWF9	866 aa	Predicted RBP	13.99	□□□□□ -0.17
RUBCN-208	ENST00000471364	KIAA1024	Q9UPX6	916 aa		13.99	□□□□□ -0.17
RUBCN-208	ENST00000471364	PCDHB12	Q9Y5F1	795 aa		13.99	□□□□□ -0.17
RUBCN-208	ENST00000471364	STK24	Q9Y6E0	443 aa		13.99	□□□□□ -0.17
RUBCN-208	ENST00000471364	MEIS1	O00470	390 aa		13.98	□□□□□ -0.17
RUBCN-208	ENST00000471364	AR	P10275	920 aa		13.98	□□□□□ -0.17
RUBCN-208	ENST00000471364	PTPN5	P54829	565 aa		13.98	□□□□□ -0.17
RUBCN-208	ENST00000471364	UBE3A	Q05086	875 aa		13.98	□□□□□ -0.17
RUBCN-208	ENST00000471364	PAK1	Q13153	545 aa		13.98	□□□□□ -0.17
RUBCN-208	ENST00000471364	CEP55	Q53EZ4	464 aa		13.98	□□□□□ -0.17
RUBCN-208	ENST00000471364	HSP90AA4P	Q58FG1	418 aa		13.98	□□□□□ -0.17
RUBCN-208	ENST00000471364	SPOUT1	Q5T280	376 aa	Known RBP	13.98	□□□□□ -0.17
RUBCN-208	ENST00000471364	CDKAL1	Q5VV42	579 aa		13.98	□□□□□ -0.17
RUBCN-208	ENST00000471364	UNC13D	Q70J99	1090 aa		13.98	□□□□□ -0.17
RUBCN-208	ENST00000471364	PLPPR4	Q7Z2D5	763 aa		13.98	□□□□□ -0.17
RUBCN-208	ENST00000471364	TMC6	Q7Z403	805 aa		13.98	□□□□□ -0.17
RUBCN-208	ENST00000471364	SUGP1	Q8IWZ8	645 aa	Known RBP	13.98	□□□□□ -0.17
RUBCN-208	ENST00000471364	MICAL1	Q8TDZ2	1067 aa		13.98	□□□□□ -0.17
RUBCN-208	ENST00000471364	ZBTB10	Q96DT7	871 aa		13.98	□□□□□ -0.17
RUBCN-208	ENST00000471364	NAP1L5	Q96NT1	182 aa	Predicted RBP	13.98	□□□□□ -0.17
RUBCN-208	ENST00000471364	PCYT2	Q99447	389 aa		13.98	□□□□□ -0.17
RUBCN-208	ENST00000471364	TLE6	Q9H808	572 aa		13.98	□□□□□ -0.17
RUBCN-208	ENST00000471364	RTN4	Q9NQC3	1192 aa	Known RBP	13.98	□□□□□ -0.17
RUBCN-208	ENST00000471364	AAAS	Q9NRG9	546 aa		13.98	□□□□□ -0.17
RUBCN-208	ENST00000471364	BARX2	Q9UMQ3	279 aa	Predicted RBP	13.98	□□□□□ -0.17
RUBCN-208	ENST00000471364	USP15	Q9Y4E8	981 aa	Predicted RBP	13.98	□□□□□ -0.17
RUBCN-208	ENST00000471364	PCDHB7	Q9Y5E2	793 aa		13.98	□□□□□ -0.17
RUBCN-208	ENST00000471364	SMIM35	A0A1B0GVV1	85 aa		13.97	□□□□□ -0.17
RUBCN-208	ENST00000471364	PVALEF	A0A1B0GWK0	134 aa		13.97	□□□□□ -0.17
RUBCN-208	ENST00000471364	EML1	O00423	815 aa		13.97	□□□□□ -0.17
RUBCN-208	ENST00000471364	PSMD10	O75832	226 aa		13.97	□□□□□ -0.17
RUBCN-208	ENST00000471364	PLA2G4B	P0C869	781 aa		13.97	□□□□□ -0.17
RUBCN-208	ENST00000471364	SPATA31C1	P0DKV0	1188 aa		13.97	□□□□□ -0.17
RUBCN-208	ENST00000471364	CDK11B	P21127	795 aa	Known RBP	13.97	□□□□□ -0.17
RUBCN-208	ENST00000471364	RPA1	P27694	616 aa		13.97	□□□□□ -0.17
RUBCN-208	ENST00000471364	CLCN1	P35523	988 aa		13.97	□□□□□ -0.17
RUBCN-208	ENST00000471364	STAT5B	P51692	787 aa		13.97	□□□□□ -0.17
RUBCN-208	ENST00000471364	ZXDA	P98168	799 aa		13.97	□□□□□ -0.17
RUBCN-208	ENST00000471364	SET	Q01105	290 aa	Predicted RBP	13.97	□□□□□ -0.17
RUBCN-208	ENST00000471364	KRT76	Q01546	638 aa		13.97	□□□□□ -0.17
RUBCN-208	ENST00000471364	NFX1	Q12986	1120 aa	Known RBP	13.97	□□□□□ -0.17
RUBCN-208	ENST00000471364	CBX2	Q14781	532 aa	Predicted RBP	13.97	□□□□□ -0.17
RUBCN-208	ENST00000471364	PLCB4	Q15147	1175 aa		13.97	□□□□□ -0.17
RUBCN-208	ENST00000471364	ODR4	Q5SWX8	454 aa		13.97	□□□□□ -0.17
RUBCN-208	ENST00000471364	CATSPER3	Q86XQ3	398 aa		13.97	□□□□□ -0.17
RUBCN-208	ENST00000471364	TRAPPC12	Q8WVT3	735 aa		13.97	□□□□□ -0.17
RUBCN-208	ENST00000471364	POLR3C	Q9BUI4	534 aa	Predicted RBP	13.97	□□□□□ -0.17
RUBCN-208	ENST00000471364	PHF7	Q9BWX1	381 aa	Predicted RBP	13.97	□□□□□ -0.17
RUBCN-208	ENST00000471364	GTPBP4	Q9BZE4	634 aa	Known RBP	13.97	□□□□□ -0.17
RUBCN-208	ENST00000471364	KCNH7	Q9NS40	1196 aa		13.97	□□□□□ -0.17
RUBCN-208	ENST00000471364	IMPACT	Q9P2X3	320 aa		13.97	□□□□□ -0.17
RUBCN-208	ENST00000471364	MAPK8IP1	Q9UQF2	711 aa		13.97	□□□□□ -0.17
RUBCN-208	ENST00000471364	ARID2	Q68CP9	1835 aa		13.97	□□□□□ -0.17
RUBCN-208	ENST00000471364	NFASC	O94856	1347 aa		13.96	□□□□□ -0.17
RUBCN-208	ENST00000471364	ZNF500	O60304	480 aa	Predicted RBP	13.96	□□□□□ -0.17
RUBCN-208	ENST00000471364	GLP2R	O95838	553 aa		13.96	□□□□□ -0.17
RUBCN-208	ENST00000471364	IBSP	P21815	317 aa	Predicted RBP	13.96	□□□□□ -0.17
RUBCN-208	ENST00000471364	GATM	P50440	423 aa		13.96	□□□□□ -0.17
RUBCN-208	ENST00000471364	SLC26A2	P50443	739 aa		13.96	□□□□□ -0.17
RUBCN-208	ENST00000471364	ACTR2	P61160	394 aa		13.96	□□□□□ -0.17
RUBCN-208	ENST00000471364	STK4	Q13043	487 aa		13.96	□□□□□ -0.17
RUBCN-208	ENST00000471364	PPP2R5C	Q13362	524 aa		13.96	□□□□□ -0.17
RUBCN-208	ENST00000471364	STIM1	Q13586	685 aa		13.96	□□□□□ -0.17
RUBCN-208	ENST00000471364	COBLL1	Q53SF7	1204 aa		13.96	□□□□□ -0.17
RUBCN-208	ENST00000471364	LRCH2	Q5VUJ6	765 aa		13.96	□□□□□ -0.17
RUBCN-208	ENST00000471364	PDE12	Q6L8Q7	609 aa	Known RBP	13.96	□□□□□ -0.17
RUBCN-208	ENST00000471364	POTEG	Q6S5H5	508 aa		13.96	□□□□□ -0.17
RUBCN-208	ENST00000471364	MTHFD1L	Q6UB35	978 aa		13.96	□□□□□ -0.17
RUBCN-208	ENST00000471364	NIPA1	Q7RTP0	329 aa		13.96	□□□□□ -0.17
RUBCN-208	ENST00000471364	DYM	Q7RTS9	669 aa		13.96	□□□□□ -0.17
RUBCN-208	ENST00000471364	PRSS33	Q8NF86	280 aa		13.96	□□□□□ -0.17
RUBCN-208	ENST00000471364	CACTIN	Q8WUQ7	758 aa	Known RBP	13.96	□□□□□ -0.17
RUBCN-208	ENST00000471364	DDX12P	Q92771	950 aa		13.96	□□□□□ -0.17
RUBCN-208	ENST00000471364	DNAJC19	Q96DA6	116 aa		13.96	□□□□□ -0.17
RUBCN-208	ENST00000471364	DHTKD1	Q96HY7	919 aa	Predicted RBP	13.96	□□□□□ -0.17
RUBCN-208	ENST00000471364	CDCA3	Q99618	268 aa	Predicted RBP	13.96	□□□□□ -0.17
RUBCN-208	ENST00000471364	ZNF577	Q9BSK1	485 aa		13.96	□□□□□ -0.17
RUBCN-208	ENST00000471364	TEKT3	Q9BXF9	490 aa		13.96	□□□□□ -0.17
RUBCN-208	ENST00000471364	TLR9	Q9NR96	1032 aa		13.96	□□□□□ -0.17
RUBCN-208	ENST00000471364	INTS13	Q9NVM9	706 aa		13.96	□□□□□ -0.17
RUBCN-208	ENST00000471364	DENND3	A2RUS2	1198 aa		13.95	□□□□□ -0.18
RUBCN-208	ENST00000471364	TRIM49B	A6NDI0	452 aa		13.95	□□□□□ -0.18
RUBCN-208	ENST00000471364	SSB	P05455	408 aa	Known RBP eCLIP	13.95	□□□□□ -0.18
RUBCN-208	ENST00000471364	SRGAP2B	P0DMP2	458 aa		13.95	□□□□□ -0.18
RUBCN-208	ENST00000471364	ATF7	P17544	494 aa	Predicted RBP	13.95	□□□□□ -0.18
RUBCN-208	ENST00000471364	PPP1R2	P41236	205 aa		13.95	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms