RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 PRAG1Q86YV5 1406 aa7.18□□□□□ -1.26
CKS1B-204ENST00000471245 NFIBO00712 420 aa7.17□□□□□ -1.26
CKS1B-204ENST00000471245 NDUFS2O75306 463 aa7.17□□□□□ -1.26
CKS1B-204ENST00000471245 APOL3O95236 402 aa7.17□□□□□ -1.26
CKS1B-204ENST00000471245 LPLP06858 475 aa7.17□□□□□ -1.26
CKS1B-204ENST00000471245 FBLN1P23142 703 aa7.17□□□□□ -1.26
CKS1B-204ENST00000471245 YY1P25490 414 aa7.17□□□□□ -1.26
CKS1B-204ENST00000471245 PDE6BP35913 854 aa7.17□□□□□ -1.26
CKS1B-204ENST00000471245 STAT5AP42229 794 aa7.17□□□□□ -1.26
CKS1B-204ENST00000471245 RGS3P49796 1198 aa7.17□□□□□ -1.26
CKS1B-204ENST00000471245 PURAQ00577 322 aaKnown RBP7.17□□□□□ -1.26
CKS1B-204ENST00000471245 SPIDRQ14159 915 aa7.17□□□□□ -1.26
CKS1B-204ENST00000471245 MPZL3Q6UWV2 235 aa7.17□□□□□ -1.26
CKS1B-204ENST00000471245 B3GNT9Q6UX72 402 aa7.17□□□□□ -1.26
CKS1B-204ENST00000471245 LYSMD2Q8IV50 215 aa7.17□□□□□ -1.26
CKS1B-204ENST00000471245 SLC41A1Q8IVJ1 513 aa7.17□□□□□ -1.26
CKS1B-204ENST00000471245 RUNDC1Q96C34 613 aa7.17□□□□□ -1.26
CKS1B-204ENST00000471245 LIN37Q96GY3 246 aaPredicted RBP7.17□□□□□ -1.26
CKS1B-204ENST00000471245 AMNQ9BXJ7 453 aa7.17□□□□□ -1.26
CKS1B-204ENST00000471245 ZNF552Q9H707 407 aaPredicted RBP7.17□□□□□ -1.26
CKS1B-204ENST00000471245 SLC39A2Q9NP94 309 aa7.17□□□□□ -1.26
CKS1B-204ENST00000471245 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.17□□□□□ -1.26
CKS1B-204ENST00000471245 WASF3Q9UPY6 502 aa7.17□□□□□ -1.26
CKS1B-204ENST00000471245 RNF114Q9Y508 228 aa7.17□□□□□ -1.26
CKS1B-204ENST00000471245 FMN2Q9NZ56 1722 aa7.17□□□□□ -1.26
CKS1B-204ENST00000471245 RREB1Q92766 1687 aa7.16□□□□□ -1.26
CKS1B-204ENST00000471245 PEX10O60683 326 aa7.16□□□□□ -1.26
CKS1B-204ENST00000471245 PEX14O75381 377 aa7.16□□□□□ -1.26
CKS1B-204ENST00000471245 OFD1O75665 1012 aa7.16□□□□□ -1.26
CKS1B-204ENST00000471245 ECE1P42892 770 aa7.16□□□□□ -1.26
CKS1B-204ENST00000471245 GPR15P49685 360 aa7.16□□□□□ -1.26
CKS1B-204ENST00000471245 RHBDL3P58872 404 aa7.16□□□□□ -1.26
CKS1B-204ENST00000471245 PFKPQ01813 784 aa7.16□□□□□ -1.26
CKS1B-204ENST00000471245 HDAC1Q13547 482 aaPredicted RBP7.16□□□□□ -1.26
CKS1B-204ENST00000471245 TRIM25Q14258 630 aaKnown RBP7.16□□□□□ -1.26
CKS1B-204ENST00000471245 CCDC178Q5BJE1 867 aa7.16□□□□□ -1.26
CKS1B-204ENST00000471245 IFIT1BQ5T764 474 aaKnown RBP7.16□□□□□ -1.26
CKS1B-204ENST00000471245 SLC4A10Q6U841 1118 aa7.16□□□□□ -1.26
CKS1B-204ENST00000471245 UNQ6494/PRO21346Q6UXR6 183 aa7.16□□□□□ -1.26
CKS1B-204ENST00000471245 LIPIQ6XZB0 460 aa7.16□□□□□ -1.26
CKS1B-204ENST00000471245 KRT27Q7Z3Y8 459 aa7.16□□□□□ -1.26
CKS1B-204ENST00000471245 TMC6Q7Z403 805 aa7.16□□□□□ -1.26
CKS1B-204ENST00000471245 DTX3Q8N9I9 347 aa7.16□□□□□ -1.26
CKS1B-204ENST00000471245 OR14C36Q8NHC7 312 aa7.16□□□□□ -1.26
CKS1B-204ENST00000471245 TSPEARQ8WU66 669 aa7.16□□□□□ -1.26
CKS1B-204ENST00000471245 TMEM209Q96SK2 561 aa7.16□□□□□ -1.26
CKS1B-204ENST00000471245 BTBD2Q9BX70 525 aa7.16□□□□□ -1.26
CKS1B-204ENST00000471245 ZNF700Q9H0M5 742 aa7.16□□□□□ -1.26
CKS1B-204ENST00000471245 BCAS3Q9H6U6 928 aa7.16□□□□□ -1.26
CKS1B-204ENST00000471245 IFT122Q9HBG6 1241 aa7.16□□□□□ -1.26
CKS1B-204ENST00000471245 DLL4Q9NR61 685 aa7.16□□□□□ -1.26
CKS1B-204ENST00000471245 TUBD1Q9UJT1 453 aa7.16□□□□□ -1.26
CKS1B-204ENST00000471245 MYPNQ86TC9 1320 aa7.16□□□□□ -1.26
CKS1B-204ENST00000471245 HFM1A2PYH4 1435 aa7.16□□□□□ -1.26
CKS1B-204ENST00000471245 CAMTA1Q9Y6Y1 1673 aa7.16□□□□□ -1.26
CKS1B-204ENST00000471245 NUP188Q5SRE5 1749 aa7.15□□□□□ -1.26
CKS1B-204ENST00000471245 IFT172Q9UG01 1749 aa7.15□□□□□ -1.26
CKS1B-204ENST00000471245 LRRC10BA6NIK2 292 aa7.15□□□□□ -1.26
CKS1B-204ENST00000471245 APEX1P27695 318 aaKnown RBP7.15□□□□□ -1.26
CKS1B-204ENST00000471245 LGALS4P56470 323 aa7.15□□□□□ -1.26
CKS1B-204ENST00000471245 ZNF200P98182 395 aaPredicted RBP7.15□□□□□ -1.26
CKS1B-204ENST00000471245 CACNB2Q08289 660 aaPredicted RBP7.15□□□□□ -1.26
CKS1B-204ENST00000471245 R3HDM1Q15032 1099 aaKnown RBP7.15□□□□□ -1.26
CKS1B-204ENST00000471245 POU5F2Q8N7G0 328 aa7.15□□□□□ -1.26
CKS1B-204ENST00000471245 BHLHE22Q8NFJ8 381 aaPredicted RBP7.15□□□□□ -1.26
CKS1B-204ENST00000471245 TAAR9Q96RI9 348 aa7.15□□□□□ -1.26
CKS1B-204ENST00000471245 KRTAP4-9Q9BYQ8 210 aa7.15□□□□□ -1.26
CKS1B-204ENST00000471245 OR10A5Q9H207 317 aa7.15□□□□□ -1.26
CKS1B-204ENST00000471245 MTG2Q9H4K7 406 aa7.15□□□□□ -1.26
CKS1B-204ENST00000471245 PRDM12Q9H4Q4 367 aa7.15□□□□□ -1.26
CKS1B-204ENST00000471245 PCDH18Q9HCL0 1135 aa7.15□□□□□ -1.26
CKS1B-204ENST00000471245 C1orf112Q9NSG2 853 aa7.15□□□□□ -1.26
CKS1B-204ENST00000471245 DPP7Q9UHL4 492 aa7.15□□□□□ -1.26
CKS1B-204ENST00000471245 PRSS50Q9UI38 385 aa7.15□□□□□ -1.26
CKS1B-204ENST00000471245 CDY2AQ9Y6F7 541 aa7.15□□□□□ -1.26
CKS1B-204ENST00000471245 OPHN1O60890 802 aa7.14□□□□□ -1.27
CKS1B-204ENST00000471245 NUP155O75694 1391 aa7.14□□□□□ -1.27
CKS1B-204ENST00000471245 C8BP07358 591 aa7.14□□□□□ -1.27
CKS1B-204ENST00000471245 NCAM1P13591 858 aa7.14□□□□□ -1.27
CKS1B-204ENST00000471245 TRIM27P14373 513 aa7.14□□□□□ -1.27
CKS1B-204ENST00000471245 VIPR1P32241 457 aa7.14□□□□□ -1.27
CKS1B-204ENST00000471245 LRPPRCP42704 1394 aaKnown RBP7.14□□□□□ -1.27
CKS1B-204ENST00000471245 SLC16A1P53985 500 aa7.14□□□□□ -1.27
CKS1B-204ENST00000471245 NFATC3Q12968 1075 aa7.14□□□□□ -1.27
CKS1B-204ENST00000471245 STILQ15468 1287 aa7.14□□□□□ -1.27
CKS1B-204ENST00000471245 VPS72Q15906 364 aa7.14□□□□□ -1.27
CKS1B-204ENST00000471245 ATAT1Q5SQI0 421 aa7.14□□□□□ -1.27
CKS1B-204ENST00000471245 CD300LDQ6UXZ3 194 aa7.14□□□□□ -1.27
CKS1B-204ENST00000471245 KNDC1Q76NI1 1749 aa7.14□□□□□ -1.27
CKS1B-204ENST00000471245 CDYL2Q8N8U2 506 aa7.14□□□□□ -1.27
CKS1B-204ENST00000471245 SLC35G2Q8TBE7 412 aa7.14□□□□□ -1.27
CKS1B-204ENST00000471245 LRGUKQ96M69 825 aa7.14□□□□□ -1.27
CKS1B-204ENST00000471245 KCMF1Q9P0J7 381 aa7.14□□□□□ -1.27
CKS1B-204ENST00000471245 PCDHB6Q9Y5E3 794 aa7.14□□□□□ -1.27
CKS1B-204ENST00000471245 THSD7AQ9UPZ6 1657 aa7.13□□□□□ -1.27
CKS1B-204ENST00000471245 DISP2A7MBM2 1401 aa7.13□□□□□ -1.27
CKS1B-204ENST00000471245 SPATA31A3Q5VYP0 1347 aa7.13□□□□□ -1.27
CKS1B-204ENST00000471245 IRS2Q9Y4H2 1338 aa7.13□□□□□ -1.27
CKS1B-204ENST00000471245 A0A0A6YYJ9 748 aa7.13□□□□□ -1.27
CKS1B-204ENST00000471245 PCDH8O95206 1070 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms