RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 YY1P25490 414 aa4.52□□□□□ -1.69
VPS50-210ENST00000471188 USP11P51784 963 aa4.52□□□□□ -1.69
VPS50-210ENST00000471188 DSG1Q02413 1049 aa4.52□□□□□ -1.69
VPS50-210ENST00000471188 AUHQ13825 339 aaKnown RBP4.52□□□□□ -1.69
VPS50-210ENST00000471188 TAF1BQ53T94 588 aaPredicted RBP4.52□□□□□ -1.69
VPS50-210ENST00000471188 ACSBG2Q5FVE4 666 aa4.52□□□□□ -1.69
VPS50-210ENST00000471188 FIGNQ5HY92 759 aa4.52□□□□□ -1.69
VPS50-210ENST00000471188 MIIPQ5JXC2 388 aa4.52□□□□□ -1.69
VPS50-210ENST00000471188 PLA2G2CQ5R387 149 aa4.52□□□□□ -1.69
VPS50-210ENST00000471188 UBAP2Q5T6F2 1119 aaKnown RBP4.52□□□□□ -1.69
VPS50-210ENST00000471188 PDXDC1Q6P996 788 aa4.52□□□□□ -1.69
VPS50-210ENST00000471188 C4orf50Q6ZRC1 276 aa4.52□□□□□ -1.69
VPS50-210ENST00000471188 ARHGEF18Q6ZSZ5 1173 aa4.52□□□□□ -1.69
VPS50-210ENST00000471188 CFAP61Q8NHU2 1237 aa4.52□□□□□ -1.69
VPS50-210ENST00000471188 ACTRT1Q8TDG2 376 aa4.52□□□□□ -1.69
VPS50-210ENST00000471188 ESR2Q92731 530 aa4.52□□□□□ -1.69
VPS50-210ENST00000471188 INPP5DQ92835 1189 aa4.52□□□□□ -1.69
VPS50-210ENST00000471188 AZIN2Q96A70 460 aa4.52□□□□□ -1.69
VPS50-210ENST00000471188 TRIM11Q96F44 468 aa4.52□□□□□ -1.69
VPS50-210ENST00000471188 ZNF594Q96JF6 807 aaPredicted RBP4.52□□□□□ -1.69
VPS50-210ENST00000471188 DHRS1Q96LJ7 313 aa4.52□□□□□ -1.69
VPS50-210ENST00000471188 FNBP1Q96RU3 617 aa4.52□□□□□ -1.69
VPS50-210ENST00000471188 HAPLN3Q96S86 360 aa4.52□□□□□ -1.69
VPS50-210ENST00000471188 DUSP9Q99956 384 aaKnown RBP4.52□□□□□ -1.69
VPS50-210ENST00000471188 TCP11L1Q9NUJ3 509 aa4.52□□□□□ -1.69
VPS50-210ENST00000471188 ZSWIM5Q9P217 1185 aa4.52□□□□□ -1.69
VPS50-210ENST00000471188 SEC63Q9UGP8 760 aaKnown RBP4.52□□□□□ -1.69
VPS50-210ENST00000471188 IQSEC3Q9UPP2 1182 aaPredicted RBP4.52□□□□□ -1.69
VPS50-210ENST00000471188 DOLKQ9UPQ8 538 aa4.52□□□□□ -1.69
VPS50-210ENST00000471188 CHKBQ9Y259 395 aa4.52□□□□□ -1.69
VPS50-210ENST00000471188 V9GY48 417 aaPredicted RBP4.52□□□□□ -1.69
VPS50-210ENST00000471188 ACEP12821 1306 aa4.52□□□□□ -1.69
VPS50-210ENST00000471188 SOS2Q07890 1332 aaPredicted RBP4.52□□□□□ -1.69
VPS50-210ENST00000471188 PHLPP1O60346 1717 aa4.52□□□□□ -1.69
VPS50-210ENST00000471188 ITSN1Q15811 1721 aa4.52□□□□□ -1.69
VPS50-210ENST00000471188 NRAPQ86VF7 1730 aa4.52□□□□□ -1.69
VPS50-210ENST00000471188 SSU72P8A0A1W2PR75 194 aa4.52□□□□□ -1.69
VPS50-210ENST00000471188 SERPING1P05155 500 aa4.52□□□□□ -1.69
VPS50-210ENST00000471188 FCER1AP12319 257 aa4.52□□□□□ -1.69
VPS50-210ENST00000471188 CD46P15529 392 aa4.52□□□□□ -1.69
VPS50-210ENST00000471188 PTPN4P29074 926 aa4.52□□□□□ -1.69
VPS50-210ENST00000471188 ATP5DP30049 168 aa4.52□□□□□ -1.69
VPS50-210ENST00000471188 VPS41P49754 854 aa4.52□□□□□ -1.69
VPS50-210ENST00000471188 TMED10P49755 219 aaKnown RBP4.52□□□□□ -1.69
VPS50-210ENST00000471188 IL9RQ01113 521 aa4.52□□□□□ -1.69
VPS50-210ENST00000471188 BTKQ06187 659 aa4.52□□□□□ -1.69
VPS50-210ENST00000471188 AP1B1Q10567 949 aa4.52□□□□□ -1.69
VPS50-210ENST00000471188 ZNF211Q13398 564 aaPredicted RBP4.52□□□□□ -1.69
VPS50-210ENST00000471188 DCTN2Q13561 401 aaKnown RBP4.52□□□□□ -1.69
VPS50-210ENST00000471188 ITGA7Q13683 1181 aa4.52□□□□□ -1.69
VPS50-210ENST00000471188 GSTA3Q16772 222 aa4.52□□□□□ -1.69
VPS50-210ENST00000471188 WDR72Q3MJ13 1102 aa4.52□□□□□ -1.69
VPS50-210ENST00000471188 TMEM259Q4ZIN3 620 aa4.52□□□□□ -1.69
VPS50-210ENST00000471188 TOM1L2Q6ZVM7 507 aa4.52□□□□□ -1.69
VPS50-210ENST00000471188 COPS6Q7L5N1 327 aa4.52□□□□□ -1.69
VPS50-210ENST00000471188 CRACR2BQ8N4Y2 399 aaPredicted RBP4.52□□□□□ -1.69
VPS50-210ENST00000471188 IGDCC4Q8TDY8 1250 aa4.52□□□□□ -1.69
VPS50-210ENST00000471188 MORC4Q8TE76 937 aa4.52□□□□□ -1.69
VPS50-210ENST00000471188 XAGE3Q8WTP9 111 aa4.52□□□□□ -1.69
VPS50-210ENST00000471188 CKAP2Q8WWK9 683 aa4.52□□□□□ -1.69
VPS50-210ENST00000471188 CCDC85AQ96PX6 553 aaPredicted RBP4.52□□□□□ -1.69
VPS50-210ENST00000471188 ERP44Q9BS26 406 aa4.52□□□□□ -1.69
VPS50-210ENST00000471188 LSM14BQ9BX40 385 aaKnown RBP4.52□□□□□ -1.69
VPS50-210ENST00000471188 KANSL2Q9H9L4 492 aa4.52□□□□□ -1.69
VPS50-210ENST00000471188 BABAM1Q9NWV8 329 aa4.52□□□□□ -1.69
VPS50-210ENST00000471188 CEP126Q9P2H0 1117 aa4.52□□□□□ -1.69
VPS50-210ENST00000471188 HSFX1Q9UBD0 423 aa4.52□□□□□ -1.69
VPS50-210ENST00000471188 ARMCX3Q9UH62 379 aaPredicted RBP4.52□□□□□ -1.69
VPS50-210ENST00000471188 DCTN4Q9UJW0 460 aa4.52□□□□□ -1.69
VPS50-210ENST00000471188 TMEM59LQ9UK28 342 aa4.52□□□□□ -1.69
VPS50-210ENST00000471188 PTPN22Q9Y2R2 807 aa4.52□□□□□ -1.69
VPS50-210ENST00000471188 RTCBQ9Y3I0 505 aaKnown RBP4.52□□□□□ -1.69
VPS50-210ENST00000471188 FLT4P35916 1363 aa4.51□□□□□ -1.69
VPS50-210ENST00000471188 HTR3EA5X5Y0 456 aa4.51□□□□□ -1.69
VPS50-210ENST00000471188 KRT38O76015 456 aa4.51□□□□□ -1.69
VPS50-210ENST00000471188 STK10O94804 968 aaKnown RBP4.51□□□□□ -1.69
VPS50-210ENST00000471188 LCA5LO95447 670 aa4.51□□□□□ -1.69
VPS50-210ENST00000471188 HOXB7P09629 217 aa4.51□□□□□ -1.69
VPS50-210ENST00000471188 VARSP26640 1264 aaKnown RBP4.51□□□□□ -1.69
VPS50-210ENST00000471188 HNRNPH3P31942 346 aaKnown RBP4.51□□□□□ -1.69
VPS50-210ENST00000471188 RGS2P41220 211 aa4.51□□□□□ -1.69
VPS50-210ENST00000471188 ZAP70P43403 619 aa4.51□□□□□ -1.69
VPS50-210ENST00000471188 STRN3Q13033 797 aa4.51□□□□□ -1.69
VPS50-210ENST00000471188 STK4Q13043 487 aa4.51□□□□□ -1.69
VPS50-210ENST00000471188 MED21Q13503 144 aa4.51□□□□□ -1.69
VPS50-210ENST00000471188 GIT2Q14161 759 aa4.51□□□□□ -1.69
VPS50-210ENST00000471188 MTFR1Q15390 333 aa4.51□□□□□ -1.69
VPS50-210ENST00000471188 SLC18A3Q16572 532 aa4.51□□□□□ -1.69
VPS50-210ENST00000471188 MAN2A1Q16706 1144 aa4.51□□□□□ -1.69
VPS50-210ENST00000471188 EXOC3L4Q17RC7 722 aa4.51□□□□□ -1.69
VPS50-210ENST00000471188 KIAA1755Q5JYT7 1200 aa4.51□□□□□ -1.69
VPS50-210ENST00000471188 C6orf183Q5T699 404 aa4.51□□□□□ -1.69
VPS50-210ENST00000471188 C6orf163Q5TEZ5 329 aa4.51□□□□□ -1.69
VPS50-210ENST00000471188 SYDE2Q5VT97 1194 aa4.51□□□□□ -1.69
VPS50-210ENST00000471188 SPTY2D1Q68D10 685 aaPredicted RBP4.51□□□□□ -1.69
VPS50-210ENST00000471188 THOC7Q6I9Y2 204 aaKnown RBP4.51□□□□□ -1.69
VPS50-210ENST00000471188 ZNF530Q6P9A1 599 aaPredicted RBP4.51□□□□□ -1.69
VPS50-210ENST00000471188 PHLDB2Q86SQ0 1253 aa4.51□□□□□ -1.69
VPS50-210ENST00000471188 RASSF3Q86WH2 238 aa4.51□□□□□ -1.69
VPS50-210ENST00000471188 SLC15A3Q8IY34 581 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms