RNA–Protein interactions for RNA: ENST00000470723.5

SND1-209, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-209ENST00000470723 EXOC1Q9NV70 894 aa13.87□□□□□ -0.19
SND1-209ENST00000470723 TBC1D7Q9P0N9 293 aa13.87□□□□□ -0.19
SND1-209ENST00000470723 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.86□□□□□ -0.19
SND1-209ENST00000470723 K7ENM7 598 aa13.86□□□□□ -0.19
SND1-209ENST00000470723 TOM1L1O75674 476 aa13.86□□□□□ -0.19
SND1-209ENST00000470723 MYBP10242 640 aa13.86□□□□□ -0.19
SND1-209ENST00000470723 SKIP12755 728 aa13.86□□□□□ -0.19
SND1-209ENST00000470723 KCNA1Q09470 495 aa13.86□□□□□ -0.19
SND1-209ENST00000470723 MORC3Q14149 939 aa13.86□□□□□ -0.19
SND1-209ENST00000470723 SHHQ15465 462 aa13.86□□□□□ -0.19
SND1-209ENST00000470723 CAMK4Q16566 473 aa13.86□□□□□ -0.19
SND1-209ENST00000470723 KLHL40Q2TBA0 621 aa13.86□□□□□ -0.19
SND1-209ENST00000470723 SKOR2Q2VWA4 1001 aaPredicted RBP13.86□□□□□ -0.19
SND1-209ENST00000470723 ZNF658Q5TYW1 1059 aaPredicted RBP13.86□□□□□ -0.19
SND1-209ENST00000470723 OTOP2Q7RTS6 562 aa13.86□□□□□ -0.19
SND1-209ENST00000470723 ZNF598Q86UK7 904 aaKnown RBP13.86□□□□□ -0.19
SND1-209ENST00000470723 TRIML1Q8N9V2 468 aa13.86□□□□□ -0.19
SND1-209ENST00000470723 GLIS3Q8NEA6 775 aa13.86□□□□□ -0.19
SND1-209ENST00000470723 TOP1MTQ969P6 601 aa13.86□□□□□ -0.19
SND1-209ENST00000470723 TARS2Q9BW92 718 aaKnown RBP13.86□□□□□ -0.19
SND1-209ENST00000470723 TMEM206Q9H813 350 aa13.86□□□□□ -0.19
SND1-209ENST00000470723 SLC39A2Q9NP94 309 aa13.86□□□□□ -0.19
SND1-209ENST00000470723 RNF216Q9NWF9 866 aaPredicted RBP13.86□□□□□ -0.19
SND1-209ENST00000470723 MAN1B1Q9UKM7 699 aa13.86□□□□□ -0.19
SND1-209ENST00000470723 EXOC7Q9UPT5 735 aa13.86□□□□□ -0.19
SND1-209ENST00000470723 LAMA2P24043 3122 aaKnown RBP13.86□□□□□ -0.19
SND1-209ENST00000470723 MICAL3Q7RTP6 2002 aa13.86□□□□□ -0.19
SND1-209ENST00000470723 UBE4BO95155 1302 aa13.86□□□□□ -0.19
SND1-209ENST00000470723 N4BP3O15049 544 aa13.85□□□□□ -0.19
SND1-209ENST00000470723 PRPF6O94906 941 aaKnown RBP13.85□□□□□ -0.19
SND1-209ENST00000470723 GCNT3O95395 438 aa13.85□□□□□ -0.19
SND1-209ENST00000470723 BMP6P22004 513 aa13.85□□□□□ -0.19
SND1-209ENST00000470723 RAB27AP51159 221 aa13.85□□□□□ -0.19
SND1-209ENST00000470723 WDR5P61964 334 aaKnown RBP13.85□□□□□ -0.19
SND1-209ENST00000470723 C9orf50Q5SZB4 431 aa13.85□□□□□ -0.19
SND1-209ENST00000470723 ATF7IP2Q5U623 682 aa13.85□□□□□ -0.19
SND1-209ENST00000470723 SLFN12LQ6IEE8 588 aa13.85□□□□□ -0.19
SND1-209ENST00000470723 SLC27A1Q6PCB7 646 aa13.85□□□□□ -0.19
SND1-209ENST00000470723 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.85□□□□□ -0.192e-9■■■■□ 26.5
SND1-209ENST00000470723 GUF1Q8N442 669 aaKnown RBP13.85□□□□□ -0.19
SND1-209ENST00000470723 ERCC4Q92889 916 aaPredicted RBP13.85□□□□□ -0.19
SND1-209ENST00000470723 CPB2Q96IY4 423 aa13.85□□□□□ -0.19
SND1-209ENST00000470723 UBE2OQ9C0C9 1292 aaKnown RBP13.85□□□□□ -0.19
SND1-209ENST00000470723 NUP62CLQ9H1M0 184 aa13.85□□□□□ -0.19
SND1-209ENST00000470723 PDZD7Q9H5P4 517 aa13.85□□□□□ -0.19
SND1-209ENST00000470723 CXXC1Q9P0U4 656 aaPredicted RBP13.85□□□□□ -0.19
SND1-209ENST00000470723 CGNQ9P2M7 1197 aaKnown RBP13.85□□□□□ -0.19
SND1-209ENST00000470723 PIN4Q9Y237 131 aaKnown RBP13.85□□□□□ -0.19
SND1-209ENST00000470723 USP20Q9Y2K6 914 aa13.85□□□□□ -0.19
SND1-209ENST00000470723 A0A0B4J269 797 aa13.84□□□□□ -0.19
SND1-209ENST00000470723 A0A1W2PPC1 479 aa13.84□□□□□ -0.19
SND1-209ENST00000470723 RBAK-RBAKDNI3L0D1 243 aa13.84□□□□□ -0.19
SND1-209ENST00000470723 TGFB1I1O43294 461 aa13.84□□□□□ -0.19
SND1-209ENST00000470723 KIF20AO95235 890 aa13.84□□□□□ -0.19
SND1-209ENST00000470723 POU5F1Q01860 360 aaKnown RBP13.84□□□□□ -0.19
SND1-209ENST00000470723 MCL1Q07820 350 aa13.84□□□□□ -0.19
SND1-209ENST00000470723 NFKBIBQ15653 356 aa13.84□□□□□ -0.19
SND1-209ENST00000470723 KNOP1Q1ED39 458 aaKnown RBP13.84□□□□□ -0.19
SND1-209ENST00000470723 EEF1DP3Q658K8 133 aa13.84□□□□□ -0.19
SND1-209ENST00000470723 SLC39A4Q6P5W5 647 aa13.84□□□□□ -0.19
SND1-209ENST00000470723 ECHDC2Q86YB7 292 aa13.84□□□□□ -0.19
SND1-209ENST00000470723 MYOCDQ8IZQ8 938 aa13.84□□□□□ -0.19
SND1-209ENST00000470723 SMG8Q8ND04 991 aaKnown RBP13.84□□□□□ -0.19
SND1-209ENST00000470723 MTIF3Q9H2K0 278 aaKnown RBP13.84□□□□□ -0.19
SND1-209ENST00000470723 KCTD10Q9H3F6 313 aa13.84□□□□□ -0.19
SND1-209ENST00000470723 FAM105AQ9NUU6 356 aa13.84□□□□□ -0.19
SND1-209ENST00000470723 TMEM161AQ9NX61 479 aa13.84□□□□□ -0.19
SND1-209ENST00000470723 PCDHB2Q9Y5E7 798 aa13.84□□□□□ -0.19
SND1-209ENST00000470723 ANKRD63C9JTQ0 380 aa13.83□□□□□ -0.2
SND1-209ENST00000470723 PDXKO00764 312 aa13.83□□□□□ -0.2
SND1-209ENST00000470723 CLDN3O15551 220 aa13.83□□□□□ -0.2
SND1-209ENST00000470723 AMHP03971 560 aa13.83□□□□□ -0.2
SND1-209ENST00000470723 MCF2P10911 925 aa13.83□□□□□ -0.2
SND1-209ENST00000470723 GARTP22102 1010 aa13.83□□□□□ -0.2
SND1-209ENST00000470723 ADSSP30520 456 aa13.83□□□□□ -0.2
SND1-209ENST00000470723 MYBPC2Q14324 1141 aa13.83□□□□□ -0.2
SND1-209ENST00000470723 DCAF4L1Q3SXM0 396 aa13.83□□□□□ -0.2
SND1-209ENST00000470723 CCDC183Q5T5S1 534 aa13.83□□□□□ -0.2
SND1-209ENST00000470723 TWF2Q6IBS0 349 aaKnown RBP13.83□□□□□ -0.2
SND1-209ENST00000470723 CENPPQ6IPU0 288 aa13.83□□□□□ -0.2
SND1-209ENST00000470723 FOXR2Q6PJQ5 311 aa13.83□□□□□ -0.2
SND1-209ENST00000470723 MPZL3Q6UWV2 235 aa13.83□□□□□ -0.2
SND1-209ENST00000470723 APBB1IPQ7Z5R6 666 aaPredicted RBP13.83□□□□□ -0.2
SND1-209ENST00000470723 C12orf56Q8IXR9 622 aa13.83□□□□□ -0.2
SND1-209ENST00000470723 ADSSL1Q8N142 457 aa13.83□□□□□ -0.2
SND1-209ENST00000470723 ZBTB45Q96K62 511 aaPredicted RBP13.83□□□□□ -0.2
SND1-209ENST00000470723 EIF2AQ9BY44 585 aaKnown RBP13.83□□□□□ -0.2
SND1-209ENST00000470723 HAPLN2Q9GZV7 340 aa13.83□□□□□ -0.2
SND1-209ENST00000470723 GBP3Q9H0R5 595 aa13.83□□□□□ -0.2
SND1-209ENST00000470723 TMEM63CQ9P1W3 806 aa13.83□□□□□ -0.2
SND1-209ENST00000470723 SLC4A7Q9Y6M7 1214 aa13.83□□□□□ -0.2
SND1-209ENST00000470723 PPP1R3GB7ZBB8 358 aa13.82□□□□□ -0.2
SND1-209ENST00000470723 KIAA0391O15091 583 aaKnown RBP13.82□□□□□ -0.2
SND1-209ENST00000470723 INPPL1O15357 1258 aa13.82□□□□□ -0.2
SND1-209ENST00000470723 FAM189A1O60320 539 aa13.82□□□□□ -0.2
SND1-209ENST00000470723 ADRB2P07550 413 aa13.82□□□□□ -0.2
SND1-209ENST00000470723 STAG3L1P0CL83 205 aa13.82□□□□□ -0.2
SND1-209ENST00000470723 ATF7P17544 494 aaPredicted RBP13.82□□□□□ -0.2
SND1-209ENST00000470723 PPP1R2P41236 205 aa13.82□□□□□ -0.2
SND1-209ENST00000470723 PRCPP42785 496 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms