RNA–Protein interactions for RNA: ENST00000470258.5

NHLRC3-203, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,298 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-203ENST00000470258 UBL4BQ8N7F7 174 aa10.21□□□□□ -0.78
NHLRC3-203ENST00000470258 ZCRB1Q8TBF4 217 aaKnown RBP10.21□□□□□ -0.78
NHLRC3-203ENST00000470258 SCFD1Q8WVM8 642 aa10.21□□□□□ -0.78
NHLRC3-203ENST00000470258 MCUR1Q96AQ8 359 aa10.21□□□□□ -0.78
NHLRC3-203ENST00000470258 SLC7A6OSQ96CW6 309 aaPredicted RBP10.21□□□□□ -0.78
NHLRC3-203ENST00000470258 CRNKL1Q9BZJ0 848 aaKnown RBP10.21□□□□□ -0.78
NHLRC3-203ENST00000470258 ROPN1BQ9BZX4 212 aaPredicted RBP10.21□□□□□ -0.78
NHLRC3-203ENST00000470258 LRRC27Q9C0I9 530 aa10.21□□□□□ -0.78
NHLRC3-203ENST00000470258 ROPN1Q9HAT0 212 aaPredicted RBP10.21□□□□□ -0.78
NHLRC3-203ENST00000470258 ZFP69BQ9UJL9 534 aa10.21□□□□□ -0.78
NHLRC3-203ENST00000470258 KIAA1024Q9UPX6 916 aa10.21□□□□□ -0.78
NHLRC3-203ENST00000470258 NIP7Q9Y221 180 aaKnown RBP eCLIP10.21□□□□□ -0.78
NHLRC3-203ENST00000470258 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.21□□□□□ -0.78
NHLRC3-203ENST00000470258 ALG6Q9Y672 507 aa10.21□□□□□ -0.78
NHLRC3-203ENST00000470258 CLIC2O15247 247 aa10.2□□□□□ -0.78
NHLRC3-203ENST00000470258 PFDN1O60925 122 aa10.2□□□□□ -0.78
NHLRC3-203ENST00000470258 LRRN2O75325 713 aa10.2□□□□□ -0.78
NHLRC3-203ENST00000470258 BAG3O95817 575 aa10.2□□□□□ -0.78
NHLRC3-203ENST00000470258 WASHC2DQ5SRD0 308 aa10.2□□□□□ -0.78
NHLRC3-203ENST00000470258 GALNT17Q6IS24 598 aa10.2□□□□□ -0.78
NHLRC3-203ENST00000470258 CYP4F22Q6NT55 531 aa10.2□□□□□ -0.78
NHLRC3-203ENST00000470258 LRRC74BQ6ZQY2 392 aa10.2□□□□□ -0.78
NHLRC3-203ENST00000470258 KIAA0825Q8IV33 1275 aa10.2□□□□□ -0.78
NHLRC3-203ENST00000470258 VPS52Q8N1B4 723 aa10.2□□□□□ -0.78
NHLRC3-203ENST00000470258 C1orf54Q8WWF1 131 aa10.2□□□□□ -0.78
NHLRC3-203ENST00000470258 FAM136AQ96C01 138 aa10.2□□□□□ -0.78
NHLRC3-203ENST00000470258 SERPINB12Q96P63 405 aa10.2□□□□□ -0.78
NHLRC3-203ENST00000470258 VCX3BQ9H321 246 aa10.2□□□□□ -0.78
NHLRC3-203ENST00000470258 VCX3AQ9NNX9 186 aa10.2□□□□□ -0.78
NHLRC3-203ENST00000470258 DCP1AQ9NPI6 582 aaPredicted RBP10.2□□□□□ -0.78
NHLRC3-203ENST00000470258 MAP3K7O43318 606 aa10.2□□□□□ -0.78
NHLRC3-203ENST00000470258 DCTN3O75935 186 aa10.2□□□□□ -0.78
NHLRC3-203ENST00000470258 DLATP10515 647 aaKnown RBP10.2□□□□□ -0.78
NHLRC3-203ENST00000470258 VCAM1P19320 739 aa10.2□□□□□ -0.78
NHLRC3-203ENST00000470258 TNFAIP3P21580 790 aa10.2□□□□□ -0.78
NHLRC3-203ENST00000470258 ENDOVQ8N8Q3 282 aaKnown RBP10.2□□□□□ -0.78
NHLRC3-203ENST00000470258 SLC44A5Q8NCS7 719 aa10.2□□□□□ -0.78
NHLRC3-203ENST00000470258 NRG4Q8WWG1 115 aa10.2□□□□□ -0.78
NHLRC3-203ENST00000470258 DNAJC19Q96DA6 116 aa10.2□□□□□ -0.78
NHLRC3-203ENST00000470258 TMEM109Q9BVC6 243 aa10.2□□□□□ -0.78
NHLRC3-203ENST00000470258 DMAP1Q9NPF5 467 aaPredicted RBP10.2□□□□□ -0.78
NHLRC3-203ENST00000470258 UBN1Q9NPG3 1134 aa10.2□□□□□ -0.78
NHLRC3-203ENST00000470258 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.2□□□□□ -0.78
NHLRC3-203ENST00000470258 BCS1LQ9Y276 419 aa10.2□□□□□ -0.78
NHLRC3-203ENST00000470258 DUOX1Q9NRD9 1551 aa10.2□□□□□ -0.78
NHLRC3-203ENST00000470258 A0A0A6YYK5 440 aaPredicted RBP10.2□□□□□ -0.78
NHLRC3-203ENST00000470258 WDR91A4D1P6 747 aa10.2□□□□□ -0.78
NHLRC3-203ENST00000470258 MAGEA13PA6NCF6 341 aa10.2□□□□□ -0.78
NHLRC3-203ENST00000470258 STARD3NLO95772 234 aa10.2□□□□□ -0.78
NHLRC3-203ENST00000470258 DRG2P55039 364 aaKnown RBP10.2□□□□□ -0.78
NHLRC3-203ENST00000470258 CHRNDQ07001 517 aa10.2□□□□□ -0.78
NHLRC3-203ENST00000470258 USP17L2Q6R6M4 530 aa10.2□□□□□ -0.78
NHLRC3-203ENST00000470258 CEP128Q6ZU80 1094 aa10.2□□□□□ -0.78
NHLRC3-203ENST00000470258 MTDHQ86UE4 582 aaKnown RBP10.2□□□□□ -0.78
NHLRC3-203ENST00000470258 PALB2Q86YC2 1186 aa10.2□□□□□ -0.78
NHLRC3-203ENST00000470258 INPP5DQ92835 1189 aa10.2□□□□□ -0.78
NHLRC3-203ENST00000470258 GRAMD1AQ96CP6 724 aa10.2□□□□□ -0.78
NHLRC3-203ENST00000470258 DTNBP1Q96EV8 351 aa10.2□□□□□ -0.78
NHLRC3-203ENST00000470258 C9orf72Q96LT7 481 aa10.2□□□□□ -0.78
NHLRC3-203ENST00000470258 NPHS2Q9NP85 383 aa10.2□□□□□ -0.78
NHLRC3-203ENST00000470258 IL17RBQ9NRM6 502 aa10.2□□□□□ -0.78
NHLRC3-203ENST00000470258 DNAAF2Q9NVR5 837 aaKnown RBP10.2□□□□□ -0.78
NHLRC3-203ENST00000470258 MTUS1Q9ULD2 1270 aa10.2□□□□□ -0.78
NHLRC3-203ENST00000470258 TTC7AQ9ULT0 858 aaPredicted RBP10.2□□□□□ -0.78
NHLRC3-203ENST00000470258 SYNGAP1Q96PV0 1343 aa10.19□□□□□ -0.78
NHLRC3-203ENST00000470258 CFAP69A5D8W1 941 aa10.19□□□□□ -0.78
NHLRC3-203ENST00000470258 ECEL1O95672 775 aa10.19□□□□□ -0.78
NHLRC3-203ENST00000470258 TTLL1O95922 423 aa10.19□□□□□ -0.78
NHLRC3-203ENST00000470258 LMNAP02545 664 aaKnown RBP10.19□□□□□ -0.78
NHLRC3-203ENST00000470258 T-ENOLP0DO92 83 aa10.19□□□□□ -0.78
NHLRC3-203ENST00000470258 CCNFP41002 786 aa10.19□□□□□ -0.78
NHLRC3-203ENST00000470258 CASP4P49662 377 aa10.19□□□□□ -0.78
NHLRC3-203ENST00000470258 CASP5P51878 434 aa10.19□□□□□ -0.78
NHLRC3-203ENST00000470258 GRM4Q14833 912 aa10.19□□□□□ -0.78
NHLRC3-203ENST00000470258 CNPY1Q3B7I2 92 aa10.19□□□□□ -0.78
NHLRC3-203ENST00000470258 CFAP157Q5JU67 520 aa10.19□□□□□ -0.78
NHLRC3-203ENST00000470258 ZNF746Q6NUN9 644 aaPredicted RBP10.19□□□□□ -0.78
NHLRC3-203ENST00000470258 PPP1R21Q6ZMI0 780 aa10.19□□□□□ -0.78
NHLRC3-203ENST00000470258 ZNF365Q70YC5 407 aa10.19□□□□□ -0.78
NHLRC3-203ENST00000470258 TRMT10CQ7L0Y3 403 aaKnown RBP10.19□□□□□ -0.78
NHLRC3-203ENST00000470258 ZDHHC14Q8IZN3 488 aa10.19□□□□□ -0.78
NHLRC3-203ENST00000470258 DAGLBQ8NCG7 672 aa10.19□□□□□ -0.78
NHLRC3-203ENST00000470258 PIGSQ96S52 555 aa10.19□□□□□ -0.78
NHLRC3-203ENST00000470258 MMADHCQ9H3L0 296 aaPredicted RBP10.19□□□□□ -0.78
NHLRC3-203ENST00000470258 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.19□□□□□ -0.78
NHLRC3-203ENST00000470258 CCDC87Q9NVE4 849 aa10.19□□□□□ -0.78
NHLRC3-203ENST00000470258 COG5Q9UP83 839 aa10.19□□□□□ -0.78
NHLRC3-203ENST00000470258 NAALADL1Q9UQQ1 740 aa10.19□□□□□ -0.78
NHLRC3-203ENST00000470258 USP20Q9Y2K6 914 aa10.19□□□□□ -0.78
NHLRC3-203ENST00000470258 SPOPO43791 374 aa10.19□□□□□ -0.78
NHLRC3-203ENST00000470258 SETSIPP0DME0 302 aa10.19□□□□□ -0.78
NHLRC3-203ENST00000470258 CETPP11597 493 aa10.19□□□□□ -0.78
NHLRC3-203ENST00000470258 COILP38432 576 aaPredicted RBP10.19□□□□□ -0.78
NHLRC3-203ENST00000470258 CCDC15Q0P6D6 951 aa10.19□□□□□ -0.78
NHLRC3-203ENST00000470258 HP1BP3Q5SSJ5 553 aaPredicted RBP10.19□□□□□ -0.78
NHLRC3-203ENST00000470258 C4orf50Q6ZRC1 276 aa10.19□□□□□ -0.78
NHLRC3-203ENST00000470258 C4orf33Q8N1A6 199 aa10.19□□□□□ -0.78
NHLRC3-203ENST00000470258 PDCD7Q8N8D1 485 aaKnown RBP10.19□□□□□ -0.78
NHLRC3-203ENST00000470258 CYTH2Q99418 400 aa10.19□□□□□ -0.78
NHLRC3-203ENST00000470258 TMOD3Q9NYL9 352 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms