RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-209ENST00000470247 RPS6KA5O75582 802 aa12.33□□□□□ -0.44
SREBF1-209ENST00000470247 CAVIN2O95810 425 aa12.33□□□□□ -0.44
SREBF1-209ENST00000470247 CYP2C18P33260 490 aa12.33□□□□□ -0.44
SREBF1-209ENST00000470247 SNRPFP62306 86 aaKnown RBP12.33□□□□□ -0.44
SREBF1-209ENST00000470247 LRRC63Q05C16 580 aa12.33□□□□□ -0.44
SREBF1-209ENST00000470247 PRPF4BQ13523 1007 aaKnown RBP12.33□□□□□ -0.44
SREBF1-209ENST00000470247 DSC3Q14574 896 aa12.33□□□□□ -0.44
SREBF1-209ENST00000470247 EDRF1Q3B7T1 1238 aa12.33□□□□□ -0.44
SREBF1-209ENST00000470247 ATF7IP2Q5U623 682 aa12.33□□□□□ -0.44
SREBF1-209ENST00000470247 SPATA1Q5VX52 437 aa12.33□□□□□ -0.44
SREBF1-209ENST00000470247 CATSPER4Q7RTX7 472 aa12.33□□□□□ -0.44
SREBF1-209ENST00000470247 CDR2LQ86X02 465 aaPredicted RBP12.33□□□□□ -0.44
SREBF1-209ENST00000470247 SLC9A9Q8IVB4 645 aa12.33□□□□□ -0.44
SREBF1-209ENST00000470247 SYCP3Q8IZU3 236 aa12.33□□□□□ -0.44
SREBF1-209ENST00000470247 CCDC155Q8N6L0 562 aa12.33□□□□□ -0.44
SREBF1-209ENST00000470247 FAM200AQ8TCP9 573 aa12.33□□□□□ -0.44
SREBF1-209ENST00000470247 CPB2Q96IY4 423 aa12.33□□□□□ -0.44
SREBF1-209ENST00000470247 CBWD1Q9BRT8 395 aa12.33□□□□□ -0.44
SREBF1-209ENST00000470247 TMX1Q9H3N1 280 aa12.33□□□□□ -0.44
SREBF1-209ENST00000470247 PDZD7Q9H5P4 517 aa12.33□□□□□ -0.44
SREBF1-209ENST00000470247 AGPAT5Q9NUQ2 364 aa12.33□□□□□ -0.44
SREBF1-209ENST00000470247 PCDH10Q9P2E7 1040 aa12.33□□□□□ -0.44
SREBF1-209ENST00000470247 CGNQ9P2M7 1197 aaKnown RBP12.33□□□□□ -0.44
SREBF1-209ENST00000470247 PADI3Q9ULW8 664 aa12.33□□□□□ -0.44
SREBF1-209ENST00000470247 TNFSF13BQ9Y275 285 aa12.33□□□□□ -0.44
SREBF1-209ENST00000470247 MKI67P46013 3256 aaKnown RBP12.33□□□□□ -0.44
SREBF1-209ENST00000470247 A0A0B4J269 797 aa12.32□□□□□ -0.44
SREBF1-209ENST00000470247 BICDL2A1A5D9 508 aa12.32□□□□□ -0.44
SREBF1-209ENST00000470247 IKBKBO14920 756 aa12.32□□□□□ -0.44
SREBF1-209ENST00000470247 HNRNPDLO14979 420 aaKnown RBP12.32□□□□□ -0.44
SREBF1-209ENST00000470247 FAM189A1O60320 539 aa12.32□□□□□ -0.44
SREBF1-209ENST00000470247 TOM1L1O75674 476 aa12.32□□□□□ -0.44
SREBF1-209ENST00000470247 CXCL10P02778 98 aa12.32□□□□□ -0.44
SREBF1-209ENST00000470247 SFPQP23246 707 aaKnown RBP eCLIP12.32□□□□□ -0.44
SREBF1-209ENST00000470247 CD52P31358 61 aa12.32□□□□□ -0.44
SREBF1-209ENST00000470247 LIG4P49917 911 aa12.32□□□□□ -0.44
SREBF1-209ENST00000470247 MCL1Q07820 350 aa12.32□□□□□ -0.44
SREBF1-209ENST00000470247 MYBPC2Q14324 1141 aa12.32□□□□□ -0.44
SREBF1-209ENST00000470247 TCTN1Q2MV58 587 aa12.32□□□□□ -0.44
SREBF1-209ENST00000470247 UBXN11Q5T124 520 aa12.32□□□□□ -0.44
SREBF1-209ENST00000470247 RTN4RL1Q86UN2 441 aaPredicted RBP12.32□□□□□ -0.44
SREBF1-209ENST00000470247 LUZP1Q86V48 1076 aa12.32□□□□□ -0.44
SREBF1-209ENST00000470247 TNS4Q8IZW8 715 aa12.32□□□□□ -0.44
SREBF1-209ENST00000470247 AOPEPQ8N6M6 819 aa12.32□□□□□ -0.44
SREBF1-209ENST00000470247 USP38Q8NB14 1042 aa12.32□□□□□ -0.44
SREBF1-209ENST00000470247 EEF2KMTQ96G04 330 aa12.32□□□□□ -0.44
SREBF1-209ENST00000470247 SCLYQ96I15 445 aa12.32□□□□□ -0.44
SREBF1-209ENST00000470247 FBXL18Q96ME1 805 aa12.32□□□□□ -0.44
SREBF1-209ENST00000470247 PPP1R12CQ9BZL4 782 aa12.32□□□□□ -0.44
SREBF1-209ENST00000470247 NAT10Q9H0A0 1025 aaKnown RBP12.32□□□□□ -0.44
SREBF1-209ENST00000470247 SAMSN1Q9NSI8 373 aaKnown RBP12.32□□□□□ -0.44
SREBF1-209ENST00000470247 ALPK3Q96L96 1907 aa12.32□□□□□ -0.44
SREBF1-209ENST00000470247 TET1Q8NFU7 2136 aa12.32□□□□□ -0.44
SREBF1-209ENST00000470247 GPR182O15218 404 aa12.31□□□□□ -0.44
SREBF1-209ENST00000470247 CALUO43852 315 aaPredicted RBP12.31□□□□□ -0.44
SREBF1-209ENST00000470247 MGEA5O60502 916 aa12.31□□□□□ -0.44
SREBF1-209ENST00000470247 ERLIN2O94905 339 aa12.31□□□□□ -0.44
SREBF1-209ENST00000470247 TIMP1P01033 207 aa12.31□□□□□ -0.44
SREBF1-209ENST00000470247 NR3C1P04150 777 aa12.31□□□□□ -0.44
SREBF1-209ENST00000470247 ZNF18P17022 549 aa12.31□□□□□ -0.44
SREBF1-209ENST00000470247 GARTP22102 1010 aa12.31□□□□□ -0.44
SREBF1-209ENST00000470247 AXLP30530 894 aa12.31□□□□□ -0.44
SREBF1-209ENST00000470247 CASP4P49662 377 aa12.31□□□□□ -0.44
SREBF1-209ENST00000470247 CCL23P55773 120 aa12.31□□□□□ -0.44
SREBF1-209ENST00000470247 MCCD1P59942 119 aaPredicted RBP12.31□□□□□ -0.44
SREBF1-209ENST00000470247 FKBP3Q00688 224 aaKnown RBP12.31□□□□□ -0.44
SREBF1-209ENST00000470247 MYL5Q02045 173 aa12.31□□□□□ -0.44
SREBF1-209ENST00000470247 NFX1Q12986 1120 aaKnown RBP12.31□□□□□ -0.44
SREBF1-209ENST00000470247 ADAM9Q13443 819 aa12.31□□□□□ -0.44
SREBF1-209ENST00000470247 PLEKHG4Q58EX7 1191 aa12.31□□□□□ -0.44
SREBF1-209ENST00000470247 SLFN12LQ6IEE8 588 aa12.31□□□□□ -0.44
SREBF1-209ENST00000470247 MPZL3Q6UWV2 235 aa12.31□□□□□ -0.44
SREBF1-209ENST00000470247 CRELD2Q6UXH1 353 aaPredicted RBP12.31□□□□□ -0.44
SREBF1-209ENST00000470247 HS2ST1Q7LGA3 356 aa12.31□□□□□ -0.44
SREBF1-209ENST00000470247 RNF214Q8ND24 703 aa12.31□□□□□ -0.44
SREBF1-209ENST00000470247 GOLGA5Q8TBA6 731 aa12.31□□□□□ -0.44
SREBF1-209ENST00000470247 BICD1Q96G01 975 aa12.31□□□□□ -0.44
SREBF1-209ENST00000470247 BORCS6Q96GS4 357 aa12.31□□□□□ -0.44
SREBF1-209ENST00000470247 SRRTQ9BXP5 876 aaKnown RBP12.31□□□□□ -0.44
SREBF1-209ENST00000470247 CDT1Q9H211 546 aa12.31□□□□□ -0.44
SREBF1-209ENST00000470247 PCIF1Q9H4Z3 704 aa12.31□□□□□ -0.44
SREBF1-209ENST00000470247 FANCLQ9NW38 375 aa12.31□□□□□ -0.44
SREBF1-209ENST00000470247 HSPBP1Q9NZL4 362 aa12.31□□□□□ -0.44
SREBF1-209ENST00000470247 NFE2L3Q9Y4A8 694 aa12.31□□□□□ -0.44
SREBF1-209ENST00000470247 N4BP3O15049 544 aa12.3□□□□□ -0.44
SREBF1-209ENST00000470247 CLDN3O15551 220 aa12.3□□□□□ -0.44
SREBF1-209ENST00000470247 MEFVO15553 781 aaPredicted RBP12.3□□□□□ -0.44
SREBF1-209ENST00000470247 AKAP3O75969 853 aa12.3□□□□□ -0.44
SREBF1-209ENST00000470247 NR2F2P24468 414 aa12.3□□□□□ -0.44
SREBF1-209ENST00000470247 ZBTB41Q5SVQ8 909 aa12.3□□□□□ -0.44
SREBF1-209ENST00000470247 CDKAL1Q5VV42 579 aa12.3□□□□□ -0.44
SREBF1-209ENST00000470247 ARMCX5Q6P1M9 558 aa12.3□□□□□ -0.44
SREBF1-209ENST00000470247 FILIP1Q7Z7B0 1213 aa12.3□□□□□ -0.44
SREBF1-209ENST00000470247 ZBTB33Q86T24 672 aa12.3□□□□□ -0.44
SREBF1-209ENST00000470247 CSGALNACT2Q8N6G5 542 aa12.3□□□□□ -0.44
SREBF1-209ENST00000470247 DBF4BQ8NFT6 615 aa12.3□□□□□ -0.44
SREBF1-209ENST00000470247 LINC01599Q8WXQ3 324 aa12.3□□□□□ -0.44
SREBF1-209ENST00000470247 POMGNT1Q8WZA1 660 aa12.3□□□□□ -0.44
SREBF1-209ENST00000470247 TSG101Q99816 390 aa12.3□□□□□ -0.44
SREBF1-209ENST00000470247 EIF2AQ9BY44 585 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms