RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 C2orf40Q9H1Z8 148 aa15.56■□□□□ 0.08
COMMD3-208ENST00000470045 IGFLR1Q9H665 355 aa15.56■□□□□ 0.08
COMMD3-208ENST00000470045 NGRNQ9NPE2 291 aaKnown RBP15.56■□□□□ 0.08
COMMD3-208ENST00000470045 CLEC1BQ9P126 229 aa15.56■□□□□ 0.08
COMMD3-208ENST00000470045 KANSL3Q9P2N6 904 aa15.56■□□□□ 0.08
COMMD3-208ENST00000470045 DNAJB4Q9UDY4 337 aa15.56■□□□□ 0.08
COMMD3-208ENST00000470045 NT5C1B-RDH14C9J2C7 533 aa15.55■□□□□ 0.08
COMMD3-208ENST00000470045 E9PMD0 336 aa15.55■□□□□ 0.08
COMMD3-208ENST00000470045 DDHD2O94830 711 aa15.55■□□□□ 0.08
COMMD3-208ENST00000470045 ITGA4P13612 1032 aa15.55■□□□□ 0.08
COMMD3-208ENST00000470045 PDCP20941 246 aa15.55■□□□□ 0.08
COMMD3-208ENST00000470045 SLC11A1P49279 550 aa15.55■□□□□ 0.08
COMMD3-208ENST00000470045 RNASELQ05823 741 aaKnown RBP15.55■□□□□ 0.08
COMMD3-208ENST00000470045 PLPP4Q5VZY2 271 aa15.55■□□□□ 0.08
COMMD3-208ENST00000470045 EP400NLQ6ZTU2 488 aa15.55■□□□□ 0.08
COMMD3-208ENST00000470045 RBM23Q86U06 439 aaKnown RBP15.55■□□□□ 0.08
COMMD3-208ENST00000470045 ZNF280BQ86YH2 543 aa15.55■□□□□ 0.08
COMMD3-208ENST00000470045 DAW1Q8N136 415 aa15.55■□□□□ 0.08
COMMD3-208ENST00000470045 VN1R2Q8NFZ6 395 aa15.55■□□□□ 0.08
COMMD3-208ENST00000470045 MICAL1Q8TDZ2 1067 aa15.55■□□□□ 0.08
COMMD3-208ENST00000470045 BCL7CQ8WUZ0 217 aaPredicted RBP15.55■□□□□ 0.08
COMMD3-208ENST00000470045 TMEM169Q96HH4 297 aa15.55■□□□□ 0.08
COMMD3-208ENST00000470045 INTS4Q96HW7 963 aaKnown RBP15.55■□□□□ 0.08
COMMD3-208ENST00000470045 IGSF21Q96ID5 467 aa15.55■□□□□ 0.08
COMMD3-208ENST00000470045 TMEM175Q9BSA9 504 aa15.55■□□□□ 0.08
COMMD3-208ENST00000470045 NXF3Q9H4D5 531 aaKnown RBP15.55■□□□□ 0.08
COMMD3-208ENST00000470045 TLE6Q9H808 572 aa15.55■□□□□ 0.08
COMMD3-208ENST00000470045 ENTPD7Q9NQZ7 604 aa15.55■□□□□ 0.08
COMMD3-208ENST00000470045 DNM3Q9UQ16 869 aa15.55■□□□□ 0.08
COMMD3-208ENST00000470045 HES2Q9Y543 173 aa15.55■□□□□ 0.08
COMMD3-208ENST00000470045 MYH15Q9Y2K3 1946 aa15.55■□□□□ 0.08
COMMD3-208ENST00000470045 VWA3AA6NCI4 1184 aa15.54■□□□□ 0.08
COMMD3-208ENST00000470045 TTLL13PA6NNM8 815 aa15.54■□□□□ 0.08
COMMD3-208ENST00000470045 HIDE1A8MVS5 230 aa15.54■□□□□ 0.08
COMMD3-208ENST00000470045 MBTPS2O43462 519 aa15.54■□□□□ 0.08
COMMD3-208ENST00000470045 BMP15O95972 392 aa15.54■□□□□ 0.08
COMMD3-208ENST00000470045 EDN1P05305 212 aa15.54■□□□□ 0.08
COMMD3-208ENST00000470045 MLH1P40692 756 aa15.54■□□□□ 0.08
COMMD3-208ENST00000470045 NDUFV1P49821 464 aa15.54■□□□□ 0.08
COMMD3-208ENST00000470045 DSC1Q08554 894 aa15.54■□□□□ 0.08
COMMD3-208ENST00000470045 COASYQ13057 564 aa15.54■□□□□ 0.08
COMMD3-208ENST00000470045 MAPK7Q13164 816 aa15.54■□□□□ 0.08
COMMD3-208ENST00000470045 SMAD4Q13485 552 aaKnown RBP15.54■□□□□ 0.08
COMMD3-208ENST00000470045 TMEM184AQ6ZMB5 413 aa15.54■□□□□ 0.08
COMMD3-208ENST00000470045 DDX53Q86TM3 631 aaKnown RBP15.54■□□□□ 0.08
COMMD3-208ENST00000470045 SMRP1Q8NCR6 262 aa15.54■□□□□ 0.08
COMMD3-208ENST00000470045 DEPTORQ8TB45 409 aa15.54■□□□□ 0.08
COMMD3-208ENST00000470045 PNMA5Q96PV4 448 aa15.54■□□□□ 0.08
COMMD3-208ENST00000470045 RUSC1Q9BVN2 902 aa15.54■□□□□ 0.08
COMMD3-208ENST00000470045 ZBP1Q9H171 429 aa15.54■□□□□ 0.08
COMMD3-208ENST00000470045 CD320Q9NPF0 282 aa15.54■□□□□ 0.08
COMMD3-208ENST00000470045 DAXXQ9UER7 740 aaPredicted RBP15.54■□□□□ 0.08
COMMD3-208ENST00000470045 CD207Q9UJ71 328 aa15.54■□□□□ 0.08
COMMD3-208ENST00000470045 FAM50BQ9Y247 325 aa15.54■□□□□ 0.08
COMMD3-208ENST00000470045 GIT1Q9Y2X7 761 aa15.54■□□□□ 0.08
COMMD3-208ENST00000470045 IRAK3Q9Y616 596 aa15.54■□□□□ 0.08
COMMD3-208ENST00000470045 C2orf71A6NGG8 1288 aa15.53■□□□□ 0.08
COMMD3-208ENST00000470045 ARL5CA6NH57 179 aa15.53■□□□□ 0.08
COMMD3-208ENST00000470045 K7ELQ4 463 aaPredicted RBP15.53■□□□□ 0.08
COMMD3-208ENST00000470045 ACKR2O00590 384 aa15.53■□□□□ 0.08
COMMD3-208ENST00000470045 PER2O15055 1255 aa15.53■□□□□ 0.08
COMMD3-208ENST00000470045 SLC26A4O43511 780 aa15.53■□□□□ 0.08
COMMD3-208ENST00000470045 NPTXRO95502 500 aa15.53■□□□□ 0.08
COMMD3-208ENST00000470045 PRKCBP05771 671 aa15.53■□□□□ 0.08
COMMD3-208ENST00000470045 EFNA5P52803 228 aa15.53■□□□□ 0.08
COMMD3-208ENST00000470045 SMC1AQ14683 1233 aaKnown RBP15.53■□□□□ 0.08
COMMD3-208ENST00000470045 SMAD2Q15796 467 aaKnown RBP15.53■□□□□ 0.08
COMMD3-208ENST00000470045 MAPK6Q16659 721 aa15.53■□□□□ 0.08
COMMD3-208ENST00000470045 TMEM119Q4V9L6 283 aa15.53■□□□□ 0.08
COMMD3-208ENST00000470045 RINT1Q6NUQ1 792 aa15.53■□□□□ 0.08
COMMD3-208ENST00000470045 C1orf186Q6ZWK4 172 aa15.53■□□□□ 0.08
COMMD3-208ENST00000470045 TMC7Q7Z402 723 aa15.53■□□□□ 0.08
COMMD3-208ENST00000470045 CDR2LQ86X02 465 aaPredicted RBP15.53■□□□□ 0.08
COMMD3-208ENST00000470045 HACE1Q8IYU2 909 aa15.53■□□□□ 0.08
COMMD3-208ENST00000470045 MRPL43Q8N983 215 aaKnown RBP15.53■□□□□ 0.08
COMMD3-208ENST00000470045 GSTCDQ8NEC7 633 aa15.53■□□□□ 0.08
COMMD3-208ENST00000470045 IFT74Q96LB3 600 aa15.53■□□□□ 0.08
COMMD3-208ENST00000470045 AK8Q96MA6 479 aa15.53■□□□□ 0.08
COMMD3-208ENST00000470045 GAD1Q99259 594 aa15.53■□□□□ 0.08
COMMD3-208ENST00000470045 VN1R3Q9BXE9 311 aa15.53■□□□□ 0.08
COMMD3-208ENST00000470045 TRIM6Q9C030 488 aaPredicted RBP15.53■□□□□ 0.08
COMMD3-208ENST00000470045 NT5C3AQ9H0P0 336 aa15.53■□□□□ 0.08
COMMD3-208ENST00000470045 GBP3Q9H0R5 595 aa15.53■□□□□ 0.08
COMMD3-208ENST00000470045 PDZD7Q9H5P4 517 aa15.53■□□□□ 0.08
COMMD3-208ENST00000470045 PRKAG3Q9UGI9 489 aa15.53■□□□□ 0.08
COMMD3-208ENST00000470045 BARX2Q9UMQ3 279 aaPredicted RBP15.53■□□□□ 0.08
COMMD3-208ENST00000470045 VPS37CA5D8V6 355 aaPredicted RBP15.52■□□□□ 0.08
COMMD3-208ENST00000470045 N4BP3O15049 544 aa15.52■□□□□ 0.08
COMMD3-208ENST00000470045 EFEMP2O95967 443 aa15.52■□□□□ 0.08
COMMD3-208ENST00000470045 POMCP01189 267 aa15.52■□□□□ 0.08
COMMD3-208ENST00000470045 CTSAP10619 480 aa15.52■□□□□ 0.08
COMMD3-208ENST00000470045 SYT1P21579 422 aa15.52■□□□□ 0.08
COMMD3-208ENST00000470045 GUCY2CP25092 1073 aa15.52■□□□□ 0.08
COMMD3-208ENST00000470045 SCNN1GP51170 649 aa15.52■□□□□ 0.08
COMMD3-208ENST00000470045 RBM10P98175 930 aaKnown RBP15.52■□□□□ 0.08
COMMD3-208ENST00000470045 ZP2Q05996 745 aa15.52■□□□□ 0.08
COMMD3-208ENST00000470045 PRPF4BQ13523 1007 aaKnown RBP15.52■□□□□ 0.08
COMMD3-208ENST00000470045 CLUL1Q15846 466 aa15.52■□□□□ 0.08
COMMD3-208ENST00000470045 COLGALT2Q8IYK4 626 aa15.52■□□□□ 0.08
COMMD3-208ENST00000470045 VPS52Q8N1B4 723 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms