RNA–Protein interactions for RNA: ENST00000469602.1

SRRT-208, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 376 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-208ENST00000469602 NPTXRO95502 500 aa10.72□□□□□ -0.69
SRRT-208ENST00000469602 BRD1O95696 1058 aa10.72□□□□□ -0.69
SRRT-208ENST00000469602 EDN1P05305 212 aa10.72□□□□□ -0.69
SRRT-208ENST00000469602 ITGB1P05556 798 aa10.72□□□□□ -0.69
SRRT-208ENST00000469602 ITGA4P13612 1032 aa10.72□□□□□ -0.69
SRRT-208ENST00000469602 PLS3P13797 630 aa10.72□□□□□ -0.69
SRRT-208ENST00000469602 DNAJB1P25685 340 aa10.72□□□□□ -0.69
SRRT-208ENST00000469602 DDIT3P35638 169 aa10.72□□□□□ -0.69
SRRT-208ENST00000469602 DHX8Q14562 1220 aaKnown RBP10.72□□□□□ -0.69
SRRT-208ENST00000469602 TMEM132AQ24JP5 1023 aa10.72□□□□□ -0.69
SRRT-208ENST00000469602 TIGD5Q53EQ6 642 aa10.72□□□□□ -0.69
SRRT-208ENST00000469602 RRAGBQ5VZM2 374 aa10.72□□□□□ -0.69
SRRT-208ENST00000469602 KCNT2Q6UVM3 1135 aa10.72□□□□□ -0.69
SRRT-208ENST00000469602 CCDC73Q6ZRK6 1079 aa10.72□□□□□ -0.69
SRRT-208ENST00000469602 CDR2LQ86X02 465 aaPredicted RBP10.72□□□□□ -0.69
SRRT-208ENST00000469602 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.72□□□□□ -0.69
SRRT-208ENST00000469602 THNSL1Q8IYQ7 743 aa10.72□□□□□ -0.69
SRRT-208ENST00000469602 HACE1Q8IYU2 909 aa10.72□□□□□ -0.69
SRRT-208ENST00000469602 SLC17A8Q8NDX2 589 aa10.72□□□□□ -0.69
SRRT-208ENST00000469602 SPPL3Q8TCT6 385 aa10.72□□□□□ -0.69
SRRT-208ENST00000469602 URGCPQ8TCY9 931 aa10.72□□□□□ -0.69
SRRT-208ENST00000469602 KCNG4Q8TDN1 519 aa10.72□□□□□ -0.69
SRRT-208ENST00000469602 SPIRE2Q8WWL2 714 aa10.72□□□□□ -0.69
SRRT-208ENST00000469602 LARP4BQ92615 738 aaKnown RBP10.72□□□□□ -0.69
SRRT-208ENST00000469602 ZNF558Q96NG5 402 aa10.72□□□□□ -0.69
SRRT-208ENST00000469602 REEP2Q9BRK0 252 aa10.72□□□□□ -0.69
SRRT-208ENST00000469602 NXF3Q9H4D5 531 aaKnown RBP10.72□□□□□ -0.69
SRRT-208ENST00000469602 PDZD7Q9H5P4 517 aa10.72□□□□□ -0.69
SRRT-208ENST00000469602 TMEM134Q9H6X4 195 aa10.72□□□□□ -0.69
SRRT-208ENST00000469602 TBC1D13Q9NVG8 400 aa10.72□□□□□ -0.69
SRRT-208ENST00000469602 ARHGAP28Q9P2N2 729 aa10.72□□□□□ -0.69
SRRT-208ENST00000469602 STK17AQ9UEE5 414 aa10.72□□□□□ -0.69
SRRT-208ENST00000469602 DAXXQ9UER7 740 aaPredicted RBP10.72□□□□□ -0.69
SRRT-208ENST00000469602 CFAP45Q9UL16 551 aa10.72□□□□□ -0.69
SRRT-208ENST00000469602 ODF2LQ9ULJ1 636 aa10.72□□□□□ -0.69
SRRT-208ENST00000469602 INPP5FQ9Y2H2 1132 aa10.72□□□□□ -0.69
SRRT-208ENST00000469602 HES2Q9Y543 173 aa10.72□□□□□ -0.69
SRRT-208ENST00000469602 ARL5CA6NH57 179 aa10.71□□□□□ -0.69
SRRT-208ENST00000469602 INPPL1O15357 1258 aa10.71□□□□□ -0.69
SRRT-208ENST00000469602 SLC16A4O15374 487 aa10.71□□□□□ -0.69
SRRT-208ENST00000469602 CUTAO60888 179 aa10.71□□□□□ -0.69
SRRT-208ENST00000469602 FGF18O76093 207 aa10.71□□□□□ -0.69
SRRT-208ENST00000469602 KRT18P05783 430 aaKnown RBP10.71□□□□□ -0.69
SRRT-208ENST00000469602 PPM1AP35813 382 aa10.71□□□□□ -0.69
SRRT-208ENST00000469602 AFF1P51825 1210 aaKnown RBP10.71□□□□□ -0.69
SRRT-208ENST00000469602 SMTNP53814 917 aa10.71□□□□□ -0.69
SRRT-208ENST00000469602 CACNB1Q02641 598 aaPredicted RBP10.71□□□□□ -0.69
SRRT-208ENST00000469602 UBE3AQ05086 875 aa10.71□□□□□ -0.69
SRRT-208ENST00000469602 DNM1Q05193 864 aaKnown RBP10.71□□□□□ -0.69
SRRT-208ENST00000469602 RNASELQ05823 741 aaKnown RBP10.71□□□□□ -0.69
SRRT-208ENST00000469602 CAMK1Q14012 370 aa10.71□□□□□ -0.69
SRRT-208ENST00000469602 GIT2Q14161 759 aa10.71□□□□□ -0.69
SRRT-208ENST00000469602 SKIV2LQ15477 1246 aaKnown RBP10.71□□□□□ -0.69
SRRT-208ENST00000469602 NT5DC1Q5TFE4 455 aa10.71□□□□□ -0.69
SRRT-208ENST00000469602 ATF7IP2Q5U623 682 aa10.71□□□□□ -0.69
SRRT-208ENST00000469602 RNF39Q9H2S5 420 aa10.71□□□□□ -0.69
SRRT-208ENST00000469602 NSUN3Q9H649 340 aaKnown RBP10.71□□□□□ -0.69
SRRT-208ENST00000469602 PRDM6Q9NQX0 595 aa10.71□□□□□ -0.69
SRRT-208ENST00000469602 LARSQ9P2J5 1176 aaKnown RBP10.71□□□□□ -0.69
SRRT-208ENST00000469602 KANSL3Q9P2N6 904 aa10.71□□□□□ -0.69
SRRT-208ENST00000469602 USP20Q9Y2K6 914 aa10.71□□□□□ -0.69
SRRT-208ENST00000469602 GIT1Q9Y2X7 761 aa10.71□□□□□ -0.69
SRRT-208ENST00000469602 ZDHHC9Q9Y397 364 aa10.71□□□□□ -0.69
SRRT-208ENST00000469602 CITO14578 2027 aa10.7□□□□□ -0.7
SRRT-208ENST00000469602 ZMYM2Q9UBW7 1377 aa10.7□□□□□ -0.7
SRRT-208ENST00000469602 A0A087X0B3 334 aa10.7□□□□□ -0.7
SRRT-208ENST00000469602 CARNS1A5YM72 827 aa10.7□□□□□ -0.7
SRRT-208ENST00000469602 H0YCG3 227 aa10.7□□□□□ -0.7
SRRT-208ENST00000469602 ZC3H11AO75152 810 aaKnown RBP eCLIP10.7□□□□□ -0.7
SRRT-208ENST00000469602 FAM13AO94988 1023 aa10.7□□□□□ -0.7
SRRT-208ENST00000469602 MAPTP10636 758 aaKnown RBP10.7□□□□□ -0.7
SRRT-208ENST00000469602 AKAP5P24588 427 aa10.7□□□□□ -0.7
SRRT-208ENST00000469602 PBX3P40426 434 aa10.7□□□□□ -0.7
SRRT-208ENST00000469602 MLH1P40692 756 aa10.7□□□□□ -0.7
SRRT-208ENST00000469602 STAT6P42226 847 aa10.7□□□□□ -0.7
SRRT-208ENST00000469602 ALDH7A1P49419 539 aaKnown RBP10.7□□□□□ -0.7
SRRT-208ENST00000469602 ZNF131P52739 623 aa10.7□□□□□ -0.7
SRRT-208ENST00000469602 BCAR1P56945 870 aa10.7□□□□□ -0.7
SRRT-208ENST00000469602 PLCB3Q01970 1234 aa10.7□□□□□ -0.7
SRRT-208ENST00000469602 DCAF4L1Q3SXM0 396 aa10.7□□□□□ -0.7
SRRT-208ENST00000469602 TCEAL5Q5H9L2 206 aa10.7□□□□□ -0.7
SRRT-208ENST00000469602 TAS1R3Q7RTX0 852 aa10.7□□□□□ -0.7
SRRT-208ENST00000469602 APBB1IPQ7Z5R6 666 aaPredicted RBP10.7□□□□□ -0.7
SRRT-208ENST00000469602 SLC39A11Q8N1S5 342 aa10.7□□□□□ -0.7
SRRT-208ENST00000469602 TMEM161BQ8NDZ6 487 aa10.7□□□□□ -0.7
SRRT-208ENST00000469602 POF1BQ8WVV4 589 aa10.7□□□□□ -0.7
SRRT-208ENST00000469602 ZFP42Q96MM3 310 aa10.7□□□□□ -0.7
SRRT-208ENST00000469602 GAD1Q99259 594 aa10.7□□□□□ -0.7
SRRT-208ENST00000469602 ACO2Q99798 780 aaKnown RBP10.7□□□□□ -0.7
SRRT-208ENST00000469602 ADPGKQ9BRR6 497 aa10.7□□□□□ -0.7
SRRT-208ENST00000469602 APOL6Q9BWW8 343 aa10.7□□□□□ -0.7
SRRT-208ENST00000469602 MRPL4Q9BYD3 311 aaKnown RBP10.7□□□□□ -0.7
SRRT-208ENST00000469602 PANK2Q9BZ23 570 aa10.7□□□□□ -0.7
SRRT-208ENST00000469602 PARVGQ9HBI0 331 aa10.7□□□□□ -0.7
SRRT-208ENST00000469602 SPG21Q9NZD8 308 aa10.7□□□□□ -0.7
SRRT-208ENST00000469602 THEGQ9P2T0 379 aa10.7□□□□□ -0.7
SRRT-208ENST00000469602 LZTS1Q9Y250 596 aa10.7□□□□□ -0.7
SRRT-208ENST00000469602 TNFSF13BQ9Y275 285 aa10.7□□□□□ -0.7
SRRT-208ENST00000469602 B4GALT3O60512 393 aa10.69□□□□□ -0.7
SRRT-208ENST00000469602 TBCAO75347 108 aaKnown RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms