RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 PLCB3Q01970 1234 aa5.24□□□□□ -1.57
SF3B1-207ENST00000468925 AIMP1Q12904 312 aaKnown RBP5.24□□□□□ -1.57
SF3B1-207ENST00000468925 BNIP1Q12981 228 aa5.24□□□□□ -1.57
SF3B1-207ENST00000468925 ADAM9Q13443 819 aa5.24□□□□□ -1.57
SF3B1-207ENST00000468925 ACVR2BQ13705 512 aa5.24□□□□□ -1.57
SF3B1-207ENST00000468925 SEPT6Q14141 434 aa5.24□□□□□ -1.57
SF3B1-207ENST00000468925 MEA1Q16626 185 aa5.24□□□□□ -1.57
SF3B1-207ENST00000468925 DUOXA2Q1HG44 320 aa5.24□□□□□ -1.57
SF3B1-207ENST00000468925 MUM1Q2TAK8 710 aa5.24□□□□□ -1.57
SF3B1-207ENST00000468925 GALNTL6Q49A17 601 aa5.24□□□□□ -1.57
SF3B1-207ENST00000468925 PDCD4Q53EL6 469 aaKnown RBP5.24□□□□□ -1.57
SF3B1-207ENST00000468925 CFAP157Q5JU67 520 aa5.24□□□□□ -1.57
SF3B1-207ENST00000468925 RASIP1Q5U651 963 aa5.24□□□□□ -1.57
SF3B1-207ENST00000468925 CDKAL1Q5VV42 579 aa5.24□□□□□ -1.57
SF3B1-207ENST00000468925 ANO7Q6IWH7 933 aa5.24□□□□□ -1.57
SF3B1-207ENST00000468925 BTNL9Q6UXG8 535 aa5.24□□□□□ -1.57
SF3B1-207ENST00000468925 NCCRP1Q6ZVX7 275 aaPredicted RBP5.24□□□□□ -1.57
SF3B1-207ENST00000468925 KIAA0825Q8IV33 1275 aa5.24□□□□□ -1.57
SF3B1-207ENST00000468925 UNC5CLQ8IV45 518 aa5.24□□□□□ -1.57
SF3B1-207ENST00000468925 SYCP3Q8IZU3 236 aa5.24□□□□□ -1.57
SF3B1-207ENST00000468925 ABTB2Q8N961 1025 aa5.24□□□□□ -1.57
SF3B1-207ENST00000468925 SPATA20Q8TB22 786 aa5.24□□□□□ -1.57
SF3B1-207ENST00000468925 PIGOQ8TEQ8 1089 aa5.24□□□□□ -1.57
SF3B1-207ENST00000468925 ATXN2LQ8WWM7 1075 aaKnown RBP5.24□□□□□ -1.57
SF3B1-207ENST00000468925 JDP2Q8WYK2 163 aa5.24□□□□□ -1.57
SF3B1-207ENST00000468925 WASF1Q92558 559 aa5.24□□□□□ -1.57
SF3B1-207ENST00000468925 SLC35B4Q969S0 331 aa5.24□□□□□ -1.57
SF3B1-207ENST00000468925 AZIN2Q96A70 460 aa5.24□□□□□ -1.57
SF3B1-207ENST00000468925 KLHDC7BQ96G42 594 aa5.24□□□□□ -1.57
SF3B1-207ENST00000468925 LTV1Q96GA3 475 aaPredicted RBP5.24□□□□□ -1.57
SF3B1-207ENST00000468925 PBKQ96KB5 322 aa5.24□□□□□ -1.57
SF3B1-207ENST00000468925 HHIPQ96QV1 700 aa5.24□□□□□ -1.57
SF3B1-207ENST00000468925 NUP88Q99567 741 aaPredicted RBP5.24□□□□□ -1.57
SF3B1-207ENST00000468925 DNAJC7Q99615 494 aa5.24□□□□□ -1.57
SF3B1-207ENST00000468925 ARPC5LQ9BPX5 153 aa5.24□□□□□ -1.57
SF3B1-207ENST00000468925 CORO1BQ9BR76 489 aa5.24□□□□□ -1.57
SF3B1-207ENST00000468925 PBX4Q9BYU1 374 aa5.24□□□□□ -1.57
SF3B1-207ENST00000468925 ISCUQ9H1K1 167 aa5.24□□□□□ -1.57
SF3B1-207ENST00000468925 THAP9Q9H5L6 903 aa5.24□□□□□ -1.57
SF3B1-207ENST00000468925 PHAXQ9H814 394 aaKnown RBP5.24□□□□□ -1.57
SF3B1-207ENST00000468925 PARVBQ9HBI1 364 aa5.24□□□□□ -1.57
SF3B1-207ENST00000468925 RXFP1Q9HBX9 757 aa5.24□□□□□ -1.57
SF3B1-207ENST00000468925 DDX21Q9NR30 783 aaKnown RBP eCLIP5.24□□□□□ -1.57
SF3B1-207ENST00000468925 INTS13Q9NVM9 706 aa5.24□□□□□ -1.57
SF3B1-207ENST00000468925 CYP39A1Q9NYL5 469 aa5.24□□□□□ -1.57
SF3B1-207ENST00000468925 AIPL1Q9NZN9 384 aa5.24□□□□□ -1.57
SF3B1-207ENST00000468925 DNAJB4Q9UDY4 337 aa5.24□□□□□ -1.57
SF3B1-207ENST00000468925 GUCA1BQ9UMX6 200 aa5.24□□□□□ -1.57
SF3B1-207ENST00000468925 RAXQ9Y2V3 346 aa5.24□□□□□ -1.57
SF3B1-207ENST00000468925 EID1Q9Y6B2 187 aa5.24□□□□□ -1.57
SF3B1-207ENST00000468925 KIF20BQ96Q89 1820 aa5.24□□□□□ -1.57
SF3B1-207ENST00000468925 TMEM94Q12767 1356 aa5.24□□□□□ -1.57
SF3B1-207ENST00000468925 MED23Q9ULK4 1368 aa5.24□□□□□ -1.57
SF3B1-207ENST00000468925 CLTCQ00610 1675 aaKnown RBP5.24□□□□□ -1.57
SF3B1-207ENST00000468925 BCL9O00512 1426 aa5.23□□□□□ -1.57
SF3B1-207ENST00000468925 ARAP3Q8WWN8 1544 aa5.23□□□□□ -1.57
SF3B1-207ENST00000468925 H7C1D1 291 aa5.23□□□□□ -1.57
SF3B1-207ENST00000468925 CCDC188H7C350 402 aa5.23□□□□□ -1.57
SF3B1-207ENST00000468925 MATN2O00339 956 aa5.23□□□□□ -1.57
SF3B1-207ENST00000468925 FYB1O15117 783 aa5.23□□□□□ -1.57
SF3B1-207ENST00000468925 P4HA2O15460 535 aa5.23□□□□□ -1.57
SF3B1-207ENST00000468925 ADAM11O75078 769 aa5.23□□□□□ -1.57
SF3B1-207ENST00000468925 MBD4O95243 580 aa5.23□□□□□ -1.57
SF3B1-207ENST00000468925 RAPGEF3O95398 923 aa5.23□□□□□ -1.57
SF3B1-207ENST00000468925 EYA4O95677 639 aa5.23□□□□□ -1.57
SF3B1-207ENST00000468925 CCNB1P14635 433 aa5.23□□□□□ -1.57
SF3B1-207ENST00000468925 PORP16435 677 aaPredicted RBP5.23□□□□□ -1.57
SF3B1-207ENST00000468925 EEF1GP26641 437 aaKnown RBP5.23□□□□□ -1.57
SF3B1-207ENST00000468925 STAT6P42226 847 aa5.23□□□□□ -1.57
SF3B1-207ENST00000468925 OXCT1P55809 520 aa5.23□□□□□ -1.57
SF3B1-207ENST00000468925 ARPC4P59998 168 aa5.23□□□□□ -1.57
SF3B1-207ENST00000468925 XIAPP98170 497 aa5.23□□□□□ -1.57
SF3B1-207ENST00000468925 PTH1RQ03431 593 aa5.23□□□□□ -1.57
SF3B1-207ENST00000468925 ZFYVE27Q5T4F4 411 aa5.23□□□□□ -1.57
SF3B1-207ENST00000468925 DAB2IPQ5VWQ8 1189 aa5.23□□□□□ -1.57
SF3B1-207ENST00000468925 TBC1D9BQ66K14 1250 aa5.23□□□□□ -1.57
SF3B1-207ENST00000468925 THOC7Q6I9Y2 204 aaKnown RBP5.23□□□□□ -1.57
SF3B1-207ENST00000468925 OR52E8Q6IFG1 317 aa5.23□□□□□ -1.57
SF3B1-207ENST00000468925 ZNF280DQ6N043 979 aa5.23□□□□□ -1.57
SF3B1-207ENST00000468925 FAM117BQ6P1L5 589 aa5.23□□□□□ -1.57
SF3B1-207ENST00000468925 C3orf62Q6ZUJ4 267 aa5.23□□□□□ -1.57
SF3B1-207ENST00000468925 ASRGL1Q7L266 308 aa5.23□□□□□ -1.57
SF3B1-207ENST00000468925 TBC1D1Q86TI0 1168 aaPredicted RBP5.23□□□□□ -1.57
SF3B1-207ENST00000468925 ANKRD13BQ86YJ7 626 aa5.23□□□□□ -1.57
SF3B1-207ENST00000468925 CREG2Q8IUH2 290 aa5.23□□□□□ -1.57
SF3B1-207ENST00000468925 MAP4K3Q8IVH8 894 aa5.23□□□□□ -1.57
SF3B1-207ENST00000468925 PEX5LQ8IYB4 626 aa5.23□□□□□ -1.57
SF3B1-207ENST00000468925 ST13P4Q8IZP2 240 aaPredicted RBP5.23□□□□□ -1.57
SF3B1-207ENST00000468925 ARHGAP24Q8N264 748 aa5.23□□□□□ -1.57
SF3B1-207ENST00000468925 TMEM130Q8N3G9 435 aa5.23□□□□□ -1.57
SF3B1-207ENST00000468925 C1orf127Q8N9H9 656 aa5.23□□□□□ -1.57
SF3B1-207ENST00000468925 ASAP3Q8TDY4 903 aa5.23□□□□□ -1.57
SF3B1-207ENST00000468925 RAPGEF5Q92565 580 aa5.23□□□□□ -1.57
SF3B1-207ENST00000468925 UTP4Q969X6 686 aaKnown RBP5.23□□□□□ -1.57
SF3B1-207ENST00000468925 COL26A1Q96A83 441 aa5.23□□□□□ -1.57
SF3B1-207ENST00000468925 PGM2Q96G03 612 aa5.23□□□□□ -1.57
SF3B1-207ENST00000468925 XPO6Q96QU8 1125 aaKnown RBP5.23□□□□□ -1.57
SF3B1-207ENST00000468925 POP1Q99575 1024 aaKnown RBP5.23□□□□□ -1.57
SF3B1-207ENST00000468925 TMEM109Q9BVC6 243 aa5.23□□□□□ -1.57
SF3B1-207ENST00000468925 SPATA16Q9BXB7 569 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms