RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 HNRNPH3P31942 346 aaKnown RBP20.64■□□□□ 0.89
SMC4-209ENST00000468653 CETN1Q12798 172 aa20.64■□□□□ 0.89
SMC4-209ENST00000468653 PTPN14Q15678 1187 aa20.64■□□□□ 0.89
SMC4-209ENST00000468653 KLHDC7AQ5VTJ3 777 aa20.64■□□□□ 0.89
SMC4-209ENST00000468653 ZPBP2Q6X784 338 aa20.64■□□□□ 0.89
SMC4-209ENST00000468653 LINC01465Q8N7H1 131 aa20.64■□□□□ 0.89
SMC4-209ENST00000468653 PLEKHO2Q8TD55 490 aa20.64■□□□□ 0.89
SMC4-209ENST00000468653 ZBTB45Q96K62 511 aaPredicted RBP20.64■□□□□ 0.89
SMC4-209ENST00000468653 MFSD14AQ96MC6 490 aa20.64■□□□□ 0.89
SMC4-209ENST00000468653 INO80B-WBP1J3KQ70 363 aa20.63■□□□□ 0.89
SMC4-209ENST00000468653 MSCO60682 206 aa20.63■□□□□ 0.89
SMC4-209ENST00000468653 TRPA1O75762 1119 aa20.63■□□□□ 0.89
SMC4-209ENST00000468653 UCHL3P15374 230 aa20.63■□□□□ 0.89
SMC4-209ENST00000468653 IRX5P78411 483 aaPredicted RBP20.63■□□□□ 0.89
SMC4-209ENST00000468653 CDK17Q00537 523 aa20.63■□□□□ 0.89
SMC4-209ENST00000468653 BEX3Q00994 111 aa20.63■□□□□ 0.89
SMC4-209ENST00000468653 CYP24A1Q07973 514 aa20.63■□□□□ 0.89
SMC4-209ENST00000468653 PPP3CAQ08209 521 aa20.63■□□□□ 0.89
SMC4-209ENST00000468653 KIAA0753Q2KHM9 967 aa20.63■□□□□ 0.89
SMC4-209ENST00000468653 TRPV1Q8NER1 839 aa20.63■□□□□ 0.89
SMC4-209ENST00000468653 TMC2Q8TDI7 906 aa20.63■□□□□ 0.89
SMC4-209ENST00000468653 CCDC127Q96BQ5 260 aa20.63■□□□□ 0.89
SMC4-209ENST00000468653 MAP7D2Q96T17 732 aa20.63■□□□□ 0.89
SMC4-209ENST00000468653 MSTO1Q9BUK6 570 aa20.63■□□□□ 0.89
SMC4-209ENST00000468653 INO80BQ9C086 356 aaPredicted RBP20.63■□□□□ 0.89
SMC4-209ENST00000468653 SETD4Q9NVD3 440 aa20.63■□□□□ 0.89
SMC4-209ENST00000468653 ADGRG1Q9Y653 693 aa20.63■□□□□ 0.89
SMC4-209ENST00000468653 ZSWIM8A7E2V4 1837 aa20.63■□□□□ 0.89
SMC4-209ENST00000468653 SIP14410 1827 aa20.63■□□□□ 0.89
SMC4-209ENST00000468653 P4HA2O15460 535 aa20.62■□□□□ 0.89
SMC4-209ENST00000468653 EDN1P05305 212 aa20.62■□□□□ 0.89
SMC4-209ENST00000468653 CYBAP13498 195 aa20.62■□□□□ 0.89
SMC4-209ENST00000468653 PHKA2P46019 1235 aa20.62■□□□□ 0.89
SMC4-209ENST00000468653 GCLMP48507 274 aa20.62■□□□□ 0.89
SMC4-209ENST00000468653 PTENP60484 403 aa20.62■□□□□ 0.89
SMC4-209ENST00000468653 MFSD10Q14728 455 aa20.62■□□□□ 0.89
SMC4-209ENST00000468653 SFMBT2Q5VUG0 894 aa20.62■□□□□ 0.89
SMC4-209ENST00000468653 TRIM65Q6PJ69 517 aa20.62■□□□□ 0.89
SMC4-209ENST00000468653 PARD3BQ8TEW8 1205 aa20.62■□□□□ 0.89
SMC4-209ENST00000468653 KAT2BQ92831 832 aa20.62■□□□□ 0.89
SMC4-209ENST00000468653 EVPLQ92817 2033 aa20.62■□□□□ 0.89
SMC4-209ENST00000468653 A0A0B4J269 797 aa20.62■□□□□ 0.89
SMC4-209ENST00000468653 CLDN3O15551 220 aa20.62■□□□□ 0.89
SMC4-209ENST00000468653 DUSP11O75319 330 aaKnown RBP20.62■□□□□ 0.89
SMC4-209ENST00000468653 LDHAP00338 332 aaKnown RBP20.62■□□□□ 0.89
SMC4-209ENST00000468653 SMIM10L2AP0DMW4 78 aa20.62■□□□□ 0.89
SMC4-209ENST00000468653 SMIM10L2BP0DMW5 78 aa20.62■□□□□ 0.89
SMC4-209ENST00000468653 TNNT1P13805 278 aa20.62■□□□□ 0.89
SMC4-209ENST00000468653 MCCD1P59942 119 aaPredicted RBP20.62■□□□□ 0.89
SMC4-209ENST00000468653 POU5F1BQ06416 359 aa20.62■□□□□ 0.89
SMC4-209ENST00000468653 FSCN1Q16658 493 aaKnown RBP20.62■□□□□ 0.89
SMC4-209ENST00000468653 C1orf220Q5T0J3 134 aa20.62■□□□□ 0.89
SMC4-209ENST00000468653 MARCH8Q5T0T0 291 aa20.62■□□□□ 0.89
SMC4-209ENST00000468653 DPY19L2P1Q6NXN4 242 aa20.62■□□□□ 0.89
SMC4-209ENST00000468653 REXO1L1PQ8IX06 675 aa20.62■□□□□ 0.89
SMC4-209ENST00000468653 SYN2Q92777 582 aaPredicted RBP20.62■□□□□ 0.89
SMC4-209ENST00000468653 SPAG5Q96R06 1193 aa20.62■□□□□ 0.89
SMC4-209ENST00000468653 TCHPQ9BT92 498 aa20.62■□□□□ 0.89
SMC4-209ENST00000468653 INTS2Q9H0H0 1204 aaKnown RBP20.62■□□□□ 0.89
SMC4-209ENST00000468653 NHEJ1Q9H9Q4 299 aaPredicted RBP20.62■□□□□ 0.89
SMC4-209ENST00000468653 SIX2Q9NPC8 291 aa20.62■□□□□ 0.89
SMC4-209ENST00000468653 RNF186Q9NXI6 227 aa20.62■□□□□ 0.89
SMC4-209ENST00000468653 EPN1Q9Y6I3 576 aaPredicted RBP20.62■□□□□ 0.89
SMC4-209ENST00000468653 NRCAMQ92823 1304 aa20.61■□□□□ 0.89
SMC4-209ENST00000468653 GOLGA6L9A6NEM1 432 aa20.61■□□□□ 0.89
SMC4-209ENST00000468653 NDUFA10O95299 355 aa20.61■□□□□ 0.89
SMC4-209ENST00000468653 VTNP04004 478 aa20.61■□□□□ 0.89
SMC4-209ENST00000468653 CYLC1P35663 651 aaPredicted RBP20.61■□□□□ 0.89
SMC4-209ENST00000468653 MAP2K2P36507 400 aa20.61■□□□□ 0.89
SMC4-209ENST00000468653 PSEN2P49810 448 aa20.61■□□□□ 0.89
SMC4-209ENST00000468653 RAPGEF1Q13905 1077 aa20.61■□□□□ 0.89
SMC4-209ENST00000468653 TMEM132AQ24JP5 1023 aa20.61■□□□□ 0.89
SMC4-209ENST00000468653 CCDC170Q8IYT3 715 aa20.61■□□□□ 0.89
SMC4-209ENST00000468653 ACO2Q99798 780 aaKnown RBP20.61■□□□□ 0.89
SMC4-209ENST00000468653 CFHR5Q9BXR6 569 aa20.61■□□□□ 0.89
SMC4-209ENST00000468653 NFKBIZQ9BYH8 718 aa20.61■□□□□ 0.89
SMC4-209ENST00000468653 HAPLN2Q9GZV7 340 aa20.61■□□□□ 0.89
SMC4-209ENST00000468653 FBXL5Q9UKA1 691 aa20.61■□□□□ 0.89
SMC4-209ENST00000468653 FHOD1Q9Y613 1164 aa20.61■□□□□ 0.89
SMC4-209ENST00000468653 A0A087WZ62 844 aa20.6■□□□□ 0.89
SMC4-209ENST00000468653 LRRIQ3A6PVS8 624 aaPredicted RBP20.6■□□□□ 0.89
SMC4-209ENST00000468653 ACKR2O00590 384 aa20.6■□□□□ 0.89
SMC4-209ENST00000468653 TOM1L1O75674 476 aa20.6■□□□□ 0.89
SMC4-209ENST00000468653 HARSP12081 509 aaKnown RBP20.6■□□□□ 0.89
SMC4-209ENST00000468653 ACOT2P49753 483 aa20.6■□□□□ 0.89
SMC4-209ENST00000468653 MXI1P50539 228 aa20.6■□□□□ 0.89
SMC4-209ENST00000468653 NLRP11P59045 1033 aaKnown RBP20.6■□□□□ 0.89
SMC4-209ENST00000468653 ENPEPQ07075 957 aa20.6■□□□□ 0.89
SMC4-209ENST00000468653 PRPF4BQ13523 1007 aaKnown RBP20.6■□□□□ 0.89
SMC4-209ENST00000468653 NFRKBQ6P4R8 1299 aa20.6■□□□□ 0.89
SMC4-209ENST00000468653 NYAP1Q6ZVC0 841 aa20.6■□□□□ 0.89
SMC4-209ENST00000468653 EHBP1Q8NDI1 1231 aa20.6■□□□□ 0.89
SMC4-209ENST00000468653 LMBR1Q8WVP7 490 aa20.6■□□□□ 0.89
SMC4-209ENST00000468653 CCDC42Q96M95 316 aa20.6■□□□□ 0.89
SMC4-209ENST00000468653 SCLT1Q96NL6 688 aa20.6■□□□□ 0.89
SMC4-209ENST00000468653 PPP1R16BQ96T49 567 aa20.6■□□□□ 0.89
SMC4-209ENST00000468653 FDXACB1Q9BRP7 624 aaPredicted RBP20.6■□□□□ 0.89
SMC4-209ENST00000468653 TMEM117Q9H0C3 514 aa20.6■□□□□ 0.89
SMC4-209ENST00000468653 FZD8Q9H461 694 aa20.6■□□□□ 0.89
SMC4-209ENST00000468653 TTLL13PA6NNM8 815 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms