RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 AMHR2Q16671 573 aa9.01□□□□□ -0.97
BRCA1-208ENST00000468300 ZBTB41Q5SVQ8 909 aa9.01□□□□□ -0.97
BRCA1-208ENST00000468300 HS2ST1Q7LGA3 356 aa9.01□□□□□ -0.97
BRCA1-208ENST00000468300 SAAL1Q96ER3 474 aa9.01□□□□□ -0.97
BRCA1-208ENST00000468300 MFSD14AQ96MC6 490 aa9.01□□□□□ -0.97
BRCA1-208ENST00000468300 PTPRHQ9HD43 1115 aa9.01□□□□□ -0.97
BRCA1-208ENST00000468300 PHLPP2Q6ZVD8 1323 aa9.01□□□□□ -0.97
BRCA1-208ENST00000468300 GOLGA8IPA6NC78 632 aa9.01□□□□□ -0.97
BRCA1-208ENST00000468300 LRRIQ4A6NIV6 560 aa9.01□□□□□ -0.97
BRCA1-208ENST00000468300 SOWAHDA6NJG2 315 aa9.01□□□□□ -0.97
BRCA1-208ENST00000468300 GOLGA8JA6NMD2 632 aa9.01□□□□□ -0.97
BRCA1-208ENST00000468300 AFPP02771 609 aaKnown RBP9.01□□□□□ -0.97
BRCA1-208ENST00000468300 TRIM49P0CI25 452 aa9.01□□□□□ -0.97
BRCA1-208ENST00000468300 TRIM49CP0CI26 452 aa9.01□□□□□ -0.97
BRCA1-208ENST00000468300 EPB41P11171 864 aaKnown RBP9.01□□□□□ -0.97
BRCA1-208ENST00000468300 ACTN1P12814 892 aa9.01□□□□□ -0.97
BRCA1-208ENST00000468300 SLC9A1P19634 815 aa9.01□□□□□ -0.97
BRCA1-208ENST00000468300 PROZP22891 400 aa9.01□□□□□ -0.97
BRCA1-208ENST00000468300 PON1P27169 355 aa9.01□□□□□ -0.97
BRCA1-208ENST00000468300 CCND3P30281 292 aaPredicted RBP9.01□□□□□ -0.97
BRCA1-208ENST00000468300 PURAQ00577 322 aaKnown RBP9.01□□□□□ -0.97
BRCA1-208ENST00000468300 MBTD1Q05BQ5 628 aa9.01□□□□□ -0.97
BRCA1-208ENST00000468300 BFSP1Q12934 665 aa9.01□□□□□ -0.97
BRCA1-208ENST00000468300 GRIK4Q16099 956 aa9.01□□□□□ -0.97
BRCA1-208ENST00000468300 MAP3K21Q5TCX8 1036 aa9.01□□□□□ -0.97
BRCA1-208ENST00000468300 CCSAPQ6IQ19 270 aaPredicted RBP9.01□□□□□ -0.97
BRCA1-208ENST00000468300 KIAA0319LQ8IZA0 1049 aa9.01□□□□□ -0.97
BRCA1-208ENST00000468300 XXYLT1Q8NBI6 393 aa9.01□□□□□ -0.97
BRCA1-208ENST00000468300 RDH13Q8NBN7 331 aa9.01□□□□□ -0.97
BRCA1-208ENST00000468300 CD99L2Q8TCZ2 262 aa9.01□□□□□ -0.97
BRCA1-208ENST00000468300 LMBR1Q8WVP7 490 aa9.01□□□□□ -0.97
BRCA1-208ENST00000468300 NFKBIZQ9BYH8 718 aa9.01□□□□□ -0.97
BRCA1-208ENST00000468300 FZD8Q9H461 694 aa9.01□□□□□ -0.97
BRCA1-208ENST00000468300 METTL14Q9HCE5 456 aaKnown RBP9.01□□□□□ -0.97
BRCA1-208ENST00000468300 MEFVO15553 781 aaPredicted RBP9□□□□□ -0.97
BRCA1-208ENST00000468300 STX10O60499 249 aa9□□□□□ -0.97
BRCA1-208ENST00000468300 SMIM10L2AP0DMW4 78 aa9□□□□□ -0.97
BRCA1-208ENST00000468300 SMIM10L2BP0DMW5 78 aa9□□□□□ -0.97
BRCA1-208ENST00000468300 HNRNPH3P31942 346 aaKnown RBP9□□□□□ -0.97
BRCA1-208ENST00000468300 GJA9P57773 515 aa9□□□□□ -0.97
BRCA1-208ENST00000468300 IGBP1P78318 339 aa9□□□□□ -0.97
BRCA1-208ENST00000468300 TRIM14Q14142 442 aa9□□□□□ -0.97
BRCA1-208ENST00000468300 MXD4Q14582 209 aaPredicted RBP9□□□□□ -0.97
BRCA1-208ENST00000468300 SCARA3Q6AZY7 606 aa9□□□□□ -0.97
BRCA1-208ENST00000468300 TOGARAM2Q6ZUX3 1019 aa9□□□□□ -0.97
BRCA1-208ENST00000468300 IFNLR1Q8IU57 520 aaPredicted RBP9□□□□□ -0.97
BRCA1-208ENST00000468300 RHPN2Q8IUC4 686 aa9□□□□□ -0.97
BRCA1-208ENST00000468300 TCP11Q8WWU5 503 aa9□□□□□ -0.97
BRCA1-208ENST00000468300 ZNF668Q96K58 619 aaPredicted RBP9□□□□□ -0.97
BRCA1-208ENST00000468300 CHP1Q99653 195 aa9□□□□□ -0.97
BRCA1-208ENST00000468300 BAG1Q99933 345 aaPredicted RBP9□□□□□ -0.97
BRCA1-208ENST00000468300 CRACR2AQ9BSW2 395 aa9□□□□□ -0.97
BRCA1-208ENST00000468300 NAA15Q9BXJ9 866 aaKnown RBP9□□□□□ -0.97
BRCA1-208ENST00000468300 SETD4Q9NVD3 440 aa9□□□□□ -0.97
BRCA1-208ENST00000468300 A0A0B4J269 797 aa9□□□□□ -0.97
BRCA1-208ENST00000468300 A0A0U1RQJ8 604 aa9□□□□□ -0.97
BRCA1-208ENST00000468300 EXOC3O60645 756 aa9□□□□□ -0.97
BRCA1-208ENST00000468300 ADAMTS4O75173 837 aa9□□□□□ -0.97
BRCA1-208ENST00000468300 DUSP11O75319 330 aaKnown RBP9□□□□□ -0.97
BRCA1-208ENST00000468300 SRGAP2CP0DJJ0 459 aa9□□□□□ -0.97
BRCA1-208ENST00000468300 AKR1A1P14550 325 aa9□□□□□ -0.97
BRCA1-208ENST00000468300 ELNP15502 786 aa9□□□□□ -0.97
BRCA1-208ENST00000468300 GARTP22102 1010 aa9□□□□□ -0.97
BRCA1-208ENST00000468300 PTENP60484 403 aa9□□□□□ -0.97
BRCA1-208ENST00000468300 CLDN10P78369 228 aa9□□□□□ -0.97
BRCA1-208ENST00000468300 NOLC1Q14978 699 aaKnown RBP eCLIP9□□□□□ -0.97
BRCA1-208ENST00000468300 PPP2R5AQ15172 486 aa9□□□□□ -0.97
BRCA1-208ENST00000468300 SNRNP35Q16560 246 aaKnown RBP9□□□□□ -0.97
BRCA1-208ENST00000468300 KIAA0753Q2KHM9 967 aa9□□□□□ -0.97
BRCA1-208ENST00000468300 RUFY4Q6ZNE9 571 aa9□□□□□ -0.97
BRCA1-208ENST00000468300 RNF149Q8NC42 400 aa9□□□□□ -0.97
BRCA1-208ENST00000468300 ATRIPQ8WXE1 791 aa9□□□□□ -0.97
BRCA1-208ENST00000468300 PSPC1Q8WXF1 523 aaKnown RBP9□□□□□ -0.97
BRCA1-208ENST00000468300 KAT6AQ92794 2004 aa9□□□□□ -0.97
BRCA1-208ENST00000468300 TARS2Q9BW92 718 aaKnown RBP9□□□□□ -0.97
BRCA1-208ENST00000468300 FAM207AQ9NSI2 230 aaPredicted RBP9□□□□□ -0.97
BRCA1-208ENST00000468300 GEMIN8Q9NWZ8 242 aaKnown RBP9□□□□□ -0.97
BRCA1-208ENST00000468300 GTPBP10A4D1E9 387 aaKnown RBP9□□□□□ -0.97
BRCA1-208ENST00000468300 K7ERI5 159 aa9□□□□□ -0.97
BRCA1-208ENST00000468300 PES1O00541 588 aaKnown RBP9□□□□□ -0.97
BRCA1-208ENST00000468300 B4GALT5O43286 388 aa9□□□□□ -0.97
BRCA1-208ENST00000468300 CLCN1P35523 988 aa9□□□□□ -0.97
BRCA1-208ENST00000468300 KRT9P35527 623 aa9□□□□□ -0.97
BRCA1-208ENST00000468300 FMO5P49326 533 aa9□□□□□ -0.97
BRCA1-208ENST00000468300 DCAF17Q5H9S7 520 aaPredicted RBP9□□□□□ -0.97
BRCA1-208ENST00000468300 FKBP15Q5T1M5 1219 aa9□□□□□ -0.97
BRCA1-208ENST00000468300 PPFIBP1Q86W92 1011 aa9□□□□□ -0.97
BRCA1-208ENST00000468300 CNGA4Q8IV77 575 aa9□□□□□ -0.97
BRCA1-208ENST00000468300 OLIG1Q8TAK6 271 aa9□□□□□ -0.97
BRCA1-208ENST00000468300 CXorf38Q8TB03 319 aa9□□□□□ -0.97
BRCA1-208ENST00000468300 DEPTORQ8TB45 409 aa9□□□□□ -0.97
BRCA1-208ENST00000468300 ZNF516Q92618 1163 aa9□□□□□ -0.97
BRCA1-208ENST00000468300 POP1Q99575 1024 aaKnown RBP9□□□□□ -0.97
BRCA1-208ENST00000468300 ACO2Q99798 780 aaKnown RBP9□□□□□ -0.97
BRCA1-208ENST00000468300 GPR88Q9GZN0 384 aa9□□□□□ -0.97
BRCA1-208ENST00000468300 ADAMTS10Q9H324 1103 aa9□□□□□ -0.97
BRCA1-208ENST00000468300 SRRDQ9UH36 339 aa9□□□□□ -0.97
BRCA1-208ENST00000468300 ZNF215Q9UL58 517 aaPredicted RBP9□□□□□ -0.97
BRCA1-208ENST00000468300 EXOC7Q9UPT5 735 aa9□□□□□ -0.97
BRCA1-208ENST00000468300 FRMD4BQ9Y2L6 1034 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms