RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 SPECC1Q5M775 1068 aa12.75□□□□□ -0.37
CDHR3-205ENST00000468143 HYIQ5T013 277 aa12.75□□□□□ -0.37
CDHR3-205ENST00000468143 PTCRAQ6ISU1 281 aaPredicted RBP12.75□□□□□ -0.37
CDHR3-205ENST00000468143 SLC27A1Q6PCB7 646 aa12.75□□□□□ -0.37
CDHR3-205ENST00000468143 PPP4R3CPQ6ZMV5 832 aa12.75□□□□□ -0.37
CDHR3-205ENST00000468143 C1orf186Q6ZWK4 172 aa12.75□□□□□ -0.37
CDHR3-205ENST00000468143 TMC7Q7Z402 723 aa12.75□□□□□ -0.37
CDHR3-205ENST00000468143 DAW1Q8N136 415 aa12.75□□□□□ -0.37
CDHR3-205ENST00000468143 SPRYD3Q8NCJ5 442 aa12.75□□□□□ -0.37
CDHR3-205ENST00000468143 BCL7CQ8WUZ0 217 aaPredicted RBP12.75□□□□□ -0.37
CDHR3-205ENST00000468143 SNX21Q969T3 373 aa12.75□□□□□ -0.37
CDHR3-205ENST00000468143 CCDC51Q96ER9 411 aa12.75□□□□□ -0.37
CDHR3-205ENST00000468143 ZFP42Q96MM3 310 aa12.75□□□□□ -0.37
CDHR3-205ENST00000468143 FAM193BQ96PV7 902 aaPredicted RBP12.75□□□□□ -0.37
CDHR3-205ENST00000468143 KIAA1671Q9BY89 1806 aa12.75□□□□□ -0.37
CDHR3-205ENST00000468143 C2orf40Q9H1Z8 148 aa12.75□□□□□ -0.37
CDHR3-205ENST00000468143 ENTPD7Q9NQZ7 604 aa12.75□□□□□ -0.37
CDHR3-205ENST00000468143 PARP2Q9UGN5 583 aa12.75□□□□□ -0.37
CDHR3-205ENST00000468143 MTMR6Q9Y217 621 aa12.75□□□□□ -0.37
CDHR3-205ENST00000468143 LZTS1Q9Y250 596 aa12.75□□□□□ -0.37
CDHR3-205ENST00000468143 CNTNAP2Q9UHC6 1331 aa12.74□□□□□ -0.37
CDHR3-205ENST00000468143 ARL5CA6NH57 179 aa12.74□□□□□ -0.37
CDHR3-205ENST00000468143 TNFRSF10AO00220 468 aa12.74□□□□□ -0.37
CDHR3-205ENST00000468143 ACKR2O00590 384 aa12.74□□□□□ -0.37
CDHR3-205ENST00000468143 TBX10O75333 385 aa12.74□□□□□ -0.37
CDHR3-205ENST00000468143 ALDH2P05091 517 aa12.74□□□□□ -0.37
CDHR3-205ENST00000468143 PLA2G4BP0C869 781 aa12.74□□□□□ -0.37
CDHR3-205ENST00000468143 MARCKSP29966 332 aaPredicted RBP12.74□□□□□ -0.37
CDHR3-205ENST00000468143 UBA7P41226 1012 aa12.74□□□□□ -0.37
CDHR3-205ENST00000468143 NDUFV1P49821 464 aa12.74□□□□□ -0.37
CDHR3-205ENST00000468143 SCNN1GP51170 649 aa12.74□□□□□ -0.37
CDHR3-205ENST00000468143 CACNB1Q02641 598 aaPredicted RBP12.74□□□□□ -0.37
CDHR3-205ENST00000468143 COL19A1Q14993 1142 aa12.74□□□□□ -0.37
CDHR3-205ENST00000468143 FOXD4L5Q5VV16 416 aaPredicted RBP12.74□□□□□ -0.37
CDHR3-205ENST00000468143 EEF1DP3Q658K8 133 aa12.74□□□□□ -0.37
CDHR3-205ENST00000468143 HSCBQ8IWL3 235 aa12.74□□□□□ -0.37
CDHR3-205ENST00000468143 SYT2Q8N9I0 419 aaPredicted RBP12.74□□□□□ -0.37
CDHR3-205ENST00000468143 FOXD4L4Q8WXT5 416 aaPredicted RBP12.74□□□□□ -0.37
CDHR3-205ENST00000468143 AUTS2Q8WXX7 1259 aa12.74□□□□□ -0.37
CDHR3-205ENST00000468143 PPP2R3CQ969Q6 453 aa12.74□□□□□ -0.37
CDHR3-205ENST00000468143 TMEM169Q96HH4 297 aa12.74□□□□□ -0.37
CDHR3-205ENST00000468143 PRIMPOLQ96LW4 560 aa12.74□□□□□ -0.37
CDHR3-205ENST00000468143 CCDC113Q9H0I3 377 aa12.74□□□□□ -0.37
CDHR3-205ENST00000468143 NT5C3AQ9H0P0 336 aa12.74□□□□□ -0.37
CDHR3-205ENST00000468143 PDZD7Q9H5P4 517 aa12.74□□□□□ -0.37
CDHR3-205ENST00000468143 UBN1Q9NPG3 1134 aa12.74□□□□□ -0.37
CDHR3-205ENST00000468143 KANSL3Q9P2N6 904 aa12.74□□□□□ -0.37
CDHR3-205ENST00000468143 GRXCR2A6NFK2 248 aa12.73□□□□□ -0.37
CDHR3-205ENST00000468143 K7ERI5 159 aa12.73□□□□□ -0.37
CDHR3-205ENST00000468143 NRP1O14786 923 aa12.73□□□□□ -0.37
CDHR3-205ENST00000468143 STX6O43752 255 aa12.73□□□□□ -0.37
CDHR3-205ENST00000468143 CXCL14O95715 111 aa12.73□□□□□ -0.37
CDHR3-205ENST00000468143 BMP15O95972 392 aa12.73□□□□□ -0.37
CDHR3-205ENST00000468143 LONP1P36776 959 aaKnown RBP12.73□□□□□ -0.37
CDHR3-205ENST00000468143 OR1G1P47890 313 aa12.73□□□□□ -0.37
CDHR3-205ENST00000468143 NPTX2P47972 431 aa12.73□□□□□ -0.37
CDHR3-205ENST00000468143 MAPK7Q13164 816 aa12.73□□□□□ -0.37
CDHR3-205ENST00000468143 KARSQ15046 597 aaKnown RBP12.73□□□□□ -0.37
CDHR3-205ENST00000468143 PTPAQ15257 358 aa12.73□□□□□ -0.37
CDHR3-205ENST00000468143 FAM187BQ17R55 369 aa12.73□□□□□ -0.37
CDHR3-205ENST00000468143 TMEM119Q4V9L6 283 aa12.73□□□□□ -0.37
CDHR3-205ENST00000468143 NT5DC1Q5TFE4 455 aa12.73□□□□□ -0.37
CDHR3-205ENST00000468143 LLGL2Q6P1M3 1020 aa12.73□□□□□ -0.37
CDHR3-205ENST00000468143 VPS52Q8N1B4 723 aa12.73□□□□□ -0.37
CDHR3-205ENST00000468143 EFHBQ8N7U6 833 aa12.73□□□□□ -0.37
CDHR3-205ENST00000468143 RASSF8Q8NHQ8 419 aa12.73□□□□□ -0.37
CDHR3-205ENST00000468143 LRRC15Q8TF66 581 aa12.73□□□□□ -0.37
CDHR3-205ENST00000468143 RABGGTAQ92696 567 aa12.73□□□□□ -0.37
CDHR3-205ENST00000468143 CALML4Q96GE6 196 aa12.73□□□□□ -0.37
CDHR3-205ENST00000468143 IGSF21Q96ID5 467 aa12.73□□□□□ -0.37
CDHR3-205ENST00000468143 AK8Q96MA6 479 aa12.73□□□□□ -0.37
CDHR3-205ENST00000468143 CXCL16Q9H2A7 254 aa12.73□□□□□ -0.37
CDHR3-205ENST00000468143 KMT5AQ9NQR1 393 aa12.73□□□□□ -0.37
CDHR3-205ENST00000468143 SNTG2Q9NY99 539 aa12.73□□□□□ -0.37
CDHR3-205ENST00000468143 CLEC1BQ9P126 229 aa12.73□□□□□ -0.37
CDHR3-205ENST00000468143 BARX2Q9UMQ3 279 aaPredicted RBP12.73□□□□□ -0.37
CDHR3-205ENST00000468143 FAN1Q9Y2M0 1017 aa12.73□□□□□ -0.37
CDHR3-205ENST00000468143 N4BP3O15049 544 aa12.72□□□□□ -0.37
CDHR3-205ENST00000468143 SLC16A4O15374 487 aa12.72□□□□□ -0.37
CDHR3-205ENST00000468143 GLP2RO95838 553 aa12.72□□□□□ -0.37
CDHR3-205ENST00000468143 HSP90AA1P07900 732 aaKnown RBP12.72□□□□□ -0.37
CDHR3-205ENST00000468143 EFNA5P52803 228 aa12.72□□□□□ -0.37
CDHR3-205ENST00000468143 SLC12A3P55017 1021 aa12.72□□□□□ -0.37
CDHR3-205ENST00000468143 DUSP6Q16828 381 aa12.72□□□□□ -0.37
CDHR3-205ENST00000468143 ARSHQ5FYA8 562 aa12.72□□□□□ -0.37
CDHR3-205ENST00000468143 PDE12Q6L8Q7 609 aaKnown RBP12.72□□□□□ -0.37
CDHR3-205ENST00000468143 USP49Q70CQ1 688 aa12.72□□□□□ -0.37
CDHR3-205ENST00000468143 DDX53Q86TM3 631 aaKnown RBP12.72□□□□□ -0.37
CDHR3-205ENST00000468143 COLGALT2Q8IYK4 626 aa12.72□□□□□ -0.37
CDHR3-205ENST00000468143 HACE1Q8IYU2 909 aa12.72□□□□□ -0.37
CDHR3-205ENST00000468143 MRPL43Q8N983 215 aaKnown RBP12.72□□□□□ -0.37
CDHR3-205ENST00000468143 GSTCDQ8NEC7 633 aa12.72□□□□□ -0.37
CDHR3-205ENST00000468143 VN1R2Q8NFZ6 395 aa12.72□□□□□ -0.37
CDHR3-205ENST00000468143 RSPH1Q8WYR4 309 aa12.72□□□□□ -0.37
CDHR3-205ENST00000468143 EPSTI1Q96J88 318 aa12.72□□□□□ -0.37
CDHR3-205ENST00000468143 DRC1Q96MC2 740 aa12.72□□□□□ -0.37
CDHR3-205ENST00000468143 CLIC6Q96NY7 704 aa12.72□□□□□ -0.37
CDHR3-205ENST00000468143 USP28Q96RU2 1077 aa12.72□□□□□ -0.37
CDHR3-205ENST00000468143 NGRNQ9NPE2 291 aaKnown RBP12.72□□□□□ -0.37
CDHR3-205ENST00000468143 GIT1Q9Y2X7 761 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms