RNA–Protein interactions for RNA: ENST00000467789.5

SSR3-205, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2 BASIC

Gene SSR3, Length 1,039 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-205ENST00000467789 NCLP19338 710 aaKnown RBP11.5□□□□□ -0.57
SSR3-205ENST00000467789 HOXA11P31270 313 aaPredicted RBP11.5□□□□□ -0.57
SSR3-205ENST00000467789 SSTR3P32745 418 aaPredicted RBP11.5□□□□□ -0.57
SSR3-205ENST00000467789 GTF2F1P35269 517 aaKnown RBP eCLIP11.5□□□□□ -0.57
SSR3-205ENST00000467789 TECP42680 631 aa11.5□□□□□ -0.57
SSR3-205ENST00000467789 RNASELQ05823 741 aaKnown RBP11.5□□□□□ -0.57
SSR3-205ENST00000467789 ZP2Q05996 745 aa11.5□□□□□ -0.57
SSR3-205ENST00000467789 DLX2Q07687 328 aaPredicted RBP11.5□□□□□ -0.57
SSR3-205ENST00000467789 SMC1AQ14683 1233 aaKnown RBP11.5□□□□□ -0.57
SSR3-205ENST00000467789 RBM23Q86U06 439 aaKnown RBP11.5□□□□□ -0.57
SSR3-205ENST00000467789 HACE1Q8IYU2 909 aa11.5□□□□□ -0.57
SSR3-205ENST00000467789 ZNF454Q8N9F8 522 aa11.5□□□□□ -0.57
SSR3-205ENST00000467789 PIGOQ8TEQ8 1089 aa11.5□□□□□ -0.57
SSR3-205ENST00000467789 PRIMPOLQ96LW4 560 aa11.5□□□□□ -0.57
SSR3-205ENST00000467789 RSAD1Q9HA92 442 aa11.5□□□□□ -0.57
SSR3-205ENST00000467789 TBC1D13Q9NVG8 400 aa11.5□□□□□ -0.57
SSR3-205ENST00000467789 CLEC1BQ9P126 229 aa11.5□□□□□ -0.57
SSR3-205ENST00000467789 IRAK3Q9Y616 596 aa11.5□□□□□ -0.57
SSR3-205ENST00000467789 ZMYM2Q9UBW7 1377 aa11.5□□□□□ -0.57
SSR3-205ENST00000467789 INPPL1O15357 1258 aa11.49□□□□□ -0.57
SSR3-205ENST00000467789 TSPAN1O60635 241 aa11.49□□□□□ -0.57
SSR3-205ENST00000467789 GPR37L1O60883 481 aa11.49□□□□□ -0.57
SSR3-205ENST00000467789 ZC3H11AO75152 810 aaKnown RBP eCLIP11.49□□□□□ -0.57
SSR3-205ENST00000467789 CSPG5O95196 566 aa11.49□□□□□ -0.57
SSR3-205ENST00000467789 GLP2RO95838 553 aa11.49□□□□□ -0.57
SSR3-205ENST00000467789 HOXB8P17481 243 aaPredicted RBP11.49□□□□□ -0.57
SSR3-205ENST00000467789 PRPHP41219 470 aa11.49□□□□□ -0.57
SSR3-205ENST00000467789 CAPSQ13938 189 aa11.49□□□□□ -0.57
SSR3-205ENST00000467789 KCNC3Q14003 757 aa11.49□□□□□ -0.57
SSR3-205ENST00000467789 ZNF174Q15697 407 aa11.49□□□□□ -0.57
SSR3-205ENST00000467789 UBXN11Q5T124 520 aa11.49□□□□□ -0.57
SSR3-205ENST00000467789 AGMOQ6ZNB7 445 aa11.49□□□□□ -0.57
SSR3-205ENST00000467789 DDX53Q86TM3 631 aaKnown RBP11.49□□□□□ -0.57
SSR3-205ENST00000467789 MRPL43Q8N983 215 aaKnown RBP11.49□□□□□ -0.57
SSR3-205ENST00000467789 LPPQ93052 612 aa11.49□□□□□ -0.57
SSR3-205ENST00000467789 ZDHHC16Q969W1 377 aa11.49□□□□□ -0.57
SSR3-205ENST00000467789 TMEM175Q9BSA9 504 aa11.49□□□□□ -0.57
SSR3-205ENST00000467789 CSRNP2Q9H175 543 aa11.49□□□□□ -0.57
SSR3-205ENST00000467789 CD320Q9NPF0 282 aa11.49□□□□□ -0.57
SSR3-205ENST00000467789 PRMT7Q9NVM4 692 aaPredicted RBP11.49□□□□□ -0.57
SSR3-205ENST00000467789 USO1O60763 962 aaKnown RBP11.48□□□□□ -0.57
SSR3-205ENST00000467789 MED24O75448 989 aa11.48□□□□□ -0.57
SSR3-205ENST00000467789 ALDH2P05091 517 aa11.48□□□□□ -0.57
SSR3-205ENST00000467789 GALTP07902 379 aa11.48□□□□□ -0.57
SSR3-205ENST00000467789 ITGA4P13612 1032 aa11.48□□□□□ -0.57
SSR3-205ENST00000467789 GLRA2P23416 452 aa11.48□□□□□ -0.57
SSR3-205ENST00000467789 PBX3P40426 434 aa11.48□□□□□ -0.57
SSR3-205ENST00000467789 MBTD1Q05BQ5 628 aa11.48□□□□□ -0.57
SSR3-205ENST00000467789 PPP2R5AQ15172 486 aa11.48□□□□□ -0.57
SSR3-205ENST00000467789 FAM187BQ17R55 369 aa11.48□□□□□ -0.57
SSR3-205ENST00000467789 RILPL1Q5EBL4 403 aa11.48□□□□□ -0.57
SSR3-205ENST00000467789 TMEM31Q5JXX7 168 aa11.48□□□□□ -0.57
SSR3-205ENST00000467789 VARS2Q5ST30 1063 aaKnown RBP11.48□□□□□ -0.57
SSR3-205ENST00000467789 PLPP4Q5VZY2 271 aa11.48□□□□□ -0.57
SSR3-205ENST00000467789 SLC27A1Q6PCB7 646 aa11.48□□□□□ -0.57
SSR3-205ENST00000467789 ZBTB8OSQ8IWT0 167 aa11.48□□□□□ -0.57
SSR3-205ENST00000467789 KCTD17Q8N5Z5 321 aa11.48□□□□□ -0.57
SSR3-205ENST00000467789 C4orf32Q8N8J7 132 aa11.48□□□□□ -0.57
SSR3-205ENST00000467789 IGSF22Q8N9C0 903 aa11.48□□□□□ -0.57
SSR3-205ENST00000467789 ASAP3Q8TDY4 903 aa11.48□□□□□ -0.57
SSR3-205ENST00000467789 DDX12PQ92771 950 aa11.48□□□□□ -0.57
SSR3-205ENST00000467789 CASP10Q92851 521 aa11.48□□□□□ -0.57
SSR3-205ENST00000467789 IGSF21Q96ID5 467 aa11.48□□□□□ -0.57
SSR3-205ENST00000467789 FAM193BQ96PV7 902 aaPredicted RBP11.48□□□□□ -0.57
SSR3-205ENST00000467789 TRIM6Q9C030 488 aaPredicted RBP11.48□□□□□ -0.57
SSR3-205ENST00000467789 POLR3FQ9H1D9 316 aaPredicted RBP11.48□□□□□ -0.57
SSR3-205ENST00000467789 C2orf40Q9H1Z8 148 aa11.48□□□□□ -0.57
SSR3-205ENST00000467789 NRDE2Q9H7Z3 1164 aa11.48□□□□□ -0.57
SSR3-205ENST00000467789 LRWD1Q9UFC0 647 aa11.48□□□□□ -0.57
SSR3-205ENST00000467789 INPP5FQ9Y2H2 1132 aa11.48□□□□□ -0.57
SSR3-205ENST00000467789 C5orf42Q9H799 3197 aa11.48□□□□□ -0.57
SSR3-205ENST00000467789 A0A1B0GUA9 196 aa11.47□□□□□ -0.57
SSR3-205ENST00000467789 ARHGEF35A5YM69 484 aa11.47□□□□□ -0.57
SSR3-205ENST00000467789 C2orf71A6NGG8 1288 aa11.47□□□□□ -0.57
SSR3-205ENST00000467789 MEIS3P2A8K0S8 358 aa11.47□□□□□ -0.57
SSR3-205ENST00000467789 PER2O15055 1255 aa11.47□□□□□ -0.57
SSR3-205ENST00000467789 DCXO43602 365 aa11.47□□□□□ -0.57
SSR3-205ENST00000467789 NR1I2O75469 434 aa11.47□□□□□ -0.57
SSR3-205ENST00000467789 CTSAP10619 480 aa11.47□□□□□ -0.57
SSR3-205ENST00000467789 ARF4P18085 180 aaPredicted RBP11.47□□□□□ -0.57
SSR3-205ENST00000467789 CYP11B2P19099 503 aa11.47□□□□□ -0.57
SSR3-205ENST00000467789 CCT6AP40227 531 aaKnown RBP11.47□□□□□ -0.57
SSR3-205ENST00000467789 NAMPTP43490 491 aa11.47□□□□□ -0.57
SSR3-205ENST00000467789 PTGDRQ13258 359 aa11.47□□□□□ -0.57
SSR3-205ENST00000467789 CLUL1Q15846 466 aa11.47□□□□□ -0.57
SSR3-205ENST00000467789 AMHR2Q16671 573 aa11.47□□□□□ -0.57
SSR3-205ENST00000467789 TPRNQ4KMQ1 711 aa11.47□□□□□ -0.57
SSR3-205ENST00000467789 CDCA2Q69YH5 1023 aaPredicted RBP11.47□□□□□ -0.57
SSR3-205ENST00000467789 POTEGQ6S5H5 508 aa11.47□□□□□ -0.57
SSR3-205ENST00000467789 PADI6Q6TGC4 694 aa11.47□□□□□ -0.57
SSR3-205ENST00000467789 VPS52Q8N1B4 723 aa11.47□□□□□ -0.57
SSR3-205ENST00000467789 TMEM87AQ8NBN3 555 aa11.47□□□□□ -0.57
SSR3-205ENST00000467789 SMG8Q8ND04 991 aaKnown RBP11.47□□□□□ -0.57
SSR3-205ENST00000467789 TMX3Q96JJ7 454 aa11.47□□□□□ -0.57
SSR3-205ENST00000467789 ZBP1Q9H171 429 aa11.47□□□□□ -0.57
SSR3-205ENST00000467789 EPHX3Q9H6B9 360 aa11.47□□□□□ -0.57
SSR3-205ENST00000467789 BARX2Q9UMQ3 279 aaPredicted RBP11.47□□□□□ -0.57
SSR3-205ENST00000467789 GIT1Q9Y2X7 761 aa11.47□□□□□ -0.57
SSR3-205ENST00000467789 IPPQ9Y573 584 aa11.47□□□□□ -0.57
SSR3-205ENST00000467789 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms