RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 DCDC2CA8MYV0 355 aa7.51□□□□□ -1.21
SCAF4-204ENST00000467731 PDXKO00764 312 aa7.51□□□□□ -1.21
SCAF4-204ENST00000467731 CLIC2O15247 247 aa7.51□□□□□ -1.21
SCAF4-204ENST00000467731 TLR3O15455 904 aaKnown RBP7.51□□□□□ -1.21
SCAF4-204ENST00000467731 B4GALT5O43286 388 aa7.51□□□□□ -1.21
SCAF4-204ENST00000467731 CRYBB1P53674 252 aaPredicted RBP7.51□□□□□ -1.21
SCAF4-204ENST00000467731 SATB1Q01826 763 aa7.51□□□□□ -1.21
SCAF4-204ENST00000467731 LRRC63Q05C16 580 aa7.51□□□□□ -1.21
SCAF4-204ENST00000467731 AMHR2Q16671 573 aa7.51□□□□□ -1.21
SCAF4-204ENST00000467731 SLC39A4Q6P5W5 647 aa7.51□□□□□ -1.21
SCAF4-204ENST00000467731 ZNF710Q8N1W2 664 aa7.51□□□□□ -1.21
SCAF4-204ENST00000467731 CAGE1Q8TC20 777 aa7.51□□□□□ -1.21
SCAF4-204ENST00000467731 BICD1Q96G01 975 aa7.51□□□□□ -1.21
SCAF4-204ENST00000467731 TARS2Q9BW92 718 aaKnown RBP7.51□□□□□ -1.21
SCAF4-204ENST00000467731 TYW1Q9NV66 732 aaKnown RBP7.51□□□□□ -1.21
SCAF4-204ENST00000467731 PRMT7Q9NVM4 692 aaPredicted RBP7.51□□□□□ -1.21
SCAF4-204ENST00000467731 EXOC7Q9UPT5 735 aa7.51□□□□□ -1.21
SCAF4-204ENST00000467731 TRAF3IP3Q9Y228 551 aa7.51□□□□□ -1.21
SCAF4-204ENST00000467731 UQCRHLA0A096LP55 91 aa7.51□□□□□ -1.21
SCAF4-204ENST00000467731 BICDL2A1A5D9 508 aa7.51□□□□□ -1.21
SCAF4-204ENST00000467731 BECN2A8MW95 431 aa7.51□□□□□ -1.21
SCAF4-204ENST00000467731 ACKR2O00590 384 aa7.51□□□□□ -1.21
SCAF4-204ENST00000467731 ERLIN2O94905 339 aa7.51□□□□□ -1.21
SCAF4-204ENST00000467731 UQCRHP07919 91 aa7.51□□□□□ -1.21
SCAF4-204ENST00000467731 MYL5Q02045 173 aa7.51□□□□□ -1.21
SCAF4-204ENST00000467731 PRPF4BQ13523 1007 aaKnown RBP7.51□□□□□ -1.21
SCAF4-204ENST00000467731 NCAPHQ15003 741 aa7.51□□□□□ -1.21
SCAF4-204ENST00000467731 FAM187BQ17R55 369 aa7.51□□□□□ -1.21
SCAF4-204ENST00000467731 HS2ST1Q7LGA3 356 aa7.51□□□□□ -1.21
SCAF4-204ENST00000467731 ENOX1Q8TC92 643 aaKnown RBP7.51□□□□□ -1.21
SCAF4-204ENST00000467731 ABHD8Q96I13 439 aa7.51□□□□□ -1.21
SCAF4-204ENST00000467731 PRIMPOLQ96LW4 560 aa7.51□□□□□ -1.21
SCAF4-204ENST00000467731 MRPL4Q9BYD3 311 aaKnown RBP7.51□□□□□ -1.21
SCAF4-204ENST00000467731 OSBPL7Q9BZF2 842 aa7.51□□□□□ -1.21
SCAF4-204ENST00000467731 RBSNQ9H1K0 784 aa7.51□□□□□ -1.21
SCAF4-204ENST00000467731 AGPAT3Q9NRZ7 376 aa7.51□□□□□ -1.21
SCAF4-204ENST00000467731 NFE2L3Q9Y4A8 694 aa7.51□□□□□ -1.21
SCAF4-204ENST00000467731 CEP290O15078 2479 aa7.51□□□□□ -1.21
SCAF4-204ENST00000467731 TRIP11Q15643 1979 aa7.51□□□□□ -1.21
SCAF4-204ENST00000467731 UMODL1Q5DID0 1318 aa7.51□□□□□ -1.21
SCAF4-204ENST00000467731 ANKRD63C9JTQ0 380 aa7.5□□□□□ -1.21
SCAF4-204ENST00000467731 CAND2O75155 1236 aa7.5□□□□□ -1.21
SCAF4-204ENST00000467731 SFPQP23246 707 aaKnown RBP eCLIP7.5□□□□□ -1.21
SCAF4-204ENST00000467731 ADSSP30520 456 aa7.5□□□□□ -1.21
SCAF4-204ENST00000467731 LIG4P49917 911 aa7.5□□□□□ -1.21
SCAF4-204ENST00000467731 RBL2Q08999 1139 aa7.5□□□□□ -1.21
SCAF4-204ENST00000467731 HSP90AA4PQ58FG1 418 aa7.5□□□□□ -1.21
SCAF4-204ENST00000467731 TRAF7Q6Q0C0 670 aa7.5□□□□□ -1.21
SCAF4-204ENST00000467731 PPP4R3CPQ6ZMV5 832 aa7.5□□□□□ -1.21
SCAF4-204ENST00000467731 CATSPER4Q7RTX7 472 aa7.5□□□□□ -1.21
SCAF4-204ENST00000467731 FAM228AQ86W67 206 aa7.5□□□□□ -1.21
SCAF4-204ENST00000467731 CDR2LQ86X02 465 aaPredicted RBP7.5□□□□□ -1.21
SCAF4-204ENST00000467731 CSGALNACT2Q8N6G5 542 aa7.5□□□□□ -1.21
SCAF4-204ENST00000467731 CPB2Q96IY4 423 aa7.5□□□□□ -1.21
SCAF4-204ENST00000467731 ACO2Q99798 780 aaKnown RBP7.5□□□□□ -1.21
SCAF4-204ENST00000467731 TSG101Q99816 390 aa7.5□□□□□ -1.21
SCAF4-204ENST00000467731 DUSP9Q99956 384 aaKnown RBP7.5□□□□□ -1.21
SCAF4-204ENST00000467731 CBWD1Q9BRT8 395 aa7.5□□□□□ -1.21
SCAF4-204ENST00000467731 ANKFY1Q9P2R3 1169 aa7.5□□□□□ -1.21
SCAF4-204ENST00000467731 NOC2LQ9Y3T9 749 aaKnown RBP7.5□□□□□ -1.21
SCAF4-204ENST00000467731 CITO14578 2027 aa7.5□□□□□ -1.21
SCAF4-204ENST00000467731 CNTNAP2Q9UHC6 1331 aa7.5□□□□□ -1.21
SCAF4-204ENST00000467731 PITPNM1O00562 1244 aa7.5□□□□□ -1.21
SCAF4-204ENST00000467731 IKBKBO14920 756 aa7.5□□□□□ -1.21
SCAF4-204ENST00000467731 CALUO43852 315 aaPredicted RBP7.5□□□□□ -1.21
SCAF4-204ENST00000467731 TSPAN1O60635 241 aa7.5□□□□□ -1.21
SCAF4-204ENST00000467731 RPS6KA5O75582 802 aa7.5□□□□□ -1.21
SCAF4-204ENST00000467731 PIGRP01833 764 aa7.5□□□□□ -1.21
SCAF4-204ENST00000467731 GHRP10912 638 aa7.5□□□□□ -1.21
SCAF4-204ENST00000467731 ARF4P18085 180 aaPredicted RBP7.5□□□□□ -1.21
SCAF4-204ENST00000467731 NR2F2P24468 414 aa7.5□□□□□ -1.21
SCAF4-204ENST00000467731 BFSP2Q13515 415 aa7.5□□□□□ -1.21
SCAF4-204ENST00000467731 TPD52L1Q16890 204 aaPredicted RBP7.5□□□□□ -1.21
SCAF4-204ENST00000467731 EDRF1Q3B7T1 1238 aa7.5□□□□□ -1.21
SCAF4-204ENST00000467731 FAM26DQ5JW98 314 aa7.5□□□□□ -1.21
SCAF4-204ENST00000467731 FBXO47Q5MNV8 452 aa7.5□□□□□ -1.21
SCAF4-204ENST00000467731 CCDC155Q8N6L0 562 aa7.5□□□□□ -1.21
SCAF4-204ENST00000467731 ZBTB45Q96K62 511 aaPredicted RBP7.5□□□□□ -1.21
SCAF4-204ENST00000467731 HIPK3Q9H422 1215 aa7.5□□□□□ -1.21
SCAF4-204ENST00000467731 SAMSN1Q9NSI8 373 aaKnown RBP7.5□□□□□ -1.21
SCAF4-204ENST00000467731 CCDC66A2RUB6 948 aa7.5□□□□□ -1.21
SCAF4-204ENST00000467731 NR3C1P04150 777 aa7.5□□□□□ -1.21
SCAF4-204ENST00000467731 CLTBP09497 229 aa7.5□□□□□ -1.21
SCAF4-204ENST00000467731 SELPP16109 830 aa7.5□□□□□ -1.21
SCAF4-204ENST00000467731 HOXA11P31270 313 aaPredicted RBP7.5□□□□□ -1.21
SCAF4-204ENST00000467731 FKBP3Q00688 224 aaKnown RBP7.5□□□□□ -1.21
SCAF4-204ENST00000467731 MBTPS1Q14703 1052 aa7.5□□□□□ -1.21
SCAF4-204ENST00000467731 PCBP1Q15365 356 aaKnown RBP eCLIP7.5□□□□□ -1.21
SCAF4-204ENST00000467731 ATF7IP2Q5U623 682 aa7.5□□□□□ -1.21
SCAF4-204ENST00000467731 SPATA1Q5VX52 437 aa7.5□□□□□ -1.21
SCAF4-204ENST00000467731 ARMCX5Q6P1M9 558 aa7.5□□□□□ -1.21
SCAF4-204ENST00000467731 FOXR2Q6PJQ5 311 aa7.5□□□□□ -1.21
SCAF4-204ENST00000467731 ZPBP2Q6X784 338 aa7.5□□□□□ -1.21
SCAF4-204ENST00000467731 LRRC55Q6ZSA7 311 aa7.5□□□□□ -1.21
SCAF4-204ENST00000467731 LRRC8DQ7L1W4 858 aa7.5□□□□□ -1.21
SCAF4-204ENST00000467731 ZSWIM2Q8NEG5 633 aa7.5□□□□□ -1.21
SCAF4-204ENST00000467731 GOLGA5Q8TBA6 731 aa7.5□□□□□ -1.21
SCAF4-204ENST00000467731 POMGNT1Q8WZA1 660 aa7.5□□□□□ -1.21
SCAF4-204ENST00000467731 NOC4LQ9BVI4 516 aaKnown RBP7.5□□□□□ -1.21
SCAF4-204ENST00000467731 SRRTQ9BXP5 876 aaKnown RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms