RNA–Protein interactions for RNA: ENST00000467717.5

VARS2-204, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 863 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-204ENST00000467717 HOXD13P35453 343 aa18.72■□□□□ 0.59
VARS2-204ENST00000467717 LIG4P49917 911 aa18.72■□□□□ 0.59
VARS2-204ENST00000467717 EPHB4P54760 987 aa18.72■□□□□ 0.59
VARS2-204ENST00000467717 DSC3Q14574 896 aa18.72■□□□□ 0.59
VARS2-204ENST00000467717 TCTN1Q2MV58 587 aa18.72■□□□□ 0.59
VARS2-204ENST00000467717 COBLL1Q53SF7 1204 aa18.72■□□□□ 0.59
VARS2-204ENST00000467717 SMYD4Q8IYR2 804 aaPredicted RBP18.72■□□□□ 0.59
VARS2-204ENST00000467717 GUF1Q8N442 669 aaKnown RBP18.72■□□□□ 0.59
VARS2-204ENST00000467717 ADAM2Q99965 735 aa18.72■□□□□ 0.59
VARS2-204ENST00000467717 TSPYL2Q9H2G4 693 aaPredicted RBP18.72■□□□□ 0.59
VARS2-204ENST00000467717 ABHD14A-ACY1A0A1B0GW23 586 aa18.71■□□□□ 0.59
VARS2-204ENST00000467717 ENPP3O14638 875 aa18.71■□□□□ 0.59
VARS2-204ENST00000467717 N4BP3O15049 544 aa18.71■□□□□ 0.59
VARS2-204ENST00000467717 BAIAP3O94812 1187 aa18.71■□□□□ 0.59
VARS2-204ENST00000467717 LETM1O95202 739 aaPredicted RBP18.71■□□□□ 0.59
VARS2-204ENST00000467717 PPP1R2P41236 205 aa18.71■□□□□ 0.59
VARS2-204ENST00000467717 STIM1Q13586 685 aa18.71■□□□□ 0.59
VARS2-204ENST00000467717 KNOP1Q1ED39 458 aaKnown RBP18.71■□□□□ 0.59
VARS2-204ENST00000467717 TWF2Q6IBS0 349 aaKnown RBP18.71■□□□□ 0.59
VARS2-204ENST00000467717 ZNF365Q70YC5 407 aa18.71■□□□□ 0.59
VARS2-204ENST00000467717 NELFCDQ8IXH7 590 aa18.71■□□□□ 0.59
VARS2-204ENST00000467717 TCHPQ9BT92 498 aa18.71■□□□□ 0.59
VARS2-204ENST00000467717 TRAIPQ9BWF2 469 aa18.71■□□□□ 0.59
VARS2-204ENST00000467717 GBP3Q9H0R5 595 aa18.71■□□□□ 0.59
VARS2-204ENST00000467717 PDZD7Q9H5P4 517 aa18.71■□□□□ 0.59
VARS2-204ENST00000467717 PTPRHQ9HD43 1115 aa18.71■□□□□ 0.59
VARS2-204ENST00000467717 RGS18Q9NS28 235 aa18.71■□□□□ 0.59
VARS2-204ENST00000467717 C1orf112Q9NSG2 853 aa18.71■□□□□ 0.59
VARS2-204ENST00000467717 MAPK8IP1Q9UQF2 711 aa18.71■□□□□ 0.59
VARS2-204ENST00000467717 MGEA5O60502 916 aa18.7■□□□□ 0.58
VARS2-204ENST00000467717 PROZP22891 400 aa18.7■□□□□ 0.58
VARS2-204ENST00000467717 PRCPP42785 496 aa18.7■□□□□ 0.58
VARS2-204ENST00000467717 SNRPFP62306 86 aaKnown RBP18.7■□□□□ 0.58
VARS2-204ENST00000467717 TMEM240Q5SV17 173 aa18.7■□□□□ 0.58
VARS2-204ENST00000467717 EEF1DP3Q658K8 133 aa18.7■□□□□ 0.58
VARS2-204ENST00000467717 SLFN12LQ6IEE8 588 aa18.7■□□□□ 0.58
VARS2-204ENST00000467717 SLC27A1Q6PCB7 646 aa18.7■□□□□ 0.58
VARS2-204ENST00000467717 SASS6Q6UVJ0 657 aa18.7■□□□□ 0.58
VARS2-204ENST00000467717 HS2ST1Q7LGA3 356 aa18.7■□□□□ 0.58
VARS2-204ENST00000467717 OTOP2Q7RTS6 562 aa18.7■□□□□ 0.58
VARS2-204ENST00000467717 APBB1IPQ7Z5R6 666 aaPredicted RBP18.7■□□□□ 0.58
VARS2-204ENST00000467717 RTN4RL1Q86UN2 441 aaPredicted RBP18.7■□□□□ 0.58
VARS2-204ENST00000467717 CDR2LQ86X02 465 aaPredicted RBP18.7■□□□□ 0.58
VARS2-204ENST00000467717 ADSSL1Q8N142 457 aa18.7■□□□□ 0.58
VARS2-204ENST00000467717 LINC01599Q8WXQ3 324 aa18.7■□□□□ 0.58
VARS2-204ENST00000467717 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.7■□□□□ 0.582e-8■■■■□ 24.4
VARS2-204ENST00000467717 ADPGKQ9BRR6 497 aa18.7■□□□□ 0.58
VARS2-204ENST00000467717 PRO3102Q9H379 93 aa18.7■□□□□ 0.58
VARS2-204ENST00000467717 CLDN3O15551 220 aa18.69■□□□□ 0.58
VARS2-204ENST00000467717 RAB27AP51159 221 aa18.69■□□□□ 0.58
VARS2-204ENST00000467717 NLRP12P59046 1061 aa18.69■□□□□ 0.58
VARS2-204ENST00000467717 DCAF4L1Q3SXM0 396 aa18.69■□□□□ 0.58
VARS2-204ENST00000467717 ZNF568Q3ZCX4 644 aa18.69■□□□□ 0.58
VARS2-204ENST00000467717 UBXN11Q5T124 520 aa18.69■□□□□ 0.58
VARS2-204ENST00000467717 SLC39A4Q6P5W5 647 aa18.69■□□□□ 0.58
VARS2-204ENST00000467717 MPZL3Q6UWV2 235 aa18.69■□□□□ 0.58
VARS2-204ENST00000467717 SLC24A5Q71RS6 500 aa18.69■□□□□ 0.58
VARS2-204ENST00000467717 MLKLQ8NB16 471 aa18.69■□□□□ 0.58
VARS2-204ENST00000467717 GOLGA5Q8TBA6 731 aa18.69■□□□□ 0.58
VARS2-204ENST00000467717 GDF15Q99988 308 aa18.69■□□□□ 0.58
VARS2-204ENST00000467717 TRIM6Q9C030 488 aaPredicted RBP18.69■□□□□ 0.58
VARS2-204ENST00000467717 IKZF4Q9H2S9 585 aa18.69■□□□□ 0.58
VARS2-204ENST00000467717 ANKFY1Q9P2R3 1169 aa18.69■□□□□ 0.58
VARS2-204ENST00000467717 STYXL1Q9Y6J8 313 aa18.69■□□□□ 0.58
VARS2-204ENST00000467717 ZMYM2Q9UBW7 1377 aa18.68■□□□□ 0.58
VARS2-204ENST00000467717 A0A0U1RQF3 1178 aa18.68■□□□□ 0.58
VARS2-204ENST00000467717 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.68■□□□□ 0.58
VARS2-204ENST00000467717 PPP1R3GB7ZBB8 358 aa18.68■□□□□ 0.58
VARS2-204ENST00000467717 C9IYK1 514 aa18.68■□□□□ 0.58
VARS2-204ENST00000467717 ANKRD63C9JTQ0 380 aa18.68■□□□□ 0.58
VARS2-204ENST00000467717 PDXKO00764 312 aa18.68■□□□□ 0.58
VARS2-204ENST00000467717 ABLIM1O14639 778 aa18.68■□□□□ 0.58
VARS2-204ENST00000467717 PSMA7O14818 248 aa18.68■□□□□ 0.58
VARS2-204ENST00000467717 TGFB1I1O43294 461 aa18.68■□□□□ 0.58
VARS2-204ENST00000467717 MCF2P10911 925 aa18.68■□□□□ 0.58
VARS2-204ENST00000467717 SKIP12755 728 aa18.68■□□□□ 0.58
VARS2-204ENST00000467717 FAM189BP81408 668 aa18.68■□□□□ 0.58
VARS2-204ENST00000467717 MCL1Q07820 350 aa18.68■□□□□ 0.58
VARS2-204ENST00000467717 HERVK_113Q902F9 699 aa18.68■□□□□ 0.58
VARS2-204ENST00000467717 DHTKD1Q96HY7 919 aaPredicted RBP18.68■□□□□ 0.58
VARS2-204ENST00000467717 ZBTB45Q96K62 511 aaPredicted RBP18.68■□□□□ 0.58
VARS2-204ENST00000467717 EIF2AQ9BY44 585 aaKnown RBP18.68■□□□□ 0.58
VARS2-204ENST00000467717 CDT1Q9H211 546 aa18.68■□□□□ 0.58
VARS2-204ENST00000467717 MTIF3Q9H2K0 278 aaKnown RBP18.68■□□□□ 0.58
VARS2-204ENST00000467717 KCTD10Q9H3F6 313 aa18.68■□□□□ 0.58
VARS2-204ENST00000467717 AGPAT3Q9NRZ7 376 aa18.68■□□□□ 0.58
VARS2-204ENST00000467717 FAM105AQ9NUU6 356 aa18.68■□□□□ 0.58
VARS2-204ENST00000467717 TYW1Q9NV66 732 aaKnown RBP18.68■□□□□ 0.58
VARS2-204ENST00000467717 CGNQ9P2M7 1197 aaKnown RBP18.68■□□□□ 0.58
VARS2-204ENST00000467717 PCDHB2Q9Y5E7 798 aa18.68■□□□□ 0.58
VARS2-204ENST00000467717 TANC1Q9C0D5 1861 aa18.67■□□□□ 0.58
VARS2-204ENST00000467717 TISP43B9A030 160 aa18.67■□□□□ 0.58
VARS2-204ENST00000467717 ZNF623O75123 536 aa18.67■□□□□ 0.58
VARS2-204ENST00000467717 NPTXRO95502 500 aa18.67■□□□□ 0.58
VARS2-204ENST00000467717 CD44P16070 742 aaKnown RBP18.67■□□□□ 0.58
VARS2-204ENST00000467717 ADSSP30520 456 aa18.67■□□□□ 0.58
VARS2-204ENST00000467717 MATR3P43243 847 aaKnown RBP eCLIP18.67■□□□□ 0.58
VARS2-204ENST00000467717 NOLC1Q14978 699 aaKnown RBP eCLIP18.67■□□□□ 0.58
VARS2-204ENST00000467717 ZBTB33Q86T24 672 aa18.67■□□□□ 0.58
VARS2-204ENST00000467717 POMGNT1Q8WZA1 660 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms