RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.56□□□□□ -0.56
HDAC3-203ENST00000467533 KANSL3Q9P2N6 904 aa11.56□□□□□ -0.56
HDAC3-203ENST00000467533 GABBR1Q9UBS5 961 aa11.56□□□□□ -0.56
HDAC3-203ENST00000467533 TICRRQ7Z2Z1 1910 aa11.56□□□□□ -0.56
HDAC3-203ENST00000467533 CNTNAP2Q9UHC6 1331 aa11.56□□□□□ -0.56
HDAC3-203ENST00000467533 A0A087WZ62 844 aa11.55□□□□□ -0.56
HDAC3-203ENST00000467533 hCG_1642624A0A1W2PR95 340 aa11.55□□□□□ -0.56
HDAC3-203ENST00000467533 MEIS1O00470 390 aa11.55□□□□□ -0.56
HDAC3-203ENST00000467533 HRO43593 1189 aa11.55□□□□□ -0.56
HDAC3-203ENST00000467533 ZNF623O75123 536 aa11.55□□□□□ -0.56
HDAC3-203ENST00000467533 ZIC2O95409 532 aaPredicted RBP11.55□□□□□ -0.56
HDAC3-203ENST00000467533 C1RP00736 705 aa11.55□□□□□ -0.56
HDAC3-203ENST00000467533 PSAPP07602 524 aa11.55□□□□□ -0.56
HDAC3-203ENST00000467533 RPL17P18621 184 aaKnown RBP11.55□□□□□ -0.56
HDAC3-203ENST00000467533 SPINK2P20155 84 aa11.55□□□□□ -0.56
HDAC3-203ENST00000467533 CNR2P34972 360 aa11.55□□□□□ -0.56
HDAC3-203ENST00000467533 RBM25P49756 843 aaKnown RBP11.55□□□□□ -0.56
HDAC3-203ENST00000467533 AFF1P51825 1210 aaKnown RBP11.55□□□□□ -0.56
HDAC3-203ENST00000467533 SATB1Q01826 763 aa11.55□□□□□ -0.56
HDAC3-203ENST00000467533 CATSPER4Q7RTX7 472 aa11.55□□□□□ -0.56
HDAC3-203ENST00000467533 HEATR3Q7Z4Q2 680 aa11.55□□□□□ -0.56
HDAC3-203ENST00000467533 PLA2G4DQ86XP0 818 aa11.55□□□□□ -0.56
HDAC3-203ENST00000467533 RNF168Q8IYW5 571 aaPredicted RBP11.55□□□□□ -0.56
HDAC3-203ENST00000467533 ZNF654Q8IZM8 581 aa11.55□□□□□ -0.56
HDAC3-203ENST00000467533 CMTR1Q8N1G2 835 aaKnown RBP11.55□□□□□ -0.56
HDAC3-203ENST00000467533 ING5Q8WYH8 240 aa11.55□□□□□ -0.56
HDAC3-203ENST00000467533 B3GALT6Q96L58 329 aa11.55□□□□□ -0.56
HDAC3-203ENST00000467533 LZTS2Q9BRK4 669 aa11.55□□□□□ -0.56
HDAC3-203ENST00000467533 FDXACB1Q9BRP7 624 aaPredicted RBP11.55□□□□□ -0.56
HDAC3-203ENST00000467533 RXFP3Q9NSD7 469 aa11.55□□□□□ -0.56
HDAC3-203ENST00000467533 SAMM50Q9Y512 469 aa11.55□□□□□ -0.56
HDAC3-203ENST00000467533 PCDHB2Q9Y5E7 798 aa11.55□□□□□ -0.56
HDAC3-203ENST00000467533 NBEAQ8NFP9 2946 aa11.55□□□□□ -0.56
HDAC3-203ENST00000467533 IPO5O00410 1097 aaKnown RBP11.54□□□□□ -0.56
HDAC3-203ENST00000467533 MAN2B1O00754 1011 aa11.54□□□□□ -0.56
HDAC3-203ENST00000467533 AXIN1O15169 862 aa11.54□□□□□ -0.56
HDAC3-203ENST00000467533 CCL16O15467 120 aa11.54□□□□□ -0.56
HDAC3-203ENST00000467533 XYLBO75191 536 aa11.54□□□□□ -0.56
HDAC3-203ENST00000467533 DDAH1O94760 285 aa11.54□□□□□ -0.56
HDAC3-203ENST00000467533 OATP04181 439 aa11.54□□□□□ -0.56
HDAC3-203ENST00000467533 HNRNPA1P09651 372 aaKnown RBP eCLIP11.54□□□□□ -0.56
HDAC3-203ENST00000467533 SMARCA1P28370 1054 aa11.54□□□□□ -0.56
HDAC3-203ENST00000467533 CXCL12P48061 93 aa11.54□□□□□ -0.56
HDAC3-203ENST00000467533 GNAQP50148 359 aa11.54□□□□□ -0.56
HDAC3-203ENST00000467533 NOVA1P51513 510 aaKnown RBP11.54□□□□□ -0.56
HDAC3-203ENST00000467533 CREMQ03060 361 aa11.54□□□□□ -0.56
HDAC3-203ENST00000467533 ZNF252P-AS1Q0IIN9 211 aa11.54□□□□□ -0.56
HDAC3-203ENST00000467533 PPM1LQ5SGD2 360 aa11.54□□□□□ -0.56
HDAC3-203ENST00000467533 HEATR6Q6AI08 1181 aaKnown RBP11.54□□□□□ -0.56
HDAC3-203ENST00000467533 ZNF746Q6NUN9 644 aaPredicted RBP11.54□□□□□ -0.56
HDAC3-203ENST00000467533 LILRA6Q6PI73 481 aa11.54□□□□□ -0.56
HDAC3-203ENST00000467533 LONP2Q86WA8 852 aa11.54□□□□□ -0.56
HDAC3-203ENST00000467533 NPAS3Q8IXF0 933 aa11.54□□□□□ -0.56
HDAC3-203ENST00000467533 SMAP1Q8IYB5 467 aaPredicted RBP11.54□□□□□ -0.56
HDAC3-203ENST00000467533 SRBD1Q8N5C6 995 aaKnown RBP11.54□□□□□ -0.56
HDAC3-203ENST00000467533 DNASE1L2Q92874 299 aa11.54□□□□□ -0.56
HDAC3-203ENST00000467533 MAP3K14Q99558 947 aa11.54□□□□□ -0.56
HDAC3-203ENST00000467533 ZNF577Q9BSK1 485 aa11.54□□□□□ -0.56
HDAC3-203ENST00000467533 LSM14BQ9BX40 385 aaKnown RBP11.54□□□□□ -0.56
HDAC3-203ENST00000467533 TMEM121BQ9BXQ6 578 aaPredicted RBP11.54□□□□□ -0.56
HDAC3-203ENST00000467533 INO80BQ9C086 356 aaPredicted RBP11.54□□□□□ -0.56
HDAC3-203ENST00000467533 ARRDC1-AS1Q9H2J1 176 aa11.54□□□□□ -0.56
HDAC3-203ENST00000467533 LMAN1LQ9HAT1 526 aa11.54□□□□□ -0.56
HDAC3-203ENST00000467533 FNIP2Q9P278 1114 aa11.54□□□□□ -0.56
HDAC3-203ENST00000467533 FBXW11Q9UKB1 542 aa11.54□□□□□ -0.56
HDAC3-203ENST00000467533 PCDHB15Q9Y5E8 787 aa11.54□□□□□ -0.56
HDAC3-203ENST00000467533 PDCD11Q14690 1871 aaKnown RBP11.54□□□□□ -0.56
HDAC3-203ENST00000467533 SHISA7A6NL88 538 aa11.53□□□□□ -0.56
HDAC3-203ENST00000467533 F8W810 466 aa11.53□□□□□ -0.56
HDAC3-203ENST00000467533 TAF4O00268 1085 aa11.53□□□□□ -0.56
HDAC3-203ENST00000467533 DHX15O43143 795 aaKnown RBP11.53□□□□□ -0.56
HDAC3-203ENST00000467533 NR1I2O75469 434 aa11.53□□□□□ -0.56
HDAC3-203ENST00000467533 ECI2O75521 394 aa11.53□□□□□ -0.56
HDAC3-203ENST00000467533 C8AP07357 584 aa11.53□□□□□ -0.56
HDAC3-203ENST00000467533 PRKCEQ02156 737 aa11.53□□□□□ -0.56
HDAC3-203ENST00000467533 DRP2Q13474 957 aa11.53□□□□□ -0.56
HDAC3-203ENST00000467533 MAMSTRQ6ZN01 415 aa11.53□□□□□ -0.56
HDAC3-203ENST00000467533 NIPA1Q7RTP0 329 aa11.53□□□□□ -0.56
HDAC3-203ENST00000467533 COLGALT2Q8IYK4 626 aa11.53□□□□□ -0.56
HDAC3-203ENST00000467533 MBOAT7Q96N66 472 aa11.53□□□□□ -0.56
HDAC3-203ENST00000467533 CHST7Q9NS84 486 aa11.53□□□□□ -0.56
HDAC3-203ENST00000467533 NRBP2Q9NSY0 501 aa11.53□□□□□ -0.56
HDAC3-203ENST00000467533 RCAN3Q9UKA8 241 aa11.53□□□□□ -0.56
HDAC3-203ENST00000467533 PCDHA10Q9Y5I2 948 aa11.53□□□□□ -0.56
HDAC3-203ENST00000467533 ITPR1Q14643 2758 aa11.52□□□□□ -0.56
HDAC3-203ENST00000467533 FAM86B1E9PN63 330 aa11.52□□□□□ -0.57
HDAC3-203ENST00000467533 HIP1O00291 1037 aa11.52□□□□□ -0.57
HDAC3-203ENST00000467533 EFEMP2O95967 443 aa11.52□□□□□ -0.57
HDAC3-203ENST00000467533 FOSP01100 380 aaPredicted RBP11.52□□□□□ -0.57
HDAC3-203ENST00000467533 FAM86B2P0C5J1 330 aa11.52□□□□□ -0.57
HDAC3-203ENST00000467533 ZNF806P0C7X5 589 aa11.52□□□□□ -0.57
HDAC3-203ENST00000467533 SREBF1P36956 1147 aa11.52□□□□□ -0.57
HDAC3-203ENST00000467533 NAPAP54920 295 aa11.52□□□□□ -0.57
HDAC3-203ENST00000467533 CDC42EP1Q00587 391 aa11.52□□□□□ -0.57
HDAC3-203ENST00000467533 USP41Q3LFD5 358 aa11.52□□□□□ -0.57
HDAC3-203ENST00000467533 PABPC1LQ4VXU2 614 aaKnown RBP11.52□□□□□ -0.57
HDAC3-203ENST00000467533 RNF43Q68DV7 783 aa11.52□□□□□ -0.57
HDAC3-203ENST00000467533 FUT10Q6P4F1 479 aa11.52□□□□□ -0.57
HDAC3-203ENST00000467533 ZNF410Q86VK4 478 aa11.52□□□□□ -0.57
HDAC3-203ENST00000467533 RHPN2Q8IUC4 686 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms