RNA–Protein interactions for RNA: ENST00000467275.1

ATG3-204, Transcript of autophagy related 3, humanhuman

TSL 3

Gene ATG3, Length 559 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-204ENST00000467275 DALRD3Q5D0E6 543 aaKnown RBP6.73□□□□□ -1.33
ATG3-204ENST00000467275 KCNV1Q6PIU1 500 aa6.73□□□□□ -1.33
ATG3-204ENST00000467275 MSL3Q8N5Y2 521 aaKnown RBP6.73□□□□□ -1.33
ATG3-204ENST00000467275 OR52N2Q8NGI0 321 aa6.73□□□□□ -1.33
ATG3-204ENST00000467275 WNT8AQ9H1J5 351 aa6.73□□□□□ -1.33
ATG3-204ENST00000467275 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.73□□□□□ -1.33
ATG3-204ENST00000467275 PPP2R3BQ9Y5P8 575 aa6.73□□□□□ -1.33
ATG3-204ENST00000467275 A0A1W2PR48 441 aa6.72□□□□□ -1.33
ATG3-204ENST00000467275 HSP90B1P14625 803 aaKnown RBP6.72□□□□□ -1.33
ATG3-204ENST00000467275 NR4A1P22736 598 aa6.72□□□□□ -1.33
ATG3-204ENST00000467275 MANFP55145 182 aaKnown RBP6.72□□□□□ -1.33
ATG3-204ENST00000467275 NANOS3P60323 173 aaKnown RBP6.72□□□□□ -1.33
ATG3-204ENST00000467275 VPS72Q15906 364 aa6.72□□□□□ -1.33
ATG3-204ENST00000467275 TIGD2Q4W5G0 525 aa6.72□□□□□ -1.33
ATG3-204ENST00000467275 BROXQ5VW32 411 aa6.72□□□□□ -1.33
ATG3-204ENST00000467275 KRTAP5-3Q6L8H2 238 aa6.72□□□□□ -1.33
ATG3-204ENST00000467275 CCDC62Q6P9F0 684 aa6.72□□□□□ -1.33
ATG3-204ENST00000467275 PCSK4Q6UW60 755 aa6.72□□□□□ -1.33
ATG3-204ENST00000467275 RHOUQ7L0Q8 258 aa6.72□□□□□ -1.33
ATG3-204ENST00000467275 LEO1Q8WVC0 666 aaPredicted RBP6.72□□□□□ -1.33
ATG3-204ENST00000467275 RSAD2Q8WXG1 361 aa6.72□□□□□ -1.33
ATG3-204ENST00000467275 MLST8Q9BVC4 326 aa6.72□□□□□ -1.33
ATG3-204ENST00000467275 CPEB1Q9BZB8 566 aaKnown RBP6.72□□□□□ -1.33
ATG3-204ENST00000467275 PRSS50Q9UI38 385 aa6.72□□□□□ -1.33
ATG3-204ENST00000467275 NOC2LQ9Y3T9 749 aaKnown RBP6.72□□□□□ -1.33
ATG3-204ENST00000467275 PRAMEF4O60810 478 aa6.71□□□□□ -1.34
ATG3-204ENST00000467275 CLEC2LP0C7M8 214 aa6.71□□□□□ -1.34
ATG3-204ENST00000467275 UBE3CQ15386 1083 aa6.71□□□□□ -1.34
ATG3-204ENST00000467275 MBNL2Q5VZF2 373 aaKnown RBP6.71□□□□□ -1.34
ATG3-204ENST00000467275 LRRC55Q6ZSA7 311 aa6.71□□□□□ -1.34
ATG3-204ENST00000467275 DOK3Q7L591 496 aa6.71□□□□□ -1.34
ATG3-204ENST00000467275 XYLT1Q86Y38 959 aa6.71□□□□□ -1.34
ATG3-204ENST00000467275 OR14C36Q8NHC7 312 aa6.71□□□□□ -1.34
ATG3-204ENST00000467275 SLC5A5Q92911 643 aa6.71□□□□□ -1.34
ATG3-204ENST00000467275 NDC1Q9BTX1 674 aa6.71□□□□□ -1.34
ATG3-204ENST00000467275 LSM14BQ9BX40 385 aaKnown RBP6.71□□□□□ -1.34
ATG3-204ENST00000467275 KCNH6Q9H252 994 aa6.71□□□□□ -1.34
ATG3-204ENST00000467275 EMC7Q9NPA0 242 aa6.71□□□□□ -1.34
ATG3-204ENST00000467275 EVLQ9UI08 416 aaPredicted RBP6.71□□□□□ -1.34
ATG3-204ENST00000467275 TMPRSS11EQ9UL52 423 aa6.71□□□□□ -1.34
ATG3-204ENST00000467275 PRR5-ARHGAP8B1AHC4 643 aa6.7□□□□□ -1.34
ATG3-204ENST00000467275 GCP02774 474 aa6.7□□□□□ -1.34
ATG3-204ENST00000467275 LTA4HP09960 611 aaKnown RBP6.7□□□□□ -1.34
ATG3-204ENST00000467275 LAG3P18627 525 aa6.7□□□□□ -1.34
ATG3-204ENST00000467275 APOBEC3AP31941 199 aaPredicted RBP6.7□□□□□ -1.34
ATG3-204ENST00000467275 APBA1Q02410 837 aa6.7□□□□□ -1.34
ATG3-204ENST00000467275 IQSEC1Q6DN90 963 aa6.7□□□□□ -1.34
ATG3-204ENST00000467275 JAZF1Q86VZ6 243 aa6.7□□□□□ -1.34
ATG3-204ENST00000467275 VRK3Q8IV63 474 aa6.7□□□□□ -1.34
ATG3-204ENST00000467275 CRAMP1Q96RY5 1269 aa6.7□□□□□ -1.34
ATG3-204ENST00000467275 CDC5LQ99459 802 aaKnown RBP6.7□□□□□ -1.34
ATG3-204ENST00000467275 SPON1Q9HCB6 807 aa6.7□□□□□ -1.34
ATG3-204ENST00000467275 CLCA2Q9UQC9 943 aa6.7□□□□□ -1.34
ATG3-204ENST00000467275 RHOBTB3O94955 611 aa6.69□□□□□ -1.34
ATG3-204ENST00000467275 ATP13A4Q4VNC1 1196 aa6.69□□□□□ -1.34
ATG3-204ENST00000467275 PLEKHG4Q58EX7 1191 aa6.69□□□□□ -1.34
ATG3-204ENST00000467275 RASSF3Q86WH2 238 aa6.69□□□□□ -1.34
ATG3-204ENST00000467275 SLC46A2Q9BY10 475 aa6.69□□□□□ -1.34
ATG3-204ENST00000467275 ZNF768Q9H5H4 540 aaKnown RBP6.69□□□□□ -1.34
ATG3-204ENST00000467275 TRPM5Q9NZQ8 1165 aa6.69□□□□□ -1.34
ATG3-204ENST00000467275 GSG1L2A8MUP6 293 aa6.68□□□□□ -1.34
ATG3-204ENST00000467275 AHRRA9YTQ3 701 aa6.68□□□□□ -1.34
ATG3-204ENST00000467275 MYCLP1P12525 358 aaPredicted RBP6.68□□□□□ -1.34
ATG3-204ENST00000467275 BMP5P22003 454 aa6.68□□□□□ -1.34
ATG3-204ENST00000467275 PTTG1IPP53801 180 aa6.68□□□□□ -1.34
ATG3-204ENST00000467275 TRIM25Q14258 630 aaKnown RBP6.68□□□□□ -1.34
ATG3-204ENST00000467275 KIAA0907Q7Z7F0 614 aaPredicted RBP6.68□□□□□ -1.34
ATG3-204ENST00000467275 LYSMD2Q8IV50 215 aa6.68□□□□□ -1.34
ATG3-204ENST00000467275 USP7Q93009 1102 aa6.68□□□□□ -1.34
ATG3-204ENST00000467275 DCLRE1CQ96SD1 692 aaKnown RBP6.68□□□□□ -1.34
ATG3-204ENST00000467275 PDE8AO60658 829 aa6.67□□□□□ -1.34
ATG3-204ENST00000467275 LPLP06858 475 aa6.67□□□□□ -1.34
ATG3-204ENST00000467275 LGALS4P56470 323 aa6.67□□□□□ -1.34
ATG3-204ENST00000467275 MEF2AQ02078 507 aaPredicted RBP6.67□□□□□ -1.34
ATG3-204ENST00000467275 CT83Q5H943 113 aa6.67□□□□□ -1.34
ATG3-204ENST00000467275 GDF7Q7Z4P5 450 aa6.67□□□□□ -1.34
ATG3-204ENST00000467275 ZNF575Q86XF7 245 aa6.67□□□□□ -1.34
ATG3-204ENST00000467275 SLC41A1Q8IVJ1 513 aa6.67□□□□□ -1.34
ATG3-204ENST00000467275 KCTD10Q9H3F6 313 aa6.67□□□□□ -1.34
ATG3-204ENST00000467275 PACSIN3Q9UKS6 424 aa6.67□□□□□ -1.34
ATG3-204ENST00000467275 HS3ST4Q9Y661 456 aa6.67□□□□□ -1.34
ATG3-204ENST00000467275 CDY2AQ9Y6F7 541 aa6.67□□□□□ -1.34
ATG3-204ENST00000467275 LEFTY2O00292 366 aa6.66□□□□□ -1.34
ATG3-204ENST00000467275 B3GALT2O43825 422 aa6.66□□□□□ -1.34
ATG3-204ENST00000467275 COL10A1Q03692 680 aa6.66□□□□□ -1.34
ATG3-204ENST00000467275 C19orf54Q5BKX5 351 aa6.66□□□□□ -1.34
ATG3-204ENST00000467275 PITRM1Q5JRX3 1037 aa6.66□□□□□ -1.34
ATG3-204ENST00000467275 ABHD15Q6UXT9 468 aa6.66□□□□□ -1.34
ATG3-204ENST00000467275 SNX33Q8WV41 574 aa6.66□□□□□ -1.34
ATG3-204ENST00000467275 MYEOVQ96EZ4 313 aa6.66□□□□□ -1.34
ATG3-204ENST00000467275 PRDM12Q9H4Q4 367 aa6.66□□□□□ -1.34
ATG3-204ENST00000467275 CYP4F11Q9HBI6 524 aa6.66□□□□□ -1.34
ATG3-204ENST00000467275 MAPRE3Q9UPY8 281 aa6.66□□□□□ -1.34
ATG3-204ENST00000467275 ZMYM3Q14202 1370 aa6.66□□□□□ -1.34
ATG3-204ENST00000467275 A0A087X0B3 334 aa6.65□□□□□ -1.34
ATG3-204ENST00000467275 RNASET2O00584 256 aaKnown RBP6.65□□□□□ -1.34
ATG3-204ENST00000467275 ITGA10O75578 1167 aa6.65□□□□□ -1.34
ATG3-204ENST00000467275 ZFP36P26651 326 aaKnown RBP6.65□□□□□ -1.34
ATG3-204ENST00000467275 RNASE9P60153 205 aaKnown RBP6.65□□□□□ -1.34
ATG3-204ENST00000467275 FAM189BP81408 668 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms