RNA–Protein interactions for RNA: ENST00000466923.5

KPNA1-204, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 3,316 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-204ENST00000466923 TBX20Q9UMR3 447 aa5.43□□□□□ -1.54
KPNA1-204ENST00000466923 INPP5FQ9Y2H2 1132 aa5.43□□□□□ -1.54
KPNA1-204ENST00000466923 PPME1Q9Y570 386 aa5.43□□□□□ -1.54
KPNA1-204ENST00000466923 TRPV2Q9Y5S1 764 aa5.43□□□□□ -1.54
KPNA1-204ENST00000466923 NR2E3Q9Y5X4 410 aa5.43□□□□□ -1.54
KPNA1-204ENST00000466923 COL1A2P08123 1366 aa5.42□□□□□ -1.54
KPNA1-204ENST00000466923 SMC2O95347 1197 aa5.42□□□□□ -1.54
KPNA1-204ENST00000466923 MBD3O95983 291 aa5.42□□□□□ -1.54
KPNA1-204ENST00000466923 ZSCAN20P17040 1043 aaPredicted RBP5.42□□□□□ -1.54
KPNA1-204ENST00000466923 HOXA11P31270 313 aaPredicted RBP5.42□□□□□ -1.54
KPNA1-204ENST00000466923 HOXD13P35453 343 aa5.42□□□□□ -1.54
KPNA1-204ENST00000466923 NAMPTP43490 491 aa5.42□□□□□ -1.54
KPNA1-204ENST00000466923 GATMP50440 423 aa5.42□□□□□ -1.54
KPNA1-204ENST00000466923 NUBP1P53384 320 aa5.42□□□□□ -1.54
KPNA1-204ENST00000466923 MLLT1Q03111 559 aaPredicted RBP5.42□□□□□ -1.54
KPNA1-204ENST00000466923 MBTD1Q05BQ5 628 aa5.42□□□□□ -1.54
KPNA1-204ENST00000466923 TFDP1Q14186 410 aa5.42□□□□□ -1.54
KPNA1-204ENST00000466923 PAN2Q504Q3 1202 aaKnown RBP5.42□□□□□ -1.54
KPNA1-204ENST00000466923 FAM109BQ6ICB4 259 aaPredicted RBP5.42□□□□□ -1.54
KPNA1-204ENST00000466923 MFSD5Q6N075 450 aa5.42□□□□□ -1.54
KPNA1-204ENST00000466923 VWCEQ96DN2 955 aa5.42□□□□□ -1.54
KPNA1-204ENST00000466923 PLCD4Q9BRC7 762 aa5.42□□□□□ -1.54
KPNA1-204ENST00000466923 CBWD1Q9BRT8 395 aa5.42□□□□□ -1.54
KPNA1-204ENST00000466923 TMX1Q9H3N1 280 aa5.42□□□□□ -1.54
KPNA1-204ENST00000466923 MYH15Q9Y2K3 1946 aa5.42□□□□□ -1.54
KPNA1-204ENST00000466923 FGFR1P11362 822 aa5.42□□□□□ -1.54
KPNA1-204ENST00000466923 CAPN2P17655 700 aa5.42□□□□□ -1.54
KPNA1-204ENST00000466923 PTMSP20962 102 aa5.42□□□□□ -1.54
KPNA1-204ENST00000466923 LIG4P49917 911 aa5.42□□□□□ -1.54
KPNA1-204ENST00000466923 RABGGTBP53611 331 aa5.42□□□□□ -1.54
KPNA1-204ENST00000466923 DEFB103AP81534 67 aa5.42□□□□□ -1.54
KPNA1-204ENST00000466923 KLHL40Q2TBA0 621 aa5.42□□□□□ -1.54
KPNA1-204ENST00000466923 GLRA4Q5JXX5 417 aa5.42□□□□□ -1.54
KPNA1-204ENST00000466923 SASS6Q6UVJ0 657 aa5.42□□□□□ -1.54
KPNA1-204ENST00000466923 CHRDL2Q6WN34 429 aa5.42□□□□□ -1.54
KPNA1-204ENST00000466923 EXOC8Q8IYI6 725 aa5.42□□□□□ -1.54
KPNA1-204ENST00000466923 NME8Q8N427 588 aa5.42□□□□□ -1.54
KPNA1-204ENST00000466923 TMEM199Q8N511 208 aa5.42□□□□□ -1.54
KPNA1-204ENST00000466923 CAGE1Q8TC20 777 aa5.42□□□□□ -1.54
KPNA1-204ENST00000466923 POMGNT1Q8WZA1 660 aa5.42□□□□□ -1.54
KPNA1-204ENST00000466923 ZFP42Q96MM3 310 aa5.42□□□□□ -1.54
KPNA1-204ENST00000466923 PYM1Q9BRP8 204 aaKnown RBP5.42□□□□□ -1.54
KPNA1-204ENST00000466923 GBP3Q9H0R5 595 aa5.42□□□□□ -1.54
KPNA1-204ENST00000466923 DNAJC25Q9H1X3 360 aa5.42□□□□□ -1.54
KPNA1-204ENST00000466923 MMRN2Q9H8L6 949 aa5.42□□□□□ -1.54
KPNA1-204ENST00000466923 HCSTQ9UBK5 93 aa5.42□□□□□ -1.54
KPNA1-204ENST00000466923 PARP2Q9UGN5 583 aa5.42□□□□□ -1.54
KPNA1-204ENST00000466923 ODF2LQ9ULJ1 636 aa5.42□□□□□ -1.54
KPNA1-204ENST00000466923 PCDHB13Q9Y5F0 798 aa5.42□□□□□ -1.54
KPNA1-204ENST00000466923 SCN5AQ14524 2016 aa5.42□□□□□ -1.54
KPNA1-204ENST00000466923 CLDN3O15551 220 aa5.41□□□□□ -1.54
KPNA1-204ENST00000466923 ASAP2O43150 1006 aa5.41□□□□□ -1.54
KPNA1-204ENST00000466923 TSPAN1O60635 241 aa5.41□□□□□ -1.54
KPNA1-204ENST00000466923 NPTXRO95502 500 aa5.41□□□□□ -1.54
KPNA1-204ENST00000466923 MAPTP10636 758 aaKnown RBP5.41□□□□□ -1.54
KPNA1-204ENST00000466923 MYOGP15173 224 aa5.41□□□□□ -1.54
KPNA1-204ENST00000466923 PBX3P40426 434 aa5.41□□□□□ -1.54
KPNA1-204ENST00000466923 TNFSF9P41273 254 aa5.41□□□□□ -1.54
KPNA1-204ENST00000466923 FPGSQ05932 587 aa5.41□□□□□ -1.54
KPNA1-204ENST00000466923 PTPN11Q06124 597 aaPredicted RBP5.41□□□□□ -1.54
KPNA1-204ENST00000466923 MGAT3Q09327 533 aa5.41□□□□□ -1.54
KPNA1-204ENST00000466923 PPP2R5AQ15172 486 aa5.41□□□□□ -1.54
KPNA1-204ENST00000466923 SHHQ15465 462 aa5.41□□□□□ -1.54
KPNA1-204ENST00000466923 PTPN21Q16825 1174 aa5.41□□□□□ -1.54
KPNA1-204ENST00000466923 ZSCAN23Q3MJ62 389 aa5.41□□□□□ -1.54
KPNA1-204ENST00000466923 CCDC183Q5T5S1 534 aa5.41□□□□□ -1.54
KPNA1-204ENST00000466923 NT5DC1Q5TFE4 455 aa5.41□□□□□ -1.54
KPNA1-204ENST00000466923 C1orf53Q5VUE5 145 aa5.41□□□□□ -1.54
KPNA1-204ENST00000466923 CEP135Q66GS9 1140 aa5.41□□□□□ -1.54
KPNA1-204ENST00000466923 LMBRD2Q68DH5 695 aaPredicted RBP5.41□□□□□ -1.54
KPNA1-204ENST00000466923 CCDC127Q96BQ5 260 aa5.41□□□□□ -1.54
KPNA1-204ENST00000466923 TIGD1Q96MW7 591 aa5.41□□□□□ -1.54
KPNA1-204ENST00000466923 LRRC27Q9C0I9 530 aa5.41□□□□□ -1.54
KPNA1-204ENST00000466923 HAPLN2Q9GZV7 340 aa5.41□□□□□ -1.54
KPNA1-204ENST00000466923 NXF3Q9H4D5 531 aaKnown RBP5.41□□□□□ -1.54
KPNA1-204ENST00000466923 CERS4Q9HA82 394 aa5.41□□□□□ -1.54
KPNA1-204ENST00000466923 ARHGAP28Q9P2N2 729 aa5.41□□□□□ -1.54
KPNA1-204ENST00000466923 PITPNM1O00562 1244 aa5.41□□□□□ -1.54
KPNA1-204ENST00000466923 KIAA0355O15063 1070 aa5.41□□□□□ -1.54
KPNA1-204ENST00000466923 GPR182O15218 404 aa5.41□□□□□ -1.54
KPNA1-204ENST00000466923 SFPQP23246 707 aaKnown RBP eCLIP5.41□□□□□ -1.54
KPNA1-204ENST00000466923 ADSSP30520 456 aa5.41□□□□□ -1.54
KPNA1-204ENST00000466923 SARSP49591 514 aaKnown RBP5.41□□□□□ -1.54
KPNA1-204ENST00000466923 ZNF131P52739 623 aa5.41□□□□□ -1.54
KPNA1-204ENST00000466923 NCBP1Q09161 790 aaKnown RBP5.41□□□□□ -1.54
KPNA1-204ENST00000466923 ZNF568Q3ZCX4 644 aa5.41□□□□□ -1.54
KPNA1-204ENST00000466923 ATF7IP2Q5U623 682 aa5.41□□□□□ -1.54
KPNA1-204ENST00000466923 SPRED2Q7Z698 418 aa5.41□□□□□ -1.54
KPNA1-204ENST00000466923 CCDC47Q96A33 483 aaKnown RBP5.41□□□□□ -1.54
KPNA1-204ENST00000466923 PBXIP1Q96AQ6 731 aa5.41□□□□□ -1.54
KPNA1-204ENST00000466923 GSDMAQ96QA5 445 aa5.41□□□□□ -1.54
KPNA1-204ENST00000466923 POP1Q99575 1024 aaKnown RBP5.41□□□□□ -1.54
KPNA1-204ENST00000466923 FAM213AQ9BRX8 229 aa5.41□□□□□ -1.54
KPNA1-204ENST00000466923 NTPCRQ9BSD7 190 aaKnown RBP5.41□□□□□ -1.54
KPNA1-204ENST00000466923 ZBED2Q9BTP6 218 aa5.41□□□□□ -1.54
KPNA1-204ENST00000466923 UBE2OQ9C0C9 1292 aaKnown RBP5.41□□□□□ -1.54
KPNA1-204ENST00000466923 SNTG2Q9NY99 539 aa5.41□□□□□ -1.54
KPNA1-204ENST00000466923 KCND2Q9NZV8 630 aa5.41□□□□□ -1.54
KPNA1-204ENST00000466923 USP25Q9UHP3 1055 aa5.41□□□□□ -1.54
KPNA1-204ENST00000466923 CTNND2Q9UQB3 1225 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms