RNA–Protein interactions for RNA: ENST00000466845.1

LRCH3-212, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-212ENST00000466845 BTG4Q9NY30 223 aa6.43□□□□□ -1.38
LRCH3-212ENST00000466845 ZIM2Q9NZV7 527 aa6.43□□□□□ -1.38
LRCH3-212ENST00000466845 SIRPGQ9P1W8 387 aa6.43□□□□□ -1.38
LRCH3-212ENST00000466845 TMEFF2Q9UIK5 374 aaPredicted RBP6.43□□□□□ -1.38
LRCH3-212ENST00000466845 CFAP45Q9UL16 551 aa6.43□□□□□ -1.38
LRCH3-212ENST00000466845 SQORQ9Y6N5 450 aa6.43□□□□□ -1.38
LRCH3-212ENST00000466845 BRD4O60885 1362 aaPredicted RBP6.43□□□□□ -1.38
LRCH3-212ENST00000466845 TRIM64A6NGJ6 449 aa6.42□□□□□ -1.38
LRCH3-212ENST00000466845 TRIM64BA6NI03 449 aa6.42□□□□□ -1.38
LRCH3-212ENST00000466845 RASSF10A6NK89 507 aa6.42□□□□□ -1.38
LRCH3-212ENST00000466845 TMCO5BA8MYB1 307 aa6.42□□□□□ -1.38
LRCH3-212ENST00000466845 SKAP2O75563 359 aaPredicted RBP6.42□□□□□ -1.38
LRCH3-212ENST00000466845 MTRF1O75570 445 aaKnown RBP6.42□□□□□ -1.38
LRCH3-212ENST00000466845 FGFR1P11362 822 aa6.42□□□□□ -1.38
LRCH3-212ENST00000466845 PRPHP41219 470 aa6.42□□□□□ -1.38
LRCH3-212ENST00000466845 MC3RP41968 323 aa6.42□□□□□ -1.38
LRCH3-212ENST00000466845 NKX3-2P78367 333 aa6.42□□□□□ -1.38
LRCH3-212ENST00000466845 SARNPP82979 210 aaKnown RBP6.42□□□□□ -1.38
LRCH3-212ENST00000466845 SHROOM1Q2M3G4 852 aaPredicted RBP6.42□□□□□ -1.38
LRCH3-212ENST00000466845 RILPL1Q5EBL4 403 aa6.42□□□□□ -1.38
LRCH3-212ENST00000466845 HOMER1Q86YM7 354 aa6.42□□□□□ -1.38
LRCH3-212ENST00000466845 TRIM48Q8IWZ4 208 aa6.42□□□□□ -1.38
LRCH3-212ENST00000466845 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.42□□□□□ -1.38
LRCH3-212ENST00000466845 FEZF2Q8TBJ5 459 aa6.42□□□□□ -1.38
LRCH3-212ENST00000466845 DCAF4Q8WV16 495 aa6.42□□□□□ -1.38
LRCH3-212ENST00000466845 ANKRD49Q8WVL7 239 aa6.42□□□□□ -1.38
LRCH3-212ENST00000466845 ZNF75CPQ92670 426 aaPredicted RBP6.42□□□□□ -1.38
LRCH3-212ENST00000466845 CHAMP1Q96JM3 812 aa6.42□□□□□ -1.38
LRCH3-212ENST00000466845 DEPDC7Q96QD5 511 aa6.42□□□□□ -1.38
LRCH3-212ENST00000466845 UIMC1Q96RL1 719 aa6.42□□□□□ -1.38
LRCH3-212ENST00000466845 SLC39A3Q9BRY0 314 aa6.42□□□□□ -1.38
LRCH3-212ENST00000466845 AARSD1Q9BTE6 412 aaKnown RBP6.42□□□□□ -1.38
LRCH3-212ENST00000466845 C11orf84Q9BUA3 381 aaPredicted RBP6.42□□□□□ -1.38
LRCH3-212ENST00000466845 LGR4Q9BXB1 951 aa6.42□□□□□ -1.38
LRCH3-212ENST00000466845 USP40Q9NVE5 1235 aa6.42□□□□□ -1.38
LRCH3-212ENST00000466845 CPSF2Q9P2I0 782 aaKnown RBP6.42□□□□□ -1.38
LRCH3-212ENST00000466845 PALD1Q9ULE6 856 aa6.42□□□□□ -1.38
LRCH3-212ENST00000466845 PCDHA2Q9Y5H9 948 aa6.42□□□□□ -1.38
LRCH3-212ENST00000466845 MORC2Q9Y6X9 1032 aaPredicted RBP6.42□□□□□ -1.38
LRCH3-212ENST00000466845 MAGI3Q5TCQ9 1506 aa6.41□□□□□ -1.38
LRCH3-212ENST00000466845 KRTAP9-7A8MTY7 169 aa6.41□□□□□ -1.38
LRCH3-212ENST00000466845 F8VZ95 297 aa6.41□□□□□ -1.38
LRCH3-212ENST00000466845 K7ENM7 598 aa6.41□□□□□ -1.38
LRCH3-212ENST00000466845 ARNTLO00327 626 aa6.41□□□□□ -1.38
LRCH3-212ENST00000466845 KRIT1O00522 736 aa6.41□□□□□ -1.38
LRCH3-212ENST00000466845 PRPF3O43395 683 aaKnown RBP6.41□□□□□ -1.38
LRCH3-212ENST00000466845 TMCC2O75069 709 aa6.41□□□□□ -1.38
LRCH3-212ENST00000466845 TADA3O75528 432 aa6.41□□□□□ -1.38
LRCH3-212ENST00000466845 KRT38O76015 456 aa6.41□□□□□ -1.38
LRCH3-212ENST00000466845 HSPA5P11021 654 aaKnown RBP6.41□□□□□ -1.38
LRCH3-212ENST00000466845 TRIM27P14373 513 aa6.41□□□□□ -1.38
LRCH3-212ENST00000466845 RENBPP51606 427 aa6.41□□□□□ -1.38
LRCH3-212ENST00000466845 RCAN1P53805 252 aa6.41□□□□□ -1.38
LRCH3-212ENST00000466845 GABREP78334 506 aa6.41□□□□□ -1.38
LRCH3-212ENST00000466845 PURAQ00577 322 aaKnown RBP6.41□□□□□ -1.38
LRCH3-212ENST00000466845 DLX2Q07687 328 aaPredicted RBP6.41□□□□□ -1.38
LRCH3-212ENST00000466845 MRPL28Q13084 256 aaKnown RBP6.41□□□□□ -1.38
LRCH3-212ENST00000466845 CHAF1AQ13111 956 aaPredicted RBP6.41□□□□□ -1.38
LRCH3-212ENST00000466845 KRT72Q14CN4 511 aa6.41□□□□□ -1.38
LRCH3-212ENST00000466845 RABL6Q3YEC7 729 aaPredicted RBP6.41□□□□□ -1.38
LRCH3-212ENST00000466845 CFAP58Q5T655 872 aa6.41□□□□□ -1.38
LRCH3-212ENST00000466845 FAAH2Q6GMR7 532 aa6.41□□□□□ -1.38
LRCH3-212ENST00000466845 CD300LDQ6UXZ3 194 aa6.41□□□□□ -1.38
LRCH3-212ENST00000466845 CELF2-AS1Q8N7Q2 184 aa6.41□□□□□ -1.38
LRCH3-212ENST00000466845 OR8H1Q8NGG4 311 aa6.41□□□□□ -1.38
LRCH3-212ENST00000466845 LILRB1Q8NHL6 650 aaPredicted RBP6.41□□□□□ -1.38
LRCH3-212ENST00000466845 AFAP1L1Q8TED9 768 aa6.41□□□□□ -1.38
LRCH3-212ENST00000466845 MAML1Q92585 1016 aa6.41□□□□□ -1.38
LRCH3-212ENST00000466845 JAKMIP2Q96AA8 810 aa6.41□□□□□ -1.38
LRCH3-212ENST00000466845 ZBTB8AQ96BR9 441 aa6.41□□□□□ -1.38
LRCH3-212ENST00000466845 C1orf74Q96LT6 269 aa6.41□□□□□ -1.38
LRCH3-212ENST00000466845 STRBPQ96SI9 672 aaKnown RBP6.41□□□□□ -1.38
LRCH3-212ENST00000466845 BAG1Q99933 345 aaPredicted RBP6.41□□□□□ -1.38
LRCH3-212ENST00000466845 YIPF4Q9BSR8 244 aa6.41□□□□□ -1.38
LRCH3-212ENST00000466845 MRPL9Q9BYD2 267 aaKnown RBP6.41□□□□□ -1.38
LRCH3-212ENST00000466845 PNNQ9H307 717 aaKnown RBP6.41□□□□□ -1.38
LRCH3-212ENST00000466845 SMOC1Q9H4F8 434 aa6.41□□□□□ -1.38
LRCH3-212ENST00000466845 CYP4F11Q9HBI6 524 aa6.41□□□□□ -1.38
LRCH3-212ENST00000466845 ST7Q9NRC1 585 aa6.41□□□□□ -1.38
LRCH3-212ENST00000466845 CLDND1Q9NY35 253 aa6.41□□□□□ -1.38
LRCH3-212ENST00000466845 HSPBP1Q9NZL4 362 aa6.41□□□□□ -1.38
LRCH3-212ENST00000466845 BLOC1S6Q9UL45 172 aa6.41□□□□□ -1.38
LRCH3-212ENST00000466845 PLA2G2DQ9UNK4 145 aa6.41□□□□□ -1.38
LRCH3-212ENST00000466845 SIT1Q9Y3P8 196 aa6.41□□□□□ -1.38
LRCH3-212ENST00000466845 ATP6V0A2Q9Y487 856 aa6.41□□□□□ -1.38
LRCH3-212ENST00000466845 SLC30A1Q9Y6M5 507 aa6.41□□□□□ -1.38
LRCH3-212ENST00000466845 ATP10BO94823 1461 aa6.41□□□□□ -1.38
LRCH3-212ENST00000466845 LINC00854A0A1B0GVQ3 168 aa6.4□□□□□ -1.38
LRCH3-212ENST00000466845 ALG1L2C9J202 215 aa6.4□□□□□ -1.38
LRCH3-212ENST00000466845 RASA4BC9J798 803 aa6.4□□□□□ -1.38
LRCH3-212ENST00000466845 H0YHG0 523 aa6.4□□□□□ -1.38
LRCH3-212ENST00000466845 ELL2O00472 640 aaPredicted RBP6.4□□□□□ -1.38
LRCH3-212ENST00000466845 RASA4O43374 803 aa6.4□□□□□ -1.38
LRCH3-212ENST00000466845 RASGRP1O95267 797 aa6.4□□□□□ -1.38
LRCH3-212ENST00000466845 C8BP07358 591 aa6.4□□□□□ -1.38
LRCH3-212ENST00000466845 SFTPCP11686 197 aa6.4□□□□□ -1.38
LRCH3-212ENST00000466845 FPR2P25090 351 aa6.4□□□□□ -1.38
LRCH3-212ENST00000466845 RPL13P26373 211 aaKnown RBP6.4□□□□□ -1.38
LRCH3-212ENST00000466845 MRE11P49959 708 aa6.4□□□□□ -1.38
LRCH3-212ENST00000466845 PAPOLAP51003 745 aaKnown RBP6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms