RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 PAWRQ96IZ0 340 aaKnown RBP5.39□□□□□ -1.55
VPS13D-203ENST00000466732 TTBK1Q5TCY1 1321 aaPredicted RBP5.39□□□□□ -1.55
VPS13D-203ENST00000466732 IPO13O94829 963 aaKnown RBP5.38□□□□□ -1.55
VPS13D-203ENST00000466732 MTHFD2P13995 350 aa5.38□□□□□ -1.55
VPS13D-203ENST00000466732 GNAT2P19087 354 aa5.38□□□□□ -1.55
VPS13D-203ENST00000466732 MAN2A2P49641 1150 aa5.38□□□□□ -1.55
VPS13D-203ENST00000466732 GZMKP49863 264 aa5.38□□□□□ -1.55
VPS13D-203ENST00000466732 RABGGTBP53611 331 aa5.38□□□□□ -1.55
VPS13D-203ENST00000466732 ERVK-21P61565 698 aa5.38□□□□□ -1.55
VPS13D-203ENST00000466732 DGCR2P98153 550 aa5.38□□□□□ -1.55
VPS13D-203ENST00000466732 SRSF2Q01130 221 aaKnown RBP5.38□□□□□ -1.55
VPS13D-203ENST00000466732 MRPL49Q13405 166 aaKnown RBP5.38□□□□□ -1.55
VPS13D-203ENST00000466732 CNGB1Q14028 1251 aaPredicted RBP5.38□□□□□ -1.55
VPS13D-203ENST00000466732 TOR2AQ5JU69 321 aa5.38□□□□□ -1.55
VPS13D-203ENST00000466732 C1QL3Q5VWW1 255 aa5.38□□□□□ -1.55
VPS13D-203ENST00000466732 LILRA3Q8N6C8 439 aaPredicted RBP5.38□□□□□ -1.55
VPS13D-203ENST00000466732 GLB1L3Q8NCI6 653 aaPredicted RBP5.38□□□□□ -1.55
VPS13D-203ENST00000466732 ATXN2LQ8WWM7 1075 aaKnown RBP5.38□□□□□ -1.55
VPS13D-203ENST00000466732 ST8SIA2Q92186 375 aa5.38□□□□□ -1.55
VPS13D-203ENST00000466732 PLEKHG4BQ96PX9 1271 aa5.38□□□□□ -1.55
VPS13D-203ENST00000466732 GPR87Q9BY21 358 aa5.38□□□□□ -1.55
VPS13D-203ENST00000466732 ZNF341Q9BYN7 854 aa5.38□□□□□ -1.55
VPS13D-203ENST00000466732 EPC1Q9H2F5 836 aa5.38□□□□□ -1.55
VPS13D-203ENST00000466732 ZNF703Q9H7S9 590 aaPredicted RBP5.38□□□□□ -1.55
VPS13D-203ENST00000466732 IFT122Q9HBG6 1241 aa5.38□□□□□ -1.55
VPS13D-203ENST00000466732 CEP72Q9P209 647 aa5.38□□□□□ -1.55
VPS13D-203ENST00000466732 ATP8A1Q9Y2Q0 1164 aa5.38□□□□□ -1.55
VPS13D-203ENST00000466732 KLRG2A4D1S0 409 aaPredicted RBP5.37□□□□□ -1.55
VPS13D-203ENST00000466732 K7ESF4 209 aa5.37□□□□□ -1.55
VPS13D-203ENST00000466732 CANXP27824 592 aaKnown RBP5.37□□□□□ -1.55
VPS13D-203ENST00000466732 PTH1RQ03431 593 aa5.37□□□□□ -1.55
VPS13D-203ENST00000466732 BTNL9Q6UXG8 535 aa5.37□□□□□ -1.55
VPS13D-203ENST00000466732 HTR3DQ70Z44 454 aa5.37□□□□□ -1.55
VPS13D-203ENST00000466732 CACTINQ8WUQ7 758 aaKnown RBP5.37□□□□□ -1.55
VPS13D-203ENST00000466732 RIN2Q8WYP3 895 aaPredicted RBP5.37□□□□□ -1.55
VPS13D-203ENST00000466732 MNTQ99583 582 aa5.37□□□□□ -1.55
VPS13D-203ENST00000466732 CPPED1Q9BRF8 314 aaPredicted RBP5.37□□□□□ -1.55
VPS13D-203ENST00000466732 CSRNP2Q9H175 543 aa5.37□□□□□ -1.55
VPS13D-203ENST00000466732 TMPRSS5Q9H3S3 457 aa5.37□□□□□ -1.55
VPS13D-203ENST00000466732 CCM2LQ9NUG4 571 aaPredicted RBP5.37□□□□□ -1.55
VPS13D-203ENST00000466732 DNAJC28Q9NX36 388 aa5.37□□□□□ -1.55
VPS13D-203ENST00000466732 SLC5A4Q9NY91 659 aa5.37□□□□□ -1.55
VPS13D-203ENST00000466732 GPRC5DQ9NZD1 345 aa5.37□□□□□ -1.55
VPS13D-203ENST00000466732 XDHP47989 1333 aa5.37□□□□□ -1.55
VPS13D-203ENST00000466732 RPTORQ8N122 1335 aa5.37□□□□□ -1.55
VPS13D-203ENST00000466732 ITGA10O75578 1167 aa5.36□□□□□ -1.55
VPS13D-203ENST00000466732 HK1P19367 917 aa5.36□□□□□ -1.55
VPS13D-203ENST00000466732 APBA1Q02410 837 aa5.36□□□□□ -1.55
VPS13D-203ENST00000466732 ADRM1Q16186 407 aa5.36□□□□□ -1.55
VPS13D-203ENST00000466732 LSM12Q3MHD2 195 aaKnown RBP5.36□□□□□ -1.55
VPS13D-203ENST00000466732 DCAF17Q5H9S7 520 aaPredicted RBP5.36□□□□□ -1.55
VPS13D-203ENST00000466732 NECAB2Q7Z6G3 386 aa5.36□□□□□ -1.55
VPS13D-203ENST00000466732 FAM83AQ86UY5 434 aa5.36□□□□□ -1.55
VPS13D-203ENST00000466732 CNTD1Q8N815 330 aa5.36□□□□□ -1.55
VPS13D-203ENST00000466732 ZNF480Q8WV37 535 aa5.36□□□□□ -1.55
VPS13D-203ENST00000466732 FATE1Q969F0 183 aa5.36□□□□□ -1.55
VPS13D-203ENST00000466732 PGBD4Q96DM1 585 aa5.36□□□□□ -1.55
VPS13D-203ENST00000466732 CDC5LQ99459 802 aaKnown RBP5.36□□□□□ -1.55
VPS13D-203ENST00000466732 PDCD2LQ9BRP1 358 aa5.36□□□□□ -1.55
VPS13D-203ENST00000466732 LSM14BQ9BX40 385 aaKnown RBP5.36□□□□□ -1.55
VPS13D-203ENST00000466732 ACE2Q9BYF1 805 aaPredicted RBP5.36□□□□□ -1.55
VPS13D-203ENST00000466732 PUS7LQ9H0K6 701 aaKnown RBP5.36□□□□□ -1.55
VPS13D-203ENST00000466732 PARPBPQ9NWS1 579 aa5.36□□□□□ -1.55
VPS13D-203ENST00000466732 SCOCQ9UIL1 159 aa5.36□□□□□ -1.55
VPS13D-203ENST00000466732 WASHC2AQ641Q2 1341 aa5.36□□□□□ -1.55
VPS13D-203ENST00000466732 ZMYM3Q14202 1370 aa5.35□□□□□ -1.55
VPS13D-203ENST00000466732 GOLGA6L6A8MZA4 724 aa5.35□□□□□ -1.55
VPS13D-203ENST00000466732 NPIPB8E9PQR5 432 aa5.35□□□□□ -1.55
VPS13D-203ENST00000466732 AKR1B10O60218 316 aa5.35□□□□□ -1.55
VPS13D-203ENST00000466732 PHF2O75151 1096 aa5.35□□□□□ -1.55
VPS13D-203ENST00000466732 FSHBP01225 129 aa5.35□□□□□ -1.55
VPS13D-203ENST00000466732 ADSLP30566 484 aaPredicted RBP5.35□□□□□ -1.55
VPS13D-203ENST00000466732 MTNR1BP49286 362 aa5.35□□□□□ -1.55
VPS13D-203ENST00000466732 AMPD3Q01432 767 aa5.35□□□□□ -1.55
VPS13D-203ENST00000466732 KLF1Q13351 362 aaPredicted RBP5.35□□□□□ -1.55
VPS13D-203ENST00000466732 NAIF1Q69YI7 327 aaPredicted RBP5.35□□□□□ -1.55
VPS13D-203ENST00000466732 DOK3Q7L591 496 aa5.35□□□□□ -1.55
VPS13D-203ENST00000466732 XYLT1Q86Y38 959 aa5.35□□□□□ -1.55
VPS13D-203ENST00000466732 GPR156Q8NFN8 814 aa5.35□□□□□ -1.55
VPS13D-203ENST00000466732 MDM1Q8TC05 714 aa5.35□□□□□ -1.55
VPS13D-203ENST00000466732 CPEB1Q9BZB8 566 aaKnown RBP5.35□□□□□ -1.55
VPS13D-203ENST00000466732 TRIM8Q9BZR9 551 aa5.35□□□□□ -1.55
VPS13D-203ENST00000466732 ADCY6O43306 1168 aa5.34□□□□□ -1.55
VPS13D-203ENST00000466732 FZD7O75084 574 aa5.34□□□□□ -1.55
VPS13D-203ENST00000466732 GASTP01350 101 aa5.34□□□□□ -1.55
VPS13D-203ENST00000466732 OSMP13725 252 aa5.34□□□□□ -1.55
VPS13D-203ENST00000466732 CRHR1P34998 444 aa5.34□□□□□ -1.55
VPS13D-203ENST00000466732 CDKN1CP49918 316 aaPredicted RBP5.34□□□□□ -1.55
VPS13D-203ENST00000466732 SLC5A3P53794 718 aa5.34□□□□□ -1.55
VPS13D-203ENST00000466732 TUBA3CQ13748 450 aa5.34□□□□□ -1.55
VPS13D-203ENST00000466732 TOB2Q14106 344 aaPredicted RBP5.34□□□□□ -1.55
VPS13D-203ENST00000466732 MST1LQ2TV78 715 aa5.34□□□□□ -1.55
VPS13D-203ENST00000466732 ANO4Q32M45 955 aa5.34□□□□□ -1.55
VPS13D-203ENST00000466732 MUM1L1Q5H9M0 696 aa5.34□□□□□ -1.55
VPS13D-203ENST00000466732 METTL24Q5JXM2 366 aa5.34□□□□□ -1.55
VPS13D-203ENST00000466732 IGFL4Q6B9Z1 124 aa5.34□□□□□ -1.55
VPS13D-203ENST00000466732 TUBA3EQ6PEY2 450 aa5.34□□□□□ -1.55
VPS13D-203ENST00000466732 SLC16A11Q8NCK7 471 aa5.34□□□□□ -1.55
VPS13D-203ENST00000466732 OR52N2Q8NGI0 321 aa5.34□□□□□ -1.55
VPS13D-203ENST00000466732 MENTQ9BUN1 341 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms