RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 LIG1P18858 919 aa19.43■□□□□ 0.7
COL7A1-206ENST00000466591 HOXA11P31270 313 aaPredicted RBP19.43■□□□□ 0.7
COL7A1-206ENST00000466591 MLH1P40692 756 aa19.43■□□□□ 0.7
COL7A1-206ENST00000466591 MTHFRP42898 656 aa19.43■□□□□ 0.7
COL7A1-206ENST00000466591 TTC38Q5R3I4 469 aa19.43■□□□□ 0.7
COL7A1-206ENST00000466591 SYCE2Q6PIF2 218 aa19.43■□□□□ 0.7
COL7A1-206ENST00000466591 ASAP3Q8TDY4 903 aa19.43■□□□□ 0.7
COL7A1-206ENST00000466591 SUSD6Q92537 303 aa19.43■□□□□ 0.7
COL7A1-206ENST00000466591 MTMR9Q96QG7 549 aa19.43■□□□□ 0.7
COL7A1-206ENST00000466591 EIF2AQ9BY44 585 aaKnown RBP19.43■□□□□ 0.7
COL7A1-206ENST00000466591 CSRNP2Q9H175 543 aa19.43■□□□□ 0.7
COL7A1-206ENST00000466591 FOXP1Q9H334 677 aaPredicted RBP19.43■□□□□ 0.7
COL7A1-206ENST00000466591 PARP2Q9UGN5 583 aa19.43■□□□□ 0.7
COL7A1-206ENST00000466591 SSX2IPQ9Y2D8 614 aa19.43■□□□□ 0.7
COL7A1-206ENST00000466591 KIF3AQ9Y496 699 aa19.43■□□□□ 0.7
COL7A1-206ENST00000466591 ARL2P36404 184 aa19.42■□□□□ 0.7
COL7A1-206ENST00000466591 MBTD1Q05BQ5 628 aa19.42■□□□□ 0.7
COL7A1-206ENST00000466591 ORC2Q13416 577 aaPredicted RBP19.42■□□□□ 0.7
COL7A1-206ENST00000466591 ATAT1Q5SQI0 421 aa19.42■□□□□ 0.7
COL7A1-206ENST00000466591 UBXN11Q5T124 520 aa19.42■□□□□ 0.7
COL7A1-206ENST00000466591 HFE2Q6ZVN8 426 aa19.42■□□□□ 0.7
COL7A1-206ENST00000466591 PBXIP1Q96AQ6 731 aa19.42■□□□□ 0.7
COL7A1-206ENST00000466591 GAD1Q99259 594 aa19.42■□□□□ 0.7
COL7A1-206ENST00000466591 RAB34Q9BZG1 259 aa19.42■□□□□ 0.7
COL7A1-206ENST00000466591 S1PR5Q9H228 398 aa19.42■□□□□ 0.7
COL7A1-206ENST00000466591 TMEM60Q9H2L4 133 aa19.42■□□□□ 0.7
COL7A1-206ENST00000466591 ADAM7Q9H2U9 754 aa19.42■□□□□ 0.7
COL7A1-206ENST00000466591 TMEM221A6NGB7 291 aa19.41■□□□□ 0.7
COL7A1-206ENST00000466591 ARL5CA6NH57 179 aa19.41■□□□□ 0.7
COL7A1-206ENST00000466591 M0R296 226 aa19.41■□□□□ 0.7
COL7A1-206ENST00000466591 WNT7AO00755 349 aa19.41■□□□□ 0.7
COL7A1-206ENST00000466591 NRP1O14786 923 aa19.41■□□□□ 0.7
COL7A1-206ENST00000466591 DDHD2O94830 711 aa19.41■□□□□ 0.7
COL7A1-206ENST00000466591 NPTXRO95502 500 aa19.41■□□□□ 0.7
COL7A1-206ENST00000466591 GLRA2P23416 452 aa19.41■□□□□ 0.7
COL7A1-206ENST00000466591 POU5F1BQ06416 359 aa19.41■□□□□ 0.7
COL7A1-206ENST00000466591 KCNC3Q14003 757 aa19.41■□□□□ 0.7
COL7A1-206ENST00000466591 SLC27A1Q6PCB7 646 aa19.41■□□□□ 0.7
COL7A1-206ENST00000466591 TRIM67Q6ZTA4 783 aa19.41■□□□□ 0.7
COL7A1-206ENST00000466591 CATSPER3Q86XQ3 398 aa19.41■□□□□ 0.7
COL7A1-206ENST00000466591 COLEC11Q9BWP8 271 aa19.41■□□□□ 0.7
COL7A1-206ENST00000466591 C2orf40Q9H1Z8 148 aa19.41■□□□□ 0.7
COL7A1-206ENST00000466591 UPF2Q9HAU5 1272 aaKnown RBP19.41■□□□□ 0.7
COL7A1-206ENST00000466591 PRMT7Q9NVM4 692 aaPredicted RBP19.41■□□□□ 0.7
COL7A1-206ENST00000466591 HES2Q9Y543 173 aa19.41■□□□□ 0.7
COL7A1-206ENST00000466591 EPCAMP16422 314 aa19.4■□□□□ 0.7
COL7A1-206ENST00000466591 ARF4P18085 180 aaPredicted RBP19.4■□□□□ 0.7
COL7A1-206ENST00000466591 CCT6AP40227 531 aaKnown RBP19.4■□□□□ 0.7
COL7A1-206ENST00000466591 SCNN1GP51170 649 aa19.4■□□□□ 0.7
COL7A1-206ENST00000466591 ZXDAP98168 799 aa19.4■□□□□ 0.7
COL7A1-206ENST00000466591 PTPN14Q15678 1187 aa19.4■□□□□ 0.7
COL7A1-206ENST00000466591 POTEGQ6S5H5 508 aa19.4■□□□□ 0.7
COL7A1-206ENST00000466591 NOSTRINQ8IVI9 506 aa19.4■□□□□ 0.7
COL7A1-206ENST00000466591 C12orf76Q8N812 135 aaPredicted RBP19.4■□□□□ 0.7
COL7A1-206ENST00000466591 TDRD5Q8NAT2 981 aaKnown RBP19.4■□□□□ 0.7
COL7A1-206ENST00000466591 SMG8Q8ND04 991 aaKnown RBP19.4■□□□□ 0.7
COL7A1-206ENST00000466591 DEPTORQ8TB45 409 aa19.4■□□□□ 0.7
COL7A1-206ENST00000466591 BCL7CQ8WUZ0 217 aaPredicted RBP19.4■□□□□ 0.7
COL7A1-206ENST00000466591 IFT74Q96LB3 600 aa19.4■□□□□ 0.7
COL7A1-206ENST00000466591 ADPGKQ9BRR6 497 aa19.4■□□□□ 0.7
COL7A1-206ENST00000466591 NFKBIZQ9BYH8 718 aa19.4■□□□□ 0.7
COL7A1-206ENST00000466591 NXF3Q9H4D5 531 aaKnown RBP19.4■□□□□ 0.7
COL7A1-206ENST00000466591 SFXN1Q9H9B4 322 aa19.4■□□□□ 0.7
COL7A1-206ENST00000466591 GPRC5CQ9NQ84 441 aa19.4■□□□□ 0.7
COL7A1-206ENST00000466591 DPP7Q9UHL4 492 aa19.4■□□□□ 0.7
COL7A1-206ENST00000466591 GIT1Q9Y2X7 761 aa19.4■□□□□ 0.7
COL7A1-206ENST00000466591 IRAK3Q9Y616 596 aa19.4■□□□□ 0.7
COL7A1-206ENST00000466591 ST18O60284 1047 aa19.39■□□□□ 0.69
COL7A1-206ENST00000466591 MED24O75448 989 aa19.39■□□□□ 0.69
COL7A1-206ENST00000466591 ADH1AP07327 375 aa19.39■□□□□ 0.69
COL7A1-206ENST00000466591 WEE2P0C1S8 567 aa19.39■□□□□ 0.69
COL7A1-206ENST00000466591 AKAP5P24588 427 aa19.39■□□□□ 0.69
COL7A1-206ENST00000466591 ST3GAL1Q11201 340 aa19.39■□□□□ 0.69
COL7A1-206ENST00000466591 PPP2R5AQ15172 486 aa19.39■□□□□ 0.69
COL7A1-206ENST00000466591 PADI6Q6TGC4 694 aa19.39■□□□□ 0.69
COL7A1-206ENST00000466591 TMC5Q6UXY8 1006 aa19.39■□□□□ 0.69
COL7A1-206ENST00000466591 CDR2LQ86X02 465 aaPredicted RBP19.39■□□□□ 0.69
COL7A1-206ENST00000466591 IFNLR1Q8IU57 520 aaPredicted RBP19.39■□□□□ 0.69
COL7A1-206ENST00000466591 FBXO18Q8NFZ0 1043 aa19.39■□□□□ 0.69
COL7A1-206ENST00000466591 ZFP42Q96MM3 310 aa19.39■□□□□ 0.69
COL7A1-206ENST00000466591 POLR3CQ9BUI4 534 aaPredicted RBP19.39■□□□□ 0.69
COL7A1-206ENST00000466591 POMKQ9H5K3 350 aa19.39■□□□□ 0.69
COL7A1-206ENST00000466591 LRWD1Q9UFC0 647 aa19.39■□□□□ 0.69
COL7A1-206ENST00000466591 B4GALT5O43286 388 aa19.38■□□□□ 0.69
COL7A1-206ENST00000466591 SOD2P04179 222 aa19.38■□□□□ 0.69
COL7A1-206ENST00000466591 RPA1P27694 616 aa19.38■□□□□ 0.69
COL7A1-206ENST00000466591 TRAPPC10P48553 1259 aa19.38■□□□□ 0.69
COL7A1-206ENST00000466591 GLUD2P49448 558 aa19.38■□□□□ 0.69
COL7A1-206ENST00000466591 AFF1P51825 1210 aaKnown RBP19.38■□□□□ 0.69
COL7A1-206ENST00000466591 PRPF4BQ13523 1007 aaKnown RBP19.38■□□□□ 0.69
COL7A1-206ENST00000466591 MAPK6Q16659 721 aa19.38■□□□□ 0.69
COL7A1-206ENST00000466591 PTPN21Q16825 1174 aa19.38■□□□□ 0.69
COL7A1-206ENST00000466591 MCTP1Q6DN14 999 aa19.38■□□□□ 0.69
COL7A1-206ENST00000466591 ACSF2Q96CM8 615 aaPredicted RBP19.38■□□□□ 0.69
COL7A1-206ENST00000466591 PRIMPOLQ96LW4 560 aa19.38■□□□□ 0.69
COL7A1-206ENST00000466591 FBXL18Q96ME1 805 aa19.38■□□□□ 0.69
COL7A1-206ENST00000466591 RNF39Q9H2S5 420 aa19.38■□□□□ 0.69
COL7A1-206ENST00000466591 KLK14Q9P0G3 267 aa19.38■□□□□ 0.69
COL7A1-206ENST00000466591 CDH22Q9UJ99 828 aa19.38■□□□□ 0.69
COL7A1-206ENST00000466591 STK24Q9Y6E0 443 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms