RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 KANSL3Q9P2N6 904 aa16.6■□□□□ 0.25
HMGXB4-206ENST00000466438 TMEM8BA6NDV4 472 aa16.59■□□□□ 0.25
HMGXB4-206ENST00000466438 CCR3P51677 355 aa16.59■□□□□ 0.25
HMGXB4-206ENST00000466438 AGMOQ6ZNB7 445 aa16.59■□□□□ 0.25
HMGXB4-206ENST00000466438 NIPA1Q7RTP0 329 aa16.59■□□□□ 0.25
HMGXB4-206ENST00000466438 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.59■□□□□ 0.25
HMGXB4-206ENST00000466438 PRG3Q9Y2Y8 225 aaPredicted RBP16.59■□□□□ 0.25
HMGXB4-206ENST00000466438 SHISA7A6NL88 538 aa16.58■□□□□ 0.24
HMGXB4-206ENST00000466438 DDAH1O94760 285 aa16.58■□□□□ 0.24
HMGXB4-206ENST00000466438 PLEKHA8P1O95397 391 aa16.58■□□□□ 0.24
HMGXB4-206ENST00000466438 PSAPP07602 524 aa16.58■□□□□ 0.24
HMGXB4-206ENST00000466438 CNR2P34972 360 aa16.58■□□□□ 0.24
HMGXB4-206ENST00000466438 GNAQP50148 359 aa16.58■□□□□ 0.24
HMGXB4-206ENST00000466438 AFF1P51825 1210 aaKnown RBP16.58■□□□□ 0.24
HMGXB4-206ENST00000466438 CDC42EP1Q00587 391 aa16.58■□□□□ 0.24
HMGXB4-206ENST00000466438 ZNF746Q6NUN9 644 aaPredicted RBP16.58■□□□□ 0.24
HMGXB4-206ENST00000466438 SKAP1Q86WV1 359 aa16.58■□□□□ 0.24
HMGXB4-206ENST00000466438 SMAP1Q8IYB5 467 aaPredicted RBP16.58■□□□□ 0.24
HMGXB4-206ENST00000466438 ZNF687Q8N1G0 1237 aa16.58■□□□□ 0.24
HMGXB4-206ENST00000466438 SRBD1Q8N5C6 995 aaKnown RBP16.58■□□□□ 0.24
HMGXB4-206ENST00000466438 RSAD1Q9HA92 442 aa16.58■□□□□ 0.24
HMGXB4-206ENST00000466438 HEBP1Q9NRV9 189 aa16.58■□□□□ 0.24
HMGXB4-206ENST00000466438 CHST7Q9NS84 486 aa16.58■□□□□ 0.24
HMGXB4-206ENST00000466438 FNIP2Q9P278 1114 aa16.58■□□□□ 0.24
HMGXB4-206ENST00000466438 GABBR1Q9UBS5 961 aa16.58■□□□□ 0.24
HMGXB4-206ENST00000466438 LHX6Q9UPM6 363 aa16.58■□□□□ 0.24
HMGXB4-206ENST00000466438 CNTNAP2Q9UHC6 1331 aa16.58■□□□□ 0.24
HMGXB4-206ENST00000466438 DOCK6Q96HP0 2047 aa16.57■□□□□ 0.24
HMGXB4-206ENST00000466438 IPO5O00410 1097 aaKnown RBP16.57■□□□□ 0.24
HMGXB4-206ENST00000466438 HRO43593 1189 aa16.57■□□□□ 0.24
HMGXB4-206ENST00000466438 KCNK5O95279 499 aa16.57■□□□□ 0.24
HMGXB4-206ENST00000466438 FOSP01100 380 aaPredicted RBP16.57■□□□□ 0.24
HMGXB4-206ENST00000466438 NTHL1P78549 312 aa16.57■□□□□ 0.24
HMGXB4-206ENST00000466438 TEX2Q8IWB9 1127 aa16.57■□□□□ 0.24
HMGXB4-206ENST00000466438 GPR65Q8IYL9 337 aa16.57■□□□□ 0.24
HMGXB4-206ENST00000466438 ZNF654Q8IZM8 581 aa16.57■□□□□ 0.24
HMGXB4-206ENST00000466438 C12orf50Q8NA57 414 aaPredicted RBP16.57■□□□□ 0.24
HMGXB4-206ENST00000466438 PGBD1Q96JS3 809 aa16.57■□□□□ 0.24
HMGXB4-206ENST00000466438 MBOAT7Q96N66 472 aa16.57■□□□□ 0.24
HMGXB4-206ENST00000466438 ANO3Q9BYT9 981 aa16.57■□□□□ 0.24
HMGXB4-206ENST00000466438 PCDHB2Q9Y5E7 798 aa16.57■□□□□ 0.24
HMGXB4-206ENST00000466438 PCDHA10Q9Y5I2 948 aa16.57■□□□□ 0.24
HMGXB4-206ENST00000466438 GCN1Q92616 2671 aaKnown RBP16.56■□□□□ 0.24
HMGXB4-206ENST00000466438 SRRM3A6NNA2 597 aaPredicted RBP16.56■□□□□ 0.24
HMGXB4-206ENST00000466438 HIP1O00291 1037 aa16.56■□□□□ 0.24
HMGXB4-206ENST00000466438 POMCP01189 267 aa16.56■□□□□ 0.24
HMGXB4-206ENST00000466438 HNRNPA1P09651 372 aaKnown RBP eCLIP16.56■□□□□ 0.24
HMGXB4-206ENST00000466438 ZNF76P36508 570 aa16.56■□□□□ 0.24
HMGXB4-206ENST00000466438 SREBF1P36956 1147 aa16.56■□□□□ 0.24
HMGXB4-206ENST00000466438 OR1G1P47890 313 aa16.56■□□□□ 0.24
HMGXB4-206ENST00000466438 RING1Q06587 406 aa16.56■□□□□ 0.24
HMGXB4-206ENST00000466438 RALYLQ86SE5 291 aaKnown RBP16.56■□□□□ 0.24
HMGXB4-206ENST00000466438 PLA2G4DQ86XP0 818 aa16.56■□□□□ 0.24
HMGXB4-206ENST00000466438 GLYCTKQ8IVS8 523 aa16.56■□□□□ 0.24
HMGXB4-206ENST00000466438 COLGALT2Q8IYK4 626 aa16.56■□□□□ 0.24
HMGXB4-206ENST00000466438 ITFG1Q8TB96 612 aa16.56■□□□□ 0.24
HMGXB4-206ENST00000466438 TMEM121BQ9BXQ6 578 aaPredicted RBP16.56■□□□□ 0.24
HMGXB4-206ENST00000466438 INO80BQ9C086 356 aaPredicted RBP16.56■□□□□ 0.24
HMGXB4-206ENST00000466438 TBC1D22BQ9NU19 505 aa16.56■□□□□ 0.24
HMGXB4-206ENST00000466438 TCEAL9Q9UHQ7 104 aa16.56■□□□□ 0.24
HMGXB4-206ENST00000466438 NDRG2Q9UN36 371 aaKnown RBP16.56■□□□□ 0.24
HMGXB4-206ENST00000466438 GREB1Q4ZG55 1949 aa16.55■□□□□ 0.24
HMGXB4-206ENST00000466438 A0A087WZ62 844 aa16.55■□□□□ 0.24
HMGXB4-206ENST00000466438 hCG_1642624A0A1W2PR95 340 aa16.55■□□□□ 0.24
HMGXB4-206ENST00000466438 FAM86B1E9PN63 330 aa16.55■□□□□ 0.24
HMGXB4-206ENST00000466438 MAN2B1O00754 1011 aa16.55■□□□□ 0.24
HMGXB4-206ENST00000466438 ECI2O75521 394 aa16.55■□□□□ 0.24
HMGXB4-206ENST00000466438 OATP04181 439 aa16.55■□□□□ 0.24
HMGXB4-206ENST00000466438 FAM86B2P0C5J1 330 aa16.55■□□□□ 0.24
HMGXB4-206ENST00000466438 CREMQ03060 361 aa16.55■□□□□ 0.24
HMGXB4-206ENST00000466438 DRP2Q13474 957 aa16.55■□□□□ 0.24
HMGXB4-206ENST00000466438 SF3A2Q15428 464 aaKnown RBP16.55■□□□□ 0.24
HMGXB4-206ENST00000466438 STPG1Q5TH74 334 aa16.55■□□□□ 0.24
HMGXB4-206ENST00000466438 HEATR3Q7Z4Q2 680 aa16.55■□□□□ 0.24
HMGXB4-206ENST00000466438 MRPL10Q7Z7H8 261 aaKnown RBP16.55■□□□□ 0.24
HMGXB4-206ENST00000466438 CMTR1Q8N1G2 835 aaKnown RBP16.55■□□□□ 0.24
HMGXB4-206ENST00000466438 FAM160A2Q8N612 972 aaPredicted RBP16.55■□□□□ 0.24
HMGXB4-206ENST00000466438 IGDCC4Q8TDY8 1250 aa16.55■□□□□ 0.24
HMGXB4-206ENST00000466438 DNASE1L2Q92874 299 aa16.55■□□□□ 0.24
HMGXB4-206ENST00000466438 FDXACB1Q9BRP7 624 aaPredicted RBP16.55■□□□□ 0.24
HMGXB4-206ENST00000466438 LSM14BQ9BX40 385 aaKnown RBP16.55■□□□□ 0.24
HMGXB4-206ENST00000466438 NRBP2Q9NSY0 501 aa16.55■□□□□ 0.24
HMGXB4-206ENST00000466438 FBXW11Q9UKB1 542 aa16.55■□□□□ 0.24
HMGXB4-206ENST00000466438 WDFY3Q8IZQ1 3526 aa16.54■□□□□ 0.24
HMGXB4-206ENST00000466438 CHURC1-FNTBB4DL54 471 aa16.54■□□□□ 0.24
HMGXB4-206ENST00000466438 ZNF862O60290 1169 aa16.54■□□□□ 0.24
HMGXB4-206ENST00000466438 HOXA9P31269 272 aa16.54■□□□□ 0.24
HMGXB4-206ENST00000466438 CXCL12P48061 93 aa16.54■□□□□ 0.24
HMGXB4-206ENST00000466438 FNTBP49356 437 aa16.54■□□□□ 0.24
HMGXB4-206ENST00000466438 SRSF5Q13243 272 aaKnown RBP16.54■□□□□ 0.24
HMGXB4-206ENST00000466438 LIN9Q5TKA1 542 aa16.54■□□□□ 0.24
HMGXB4-206ENST00000466438 PSAPL1Q6NUJ1 521 aa16.54■□□□□ 0.24
HMGXB4-206ENST00000466438 CATSPER4Q7RTX7 472 aa16.54■□□□□ 0.24
HMGXB4-206ENST00000466438 ZNF410Q86VK4 478 aa16.54■□□□□ 0.24
HMGXB4-206ENST00000466438 NPAS3Q8IXF0 933 aa16.54■□□□□ 0.24
HMGXB4-206ENST00000466438 NCOA7Q8NI08 942 aa16.54■□□□□ 0.24
HMGXB4-206ENST00000466438 ZNF577Q9BSK1 485 aa16.54■□□□□ 0.24
HMGXB4-206ENST00000466438 ADAM33Q9BZ11 813 aa16.54■□□□□ 0.24
HMGXB4-206ENST00000466438 RIC8AQ9NPQ8 531 aa16.54■□□□□ 0.24
HMGXB4-206ENST00000466438 NBEAQ8NFP9 2946 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms