RNA–Protein interactions for RNA: ENST00000466410.5

LIMS2-212, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-212ENST00000466410 MIF4GDA9UHW6 222 aaKnown RBP20.87■□□□□ 0.93
LIMS2-212ENST00000466410 SLC16A4O15374 487 aa20.87■□□□□ 0.93
LIMS2-212ENST00000466410 RTN2O75298 545 aa20.87■□□□□ 0.93
LIMS2-212ENST00000466410 ADRB2P07550 413 aa20.87■□□□□ 0.93
LIMS2-212ENST00000466410 COMTP21964 271 aa20.87■□□□□ 0.93
LIMS2-212ENST00000466410 QARSP47897 775 aaKnown RBP20.87■□□□□ 0.93
LIMS2-212ENST00000466410 MXI1P50539 228 aa20.87■□□□□ 0.93
LIMS2-212ENST00000466410 MRPS9P82933 396 aaKnown RBP20.87■□□□□ 0.93
LIMS2-212ENST00000466410 SPDYE2Q495Y8 402 aa20.87■□□□□ 0.93
LIMS2-212ENST00000466410 ZDHHC24Q6UX98 284 aa20.87■□□□□ 0.93
LIMS2-212ENST00000466410 CLEC4DQ8WXI8 215 aa20.87■□□□□ 0.93
LIMS2-212ENST00000466410 CYFIP2Q96F07 1278 aa20.87■□□□□ 0.93
LIMS2-212ENST00000466410 KREMEN1Q96MU8 473 aa20.87■□□□□ 0.93
LIMS2-212ENST00000466410 EFCC1Q9HA90 598 aa20.87■□□□□ 0.93
LIMS2-212ENST00000466410 NOCTQ9UK39 431 aaKnown RBP20.87■□□□□ 0.93
LIMS2-212ENST00000466410 PFASO15067 1338 aa20.87■□□□□ 0.93
LIMS2-212ENST00000466410 GMNCA6NCL1 334 aa20.87■□□□□ 0.93
LIMS2-212ENST00000466410 TRAPPC3O43617 180 aa20.87■□□□□ 0.93
LIMS2-212ENST00000466410 SHBGP04278 402 aa20.87■□□□□ 0.93
LIMS2-212ENST00000466410 PTGIRP43119 386 aa20.87■□□□□ 0.93
LIMS2-212ENST00000466410 PEX3P56589 373 aa20.87■□□□□ 0.93
LIMS2-212ENST00000466410 TNIP1Q15025 636 aa20.87■□□□□ 0.93
LIMS2-212ENST00000466410 UGCGQ16739 394 aa20.87■□□□□ 0.93
LIMS2-212ENST00000466410 MICALCLQ6ZW33 695 aa20.87■□□□□ 0.93
LIMS2-212ENST00000466410 CPNE8Q86YQ8 564 aa20.87■□□□□ 0.93
LIMS2-212ENST00000466410 UBL4BQ8N7F7 174 aa20.87■□□□□ 0.93
LIMS2-212ENST00000466410 FBXO25Q8TCJ0 367 aa20.87■□□□□ 0.93
LIMS2-212ENST00000466410 TMEM174Q8WUU8 243 aa20.87■□□□□ 0.93
LIMS2-212ENST00000466410 RGS17Q9UGC6 210 aaPredicted RBP20.87■□□□□ 0.93
LIMS2-212ENST00000466410 SYNGAP1Q96PV0 1343 aa20.86■□□□□ 0.93
LIMS2-212ENST00000466410 CYP26A1O43174 497 aa20.86■□□□□ 0.93
LIMS2-212ENST00000466410 PHF2O75151 1096 aa20.86■□□□□ 0.93
LIMS2-212ENST00000466410 PEX5P50542 639 aa20.86■□□□□ 0.93
LIMS2-212ENST00000466410 GTF2BQ00403 316 aa20.86■□□□□ 0.93
LIMS2-212ENST00000466410 TCEAL1Q15170 157 aa20.86■□□□□ 0.93
LIMS2-212ENST00000466410 FBXW10Q5XX13 1052 aa20.86■□□□□ 0.93
LIMS2-212ENST00000466410 FAM71AQ8IYT1 594 aa20.86■□□□□ 0.93
LIMS2-212ENST00000466410 BACH1O14867 736 aa20.86■□□□□ 0.93
LIMS2-212ENST00000466410 YWHABP31946 246 aaKnown RBP20.86■□□□□ 0.93
LIMS2-212ENST00000466410 MAP2K1Q02750 393 aaPredicted RBP20.86■□□□□ 0.93
LIMS2-212ENST00000466410 TTC27Q6P3X3 843 aa20.86■□□□□ 0.93
LIMS2-212ENST00000466410 SLC47A2Q86VL8 602 aa20.86■□□□□ 0.93
LIMS2-212ENST00000466410 CPXCR1Q8N123 301 aa20.86■□□□□ 0.93
LIMS2-212ENST00000466410 PPM1KQ8N3J5 372 aa20.86■□□□□ 0.93
LIMS2-212ENST00000466410 SUPT20HQ8NEM7 779 aa20.86■□□□□ 0.93
LIMS2-212ENST00000466410 VTI1AQ96AJ9 217 aa20.86■□□□□ 0.93
LIMS2-212ENST00000466410 GMLQ99445 158 aa20.86■□□□□ 0.93
LIMS2-212ENST00000466410 UBIAD1Q9Y5Z9 338 aa20.86■□□□□ 0.93
LIMS2-212ENST00000466410 CAND2O75155 1236 aa20.85■□□□□ 0.93
LIMS2-212ENST00000466410 IFT88Q13099 833 aa20.85■□□□□ 0.93
LIMS2-212ENST00000466410 CLUL1Q15846 466 aa20.85■□□□□ 0.93
LIMS2-212ENST00000466410 CBWD2Q8IUF1 395 aa20.85■□□□□ 0.93
LIMS2-212ENST00000466410 SEMA4DQ92854 862 aa20.85■□□□□ 0.93
LIMS2-212ENST00000466410 BTBD6Q96KE9 485 aa20.85■□□□□ 0.93
LIMS2-212ENST00000466410 PSMD1Q99460 953 aa20.85■□□□□ 0.93
LIMS2-212ENST00000466410 GRHL1Q9NZI5 618 aa20.85■□□□□ 0.93
LIMS2-212ENST00000466410 PYGMP11217 842 aa20.85■□□□□ 0.93
LIMS2-212ENST00000466410 PMS2P54278 862 aa20.85■□□□□ 0.93
LIMS2-212ENST00000466410 EIF3BP55884 814 aaKnown RBP20.85■□□□□ 0.93
LIMS2-212ENST00000466410 MTMR1Q13613 665 aa20.85■□□□□ 0.93
LIMS2-212ENST00000466410 QPCTQ16769 361 aa20.85■□□□□ 0.93
LIMS2-212ENST00000466410 SPDYCQ5MJ68 293 aa20.85■□□□□ 0.93
LIMS2-212ENST00000466410 OGFOD1Q8N543 542 aa20.85■□□□□ 0.93
LIMS2-212ENST00000466410 RAPGEF5Q92565 580 aa20.85■□□□□ 0.93
LIMS2-212ENST00000466410 RPS6KC1Q96S38 1066 aa20.85■□□□□ 0.93
LIMS2-212ENST00000466410 HOMER2Q9NSB8 354 aa20.85■□□□□ 0.93
LIMS2-212ENST00000466410 CAPN7Q9Y6W3 813 aa20.85■□□□□ 0.93
LIMS2-212ENST00000466410 ASTN2O75129 1339 aaPredicted RBP20.85■□□□□ 0.93
LIMS2-212ENST00000466410 TCRBV7S2A1N4TA0A589 114 aa20.84■□□□□ 0.93
LIMS2-212ENST00000466410 TBC1D12O60347 775 aa20.84■□□□□ 0.93
LIMS2-212ENST00000466410 MMEP08473 750 aa20.84■□□□□ 0.93
LIMS2-212ENST00000466410 DRG2P55039 364 aaKnown RBP20.84■□□□□ 0.93
LIMS2-212ENST00000466410 POTEAQ6S8J7 498 aa20.84■□□□□ 0.93
LIMS2-212ENST00000466410 NIPA1Q7RTP0 329 aa20.84■□□□□ 0.93
LIMS2-212ENST00000466410 YTHDF3Q7Z739 585 aaKnown RBP20.84■□□□□ 0.93
LIMS2-212ENST00000466410 RNF25Q96BH1 459 aaPredicted RBP20.84■□□□□ 0.93
LIMS2-212ENST00000466410 TLCD1Q96CP7 247 aa20.84■□□□□ 0.93
LIMS2-212ENST00000466410 ZNF341Q9BYN7 854 aa20.84■□□□□ 0.93
LIMS2-212ENST00000466410 PABPC3Q9H361 631 aaKnown RBP20.84■□□□□ 0.93
LIMS2-212ENST00000466410 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.84■□□□□ 0.93
LIMS2-212ENST00000466410 RASAL2Q9UJF2 1139 aa20.84■□□□□ 0.93
LIMS2-212ENST00000466410 TRPC6Q9Y210 931 aa20.84■□□□□ 0.93
LIMS2-212ENST00000466410 RGPD3A6NKT7 1758 aaPredicted RBP20.84■□□□□ 0.93
LIMS2-212ENST00000466410 RGPD4Q7Z3J3 1758 aa20.84■□□□□ 0.93
LIMS2-212ENST00000466410 ALAS1P13196 640 aa20.84■□□□□ 0.93
LIMS2-212ENST00000466410 CTNNA2P26232 953 aa20.84■□□□□ 0.93
LIMS2-212ENST00000466410 ADSSP30520 456 aa20.84■□□□□ 0.93
LIMS2-212ENST00000466410 CHRNA3P32297 505 aa20.84■□□□□ 0.93
LIMS2-212ENST00000466410 RPL21P46778 160 aaKnown RBP20.84■□□□□ 0.93
LIMS2-212ENST00000466410 FNTAP49354 379 aa20.84■□□□□ 0.93
LIMS2-212ENST00000466410 RASA3Q14644 834 aa20.84■□□□□ 0.93
LIMS2-212ENST00000466410 RNF187Q5TA31 235 aaPredicted RBP20.84■□□□□ 0.93
LIMS2-212ENST00000466410 MDM1Q8TC05 714 aa20.84■□□□□ 0.93
LIMS2-212ENST00000466410 CD101Q93033 1021 aa20.84■□□□□ 0.93
LIMS2-212ENST00000466410 CCDC127Q96BQ5 260 aa20.84■□□□□ 0.93
LIMS2-212ENST00000466410 ANKRD63C9JTQ0 380 aa20.83■□□□□ 0.93
LIMS2-212ENST00000466410 LYPLA2O95372 231 aa20.83■□□□□ 0.93
LIMS2-212ENST00000466410 FMO1Q01740 532 aa20.83■□□□□ 0.93
LIMS2-212ENST00000466410 UBAP2Q5T6F2 1119 aaKnown RBP20.83■□□□□ 0.93
LIMS2-212ENST00000466410 PCNX4Q63HM2 1172 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms