RNA–Protein interactions for RNA: ENST00000466373.1

UFD1-206, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 3,059 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-206ENST00000466373 DCDC2CA8MYV0 355 aa11.23□□□□□ -0.61
UFD1-206ENST00000466373 H0YGN5 161 aa11.23□□□□□ -0.61
UFD1-206ENST00000466373 CHRNB2P17787 502 aa11.23□□□□□ -0.61
UFD1-206ENST00000466373 COMTP21964 271 aa11.23□□□□□ -0.61
UFD1-206ENST00000466373 LSP1P33241 339 aa11.23□□□□□ -0.61
UFD1-206ENST00000466373 NPTX2P47972 431 aa11.23□□□□□ -0.61
UFD1-206ENST00000466373 PSMC5P62195 406 aa11.23□□□□□ -0.61
UFD1-206ENST00000466373 KDM7AQ6ZMT4 941 aa11.23□□□□□ -0.61
UFD1-206ENST00000466373 SAMD7Q7Z3H4 446 aa11.23□□□□□ -0.61
UFD1-206ENST00000466373 PHLDB2Q86SQ0 1253 aa11.23□□□□□ -0.61
UFD1-206ENST00000466373 CD302Q8IX05 232 aa11.23□□□□□ -0.61
UFD1-206ENST00000466373 AGBL3Q8NEM8 1001 aa11.23□□□□□ -0.61
UFD1-206ENST00000466373 EPS8L1Q8TE68 723 aa11.23□□□□□ -0.61
UFD1-206ENST00000466373 BSNDQ8WZ55 320 aa11.23□□□□□ -0.61
UFD1-206ENST00000466373 ATG4CQ96DT6 458 aa11.23□□□□□ -0.61
UFD1-206ENST00000466373 PI4K2AQ9BTU6 479 aa11.23□□□□□ -0.61
UFD1-206ENST00000466373 DEFB129Q9H1M3 183 aa11.23□□□□□ -0.61
UFD1-206ENST00000466373 CARD9Q9H257 536 aa11.23□□□□□ -0.61
UFD1-206ENST00000466373 TMBIM4Q9HC24 238 aa11.23□□□□□ -0.61
UFD1-206ENST00000466373 SNX24Q9Y343 169 aa11.23□□□□□ -0.61
UFD1-206ENST00000466373 NFS1Q9Y697 457 aa11.23□□□□□ -0.61
UFD1-206ENST00000466373 GOLGA6L10A0A0M3HER8 536 aa11.22□□□□□ -0.61
UFD1-206ENST00000466373 MYO1FO00160 1098 aa11.22□□□□□ -0.61
UFD1-206ENST00000466373 PLTPP55058 493 aa11.22□□□□□ -0.61
UFD1-206ENST00000466373 GPC5P78333 572 aa11.22□□□□□ -0.61
UFD1-206ENST00000466373 POU5F1Q01860 360 aaKnown RBP11.22□□□□□ -0.61
UFD1-206ENST00000466373 TMC3Q7Z5M5 1100 aa11.22□□□□□ -0.61
UFD1-206ENST00000466373 TMEM161BQ8NDZ6 487 aa11.22□□□□□ -0.61
UFD1-206ENST00000466373 TAS1R2Q8TE23 839 aa11.22□□□□□ -0.61
UFD1-206ENST00000466373 CEP170P1Q96L14 293 aa11.22□□□□□ -0.61
UFD1-206ENST00000466373 PPANQ9NQ55 473 aaKnown RBP11.22□□□□□ -0.61
UFD1-206ENST00000466373 PXMP2Q9NR77 195 aa11.22□□□□□ -0.61
UFD1-206ENST00000466373 TBX20Q9UMR3 447 aa11.22□□□□□ -0.61
UFD1-206ENST00000466373 WDR64B1ANS9 1081 aa11.22□□□□□ -0.61
UFD1-206ENST00000466373 CORO7P57737 925 aa11.22□□□□□ -0.61
UFD1-206ENST00000466373 PTENP60484 403 aa11.22□□□□□ -0.61
UFD1-206ENST00000466373 DMP1Q13316 513 aaPredicted RBP11.22□□□□□ -0.61
UFD1-206ENST00000466373 MYBPC2Q14324 1141 aa11.22□□□□□ -0.61
UFD1-206ENST00000466373 LMBRD2Q68DH5 695 aaPredicted RBP11.22□□□□□ -0.61
UFD1-206ENST00000466373 RHOT2Q8IXI1 618 aa11.22□□□□□ -0.61
UFD1-206ENST00000466373 ATP8B4Q8TF62 1192 aa11.22□□□□□ -0.61
UFD1-206ENST00000466373 LPAR1Q92633 364 aa11.22□□□□□ -0.61
UFD1-206ENST00000466373 TEPSINQ96N21 525 aa11.22□□□□□ -0.61
UFD1-206ENST00000466373 FMO2Q99518 471 aa11.22□□□□□ -0.61
UFD1-206ENST00000466373 PPP1R1BQ9UD71 204 aaPredicted RBP11.22□□□□□ -0.61
UFD1-206ENST00000466373 PTPN22Q9Y2R2 807 aa11.22□□□□□ -0.61
UFD1-206ENST00000466373 PSME4Q14997 1843 aa11.22□□□□□ -0.61
UFD1-206ENST00000466373 TCRBV7S2A1N4TA0A589 114 aa11.22□□□□□ -0.61
UFD1-206ENST00000466373 HMGB1P1B2RPK0 211 aaPredicted RBP11.22□□□□□ -0.61
UFD1-206ENST00000466373 RFX1P22670 979 aa11.22□□□□□ -0.61
UFD1-206ENST00000466373 TMOD1P28289 359 aa11.22□□□□□ -0.61
UFD1-206ENST00000466373 ALCAMQ13740 583 aa11.22□□□□□ -0.61
UFD1-206ENST00000466373 CIAPIN1Q6FI81 312 aa11.22□□□□□ -0.61
UFD1-206ENST00000466373 NIPA1Q7RTP0 329 aa11.22□□□□□ -0.61
UFD1-206ENST00000466373 C4orf19Q8IY42 314 aa11.22□□□□□ -0.61
UFD1-206ENST00000466373 ZDHHC14Q8IZN3 488 aa11.22□□□□□ -0.61
UFD1-206ENST00000466373 POMGNT1Q8WZA1 660 aa11.22□□□□□ -0.61
UFD1-206ENST00000466373 ZKSCAN4Q969J2 545 aaPredicted RBP11.22□□□□□ -0.61
UFD1-206ENST00000466373 KIAA1683Q9H0B3 1180 aa11.22□□□□□ -0.61
UFD1-206ENST00000466373 KMT5AQ9NQR1 393 aa11.22□□□□□ -0.61
UFD1-206ENST00000466373 GABBR1Q9UBS5 961 aa11.22□□□□□ -0.61
UFD1-206ENST00000466373 NOCTQ9UK39 431 aaKnown RBP11.22□□□□□ -0.61
UFD1-206ENST00000466373 DAAM1Q9Y4D1 1078 aa11.22□□□□□ -0.61
UFD1-206ENST00000466373 FAM169AQ9Y6X4 670 aa11.22□□□□□ -0.61
UFD1-206ENST00000466373 ATP8B3O60423 1300 aa11.22□□□□□ -0.61
UFD1-206ENST00000466373 KRT5P13647 590 aa11.21□□□□□ -0.61
UFD1-206ENST00000466373 SMTNP53814 917 aa11.21□□□□□ -0.61
UFD1-206ENST00000466373 NCKAP1LP55160 1127 aa11.21□□□□□ -0.61
UFD1-206ENST00000466373 KRT71Q3SY84 523 aa11.21□□□□□ -0.61
UFD1-206ENST00000466373 C2CD6Q53TS8 623 aa11.21□□□□□ -0.61
UFD1-206ENST00000466373 FMNL3Q8IVF7 1028 aa11.21□□□□□ -0.61
UFD1-206ENST00000466373 FAM71AQ8IYT1 594 aa11.21□□□□□ -0.61
UFD1-206ENST00000466373 UHMK1Q8TAS1 419 aaKnown RBP11.21□□□□□ -0.61
UFD1-206ENST00000466373 TATDN2Q93075 761 aa11.21□□□□□ -0.61
UFD1-206ENST00000466373 NUP85Q9BW27 656 aa11.21□□□□□ -0.61
UFD1-206ENST00000466373 RNF146Q9NTX7 359 aa11.21□□□□□ -0.61
UFD1-206ENST00000466373 TTC7AQ9ULT0 858 aaPredicted RBP11.21□□□□□ -0.61
UFD1-206ENST00000466373 NOVA2Q9UNW9 492 aaKnown RBP11.21□□□□□ -0.61
UFD1-206ENST00000466373 TRPC6Q9Y210 931 aa11.21□□□□□ -0.61
UFD1-206ENST00000466373 LOXHD1Q8IVV2 1947 aa11.21□□□□□ -0.61
UFD1-206ENST00000466373 SMIM23A6NLE4 172 aa11.21□□□□□ -0.62
UFD1-206ENST00000466373 HNRNPDLO14979 420 aaKnown RBP11.21□□□□□ -0.62
UFD1-206ENST00000466373 SPOPO43791 374 aa11.21□□□□□ -0.62
UFD1-206ENST00000466373 ZNF862O60290 1169 aa11.21□□□□□ -0.62
UFD1-206ENST00000466373 ZBED4O75132 1171 aa11.21□□□□□ -0.62
UFD1-206ENST00000466373 RTN2O75298 545 aa11.21□□□□□ -0.62
UFD1-206ENST00000466373 MAPTP10636 758 aaKnown RBP11.21□□□□□ -0.62
UFD1-206ENST00000466373 PYGMP11217 842 aa11.21□□□□□ -0.62
UFD1-206ENST00000466373 MDH1P40925 334 aaKnown RBP11.21□□□□□ -0.62
UFD1-206ENST00000466373 FMO1Q01740 532 aa11.21□□□□□ -0.62
UFD1-206ENST00000466373 MAP3K10Q02779 954 aa11.21□□□□□ -0.62
UFD1-206ENST00000466373 IFFO1Q0D2I5 559 aa11.21□□□□□ -0.62
UFD1-206ENST00000466373 NBPF12Q5TAG4 269 aaPredicted RBP11.21□□□□□ -0.62
UFD1-206ENST00000466373 KRT39Q6A163 491 aa11.21□□□□□ -0.62
UFD1-206ENST00000466373 NLRX1Q86UT6 975 aa11.21□□□□□ -0.62
UFD1-206ENST00000466373 ADGRA3Q8IWK6 1321 aa11.21□□□□□ -0.62
UFD1-206ENST00000466373 UBL4BQ8N7F7 174 aa11.21□□□□□ -0.62
UFD1-206ENST00000466373 MTMR14Q8NCE2 650 aa11.21□□□□□ -0.62
UFD1-206ENST00000466373 PARD3BQ8TEW8 1205 aa11.21□□□□□ -0.62
UFD1-206ENST00000466373 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms