RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 NTN5Q8WTR8 489 aaPredicted RBP5.85□□□□□ -1.47
LRCH3-211ENST00000466054 MLST8Q9BVC4 326 aa5.85□□□□□ -1.47
LRCH3-211ENST00000466054 CYP4F11Q9HBI6 524 aa5.85□□□□□ -1.47
LRCH3-211ENST00000466054 WASHC2CQ9Y4E1 1318 aa5.84□□□□□ -1.47
LRCH3-211ENST00000466054 GOLGA6L6A8MZA4 724 aa5.84□□□□□ -1.47
LRCH3-211ENST00000466054 KIAA0355O15063 1070 aa5.84□□□□□ -1.47
LRCH3-211ENST00000466054 KDM1AO60341 852 aa5.84□□□□□ -1.47
LRCH3-211ENST00000466054 BCAR1P56945 870 aa5.84□□□□□ -1.47
LRCH3-211ENST00000466054 ATP2C1P98194 919 aaPredicted RBP5.84□□□□□ -1.47
LRCH3-211ENST00000466054 MAP3K12Q12852 859 aa5.84□□□□□ -1.47
LRCH3-211ENST00000466054 ADAM15Q13444 863 aa5.84□□□□□ -1.47
LRCH3-211ENST00000466054 HECTD2Q5U5R9 776 aa5.84□□□□□ -1.47
LRCH3-211ENST00000466054 PRAMEF9Q5VWM5 478 aa5.84□□□□□ -1.47
LRCH3-211ENST00000466054 KANK2Q63ZY3 851 aa5.84□□□□□ -1.47
LRCH3-211ENST00000466054 KIAA1841Q6NSI8 718 aa5.84□□□□□ -1.47
LRCH3-211ENST00000466054 LRSAM1Q6UWE0 723 aa5.84□□□□□ -1.47
LRCH3-211ENST00000466054 CNTD1Q8N815 330 aa5.84□□□□□ -1.47
LRCH3-211ENST00000466054 RPGRQ92834 1020 aaKnown RBP5.84□□□□□ -1.47
LRCH3-211ENST00000466054 LPPQ93052 612 aa5.84□□□□□ -1.47
LRCH3-211ENST00000466054 PGBD4Q96DM1 585 aa5.84□□□□□ -1.47
LRCH3-211ENST00000466054 AHCYL2Q96HN2 611 aaKnown RBP5.84□□□□□ -1.47
LRCH3-211ENST00000466054 ZNF496Q96IT1 587 aaPredicted RBP5.84□□□□□ -1.47
LRCH3-211ENST00000466054 ACAP3Q96P50 834 aa5.84□□□□□ -1.47
LRCH3-211ENST00000466054 DDX56Q9NY93 547 aaKnown RBP5.84□□□□□ -1.47
LRCH3-211ENST00000466054 PRPF6O94906 941 aaKnown RBP5.83□□□□□ -1.48
LRCH3-211ENST00000466054 ITGB1P05556 798 aa5.83□□□□□ -1.48
LRCH3-211ENST00000466054 EVA1CP58658 441 aa5.83□□□□□ -1.48
LRCH3-211ENST00000466054 EXOSC10Q01780 885 aaKnown RBP5.83□□□□□ -1.48
LRCH3-211ENST00000466054 ADCY2Q08462 1091 aa5.83□□□□□ -1.48
LRCH3-211ENST00000466054 FAM50AQ14320 339 aaKnown RBP5.83□□□□□ -1.48
LRCH3-211ENST00000466054 MYBPC3Q14896 1274 aa5.83□□□□□ -1.48
LRCH3-211ENST00000466054 RD3Q7Z3Z2 195 aa5.83□□□□□ -1.48
LRCH3-211ENST00000466054 CXorf67Q86X51 503 aaPredicted RBP5.83□□□□□ -1.48
LRCH3-211ENST00000466054 COG1Q8WTW3 980 aa5.83□□□□□ -1.48
LRCH3-211ENST00000466054 GCDHQ92947 438 aaPredicted RBP5.83□□□□□ -1.48
LRCH3-211ENST00000466054 FAM193BQ96PV7 902 aaPredicted RBP5.83□□□□□ -1.48
LRCH3-211ENST00000466054 POFUT1Q9H488 388 aa5.83□□□□□ -1.48
LRCH3-211ENST00000466054 FZD1Q9UP38 647 aa5.83□□□□□ -1.48
LRCH3-211ENST00000466054 XDHP47989 1333 aa5.82□□□□□ -1.48
LRCH3-211ENST00000466054 WASHC2AQ641Q2 1341 aa5.82□□□□□ -1.48
LRCH3-211ENST00000466054 ST20-MTHFSA0A0A6YYL1 179 aa5.82□□□□□ -1.48
LRCH3-211ENST00000466054 PPM1GO15355 546 aaPredicted RBP5.82□□□□□ -1.48
LRCH3-211ENST00000466054 PDGFRBP09619 1106 aa5.82□□□□□ -1.48
LRCH3-211ENST00000466054 RGS3P49796 1198 aa5.82□□□□□ -1.48
LRCH3-211ENST00000466054 MANFP55145 182 aaKnown RBP5.82□□□□□ -1.48
LRCH3-211ENST00000466054 ERVK-21P61565 698 aa5.82□□□□□ -1.48
LRCH3-211ENST00000466054 MTMR1Q13613 665 aa5.82□□□□□ -1.48
LRCH3-211ENST00000466054 SAFB2Q14151 953 aaKnown RBP eCLIP5.82□□□□□ -1.48
LRCH3-211ENST00000466054 BRDTQ58F21 947 aaPredicted RBP5.82□□□□□ -1.48
LRCH3-211ENST00000466054 FAM111BQ6SJ93 734 aa5.82□□□□□ -1.48
LRCH3-211ENST00000466054 OLFML1Q6UWY5 402 aa5.82□□□□□ -1.48
LRCH3-211ENST00000466054 LMBR1Q8WVP7 490 aa5.82□□□□□ -1.48
LRCH3-211ENST00000466054 ATXN2LQ8WWM7 1075 aaKnown RBP5.82□□□□□ -1.48
LRCH3-211ENST00000466054 FERMT2Q96AC1 680 aa5.82□□□□□ -1.48
LRCH3-211ENST00000466054 RPL10LQ96L21 214 aaKnown RBP5.82□□□□□ -1.48
LRCH3-211ENST00000466054 MYL10Q9BUA6 226 aa5.82□□□□□ -1.48
LRCH3-211ENST00000466054 MS4A5Q9H3V2 200 aa5.82□□□□□ -1.48
LRCH3-211ENST00000466054 TOR3AQ9H497 397 aa5.82□□□□□ -1.48
LRCH3-211ENST00000466054 TOPORSQ9NS56 1045 aaPredicted RBP5.82□□□□□ -1.48
LRCH3-211ENST00000466054 KCMF1Q9P0J7 381 aa5.82□□□□□ -1.48
LRCH3-211ENST00000466054 SPEF1Q9Y4P9 236 aa5.82□□□□□ -1.48
LRCH3-211ENST00000466054 SPATA31A6Q5VVP1 1343 aa5.81□□□□□ -1.48
LRCH3-211ENST00000466054 INO80B-WBP1J3KQ70 363 aa5.81□□□□□ -1.48
LRCH3-211ENST00000466054 ELL2O00472 640 aaPredicted RBP5.81□□□□□ -1.48
LRCH3-211ENST00000466054 H2AFYO75367 372 aaKnown RBP5.81□□□□□ -1.48
LRCH3-211ENST00000466054 SESN2P58004 480 aaPredicted RBP5.81□□□□□ -1.48
LRCH3-211ENST00000466054 ITKQ08881 620 aa5.81□□□□□ -1.48
LRCH3-211ENST00000466054 KLF1Q13351 362 aaPredicted RBP5.81□□□□□ -1.48
LRCH3-211ENST00000466054 TIGD2Q4W5G0 525 aa5.81□□□□□ -1.48
LRCH3-211ENST00000466054 SYDE2Q5VT97 1194 aa5.81□□□□□ -1.48
LRCH3-211ENST00000466054 PAPD7Q5XG87 772 aaKnown RBP5.81□□□□□ -1.48
LRCH3-211ENST00000466054 LRRC55Q6ZSA7 311 aa5.81□□□□□ -1.48
LRCH3-211ENST00000466054 MB21D1Q8N884 522 aa5.81□□□□□ -1.48
LRCH3-211ENST00000466054 STAG1Q8WVM7 1258 aa5.81□□□□□ -1.48
LRCH3-211ENST00000466054 RSAD2Q8WXG1 361 aa5.81□□□□□ -1.48
LRCH3-211ENST00000466054 SLC7A6OSQ96CW6 309 aaPredicted RBP5.81□□□□□ -1.48
LRCH3-211ENST00000466054 ORAI2Q96SN7 254 aa5.81□□□□□ -1.48
LRCH3-211ENST00000466054 INO80BQ9C086 356 aaPredicted RBP5.81□□□□□ -1.48
LRCH3-211ENST00000466054 PITHD1Q9GZP4 211 aaPredicted RBP5.81□□□□□ -1.48
LRCH3-211ENST00000466054 SLC6A15Q9H2J7 730 aa5.81□□□□□ -1.48
LRCH3-211ENST00000466054 RSAD1Q9HA92 442 aa5.81□□□□□ -1.48
LRCH3-211ENST00000466054 VTA1Q9NP79 307 aa5.81□□□□□ -1.48
LRCH3-211ENST00000466054 C14orf119Q9NWQ9 140 aa5.81□□□□□ -1.48
LRCH3-211ENST00000466054 RCAN3Q9UKA8 241 aa5.81□□□□□ -1.48
LRCH3-211ENST00000466054 DENND2AQ9ULE3 1009 aa5.81□□□□□ -1.48
LRCH3-211ENST00000466054 VWA7Q9Y334 891 aa5.81□□□□□ -1.48
LRCH3-211ENST00000466054 NUMBLQ9Y6R0 609 aa5.81□□□□□ -1.48
LRCH3-211ENST00000466054 GOLGA8AA7E2F4 631 aa5.8□□□□□ -1.48
LRCH3-211ENST00000466054 MFAP3LO75121 409 aa5.8□□□□□ -1.48
LRCH3-211ENST00000466054 KATNA1O75449 491 aa5.8□□□□□ -1.48
LRCH3-211ENST00000466054 APOL3O95236 402 aa5.8□□□□□ -1.48
LRCH3-211ENST00000466054 PDCD1Q15116 288 aa5.8□□□□□ -1.48
LRCH3-211ENST00000466054 FSCN1Q16658 493 aaKnown RBP5.8□□□□□ -1.48
LRCH3-211ENST00000466054 COLEC12Q5KU26 742 aa5.8□□□□□ -1.48
LRCH3-211ENST00000466054 ZBTB41Q5SVQ8 909 aa5.8□□□□□ -1.48
LRCH3-211ENST00000466054 KLHDC10Q6PID8 442 aa5.8□□□□□ -1.48
LRCH3-211ENST00000466054 RHOUQ7L0Q8 258 aa5.8□□□□□ -1.48
LRCH3-211ENST00000466054 BMP8AQ7Z5Y6 402 aa5.8□□□□□ -1.48
LRCH3-211ENST00000466054 SUPT20HQ8NEM7 779 aa5.8□□□□□ -1.48
LRCH3-211ENST00000466054 MTMR8Q96EF0 704 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms