RNA–Protein interactions for RNA: ENST00000465903.5

SMC4-206, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-206ENST00000465903 PPM1EQ8WY54 764 aa28.55■■■□□ 2.16
SMC4-206ENST00000465903 C11orf84Q9BUA3 381 aaPredicted RBP28.55■■■□□ 2.16
SMC4-206ENST00000465903 PLAGL2Q9UPG8 496 aa28.55■■■□□ 2.16
SMC4-206ENST00000465903 HES2Q9Y543 173 aa28.55■■■□□ 2.16
SMC4-206ENST00000465903 GRM6O15303 877 aa28.54■■■□□ 2.16
SMC4-206ENST00000465903 ITGA4P13612 1032 aa28.54■■■□□ 2.16
SMC4-206ENST00000465903 AFF1P51825 1210 aaKnown RBP28.54■■■□□ 2.16
SMC4-206ENST00000465903 ZNF131P52739 623 aa28.54■■■□□ 2.16
SMC4-206ENST00000465903 SPOUT1Q5T280 376 aaKnown RBP28.54■■■□□ 2.16
SMC4-206ENST00000465903 EEF1DP3Q658K8 133 aa28.54■■■□□ 2.16
SMC4-206ENST00000465903 CCDC73Q6ZRK6 1079 aa28.54■■■□□ 2.16
SMC4-206ENST00000465903 COLGALT1Q8NBJ5 622 aa28.54■■■□□ 2.16
SMC4-206ENST00000465903 RSAD1Q9HA92 442 aa28.54■■■□□ 2.16
SMC4-206ENST00000465903 RBM19Q9Y4C8 960 aaKnown RBP28.54■■■□□ 2.16
SMC4-206ENST00000465903 PHLPP2Q6ZVD8 1323 aa28.53■■■□□ 2.16
SMC4-206ENST00000465903 N4BP3O15049 544 aa28.53■■■□□ 2.16
SMC4-206ENST00000465903 ITGB1P05556 798 aa28.53■■■□□ 2.16
SMC4-206ENST00000465903 NOMO2Q5JPE7 1267 aa28.53■■■□□ 2.16
SMC4-206ENST00000465903 GLB1LQ6UWU2 654 aa28.53■■■□□ 2.16
SMC4-206ENST00000465903 MICALL1Q8N3F8 863 aa28.53■■■□□ 2.16
SMC4-206ENST00000465903 PDILTQ8N807 584 aa28.53■■■□□ 2.16
SMC4-206ENST00000465903 TMEM161BQ8NDZ6 487 aa28.53■■■□□ 2.16
SMC4-206ENST00000465903 SPPL3Q8TCT6 385 aa28.53■■■□□ 2.16
SMC4-206ENST00000465903 MRPL38Q96DV4 380 aaKnown RBP28.53■■■□□ 2.16
SMC4-206ENST00000465903 NXF3Q9H4D5 531 aaKnown RBP28.53■■■□□ 2.16
SMC4-206ENST00000465903 ALG13Q9NP73 1137 aaKnown RBP28.53■■■□□ 2.16
SMC4-206ENST00000465903 KCNG1Q9UIX4 513 aa28.53■■■□□ 2.16
SMC4-206ENST00000465903 CAMK1Q14012 370 aa28.52■■■□□ 2.16
SMC4-206ENST00000465903 RSPH1Q8WYR4 309 aa28.52■■■□□ 2.16
SMC4-206ENST00000465903 MRPL9Q9BYD2 267 aaKnown RBP28.52■■■□□ 2.16
SMC4-206ENST00000465903 AAASQ9NRG9 546 aa28.52■■■□□ 2.16
SMC4-206ENST00000465903 TBC1D13Q9NVG8 400 aa28.52■■■□□ 2.16
SMC4-206ENST00000465903 INPP5FQ9Y2H2 1132 aa28.52■■■□□ 2.16
SMC4-206ENST00000465903 PCDHB12Q9Y5F1 795 aa28.52■■■□□ 2.16
SMC4-206ENST00000465903 MYMKA6NI61 221 aa28.51■■■□□ 2.15
SMC4-206ENST00000465903 LAG3P18627 525 aa28.51■■■□□ 2.15
SMC4-206ENST00000465903 STAT6P42226 847 aa28.51■■■□□ 2.15
SMC4-206ENST00000465903 ME1P48163 572 aa28.51■■■□□ 2.15
SMC4-206ENST00000465903 NCKAP1LP55160 1127 aa28.51■■■□□ 2.15
SMC4-206ENST00000465903 E2F4Q16254 413 aa28.51■■■□□ 2.15
SMC4-206ENST00000465903 KCNT2Q6UVM3 1135 aa28.51■■■□□ 2.15
SMC4-206ENST00000465903 SV2BQ7L1I2 683 aa28.51■■■□□ 2.15
SMC4-206ENST00000465903 FIZ1Q96SL8 496 aa28.51■■■□□ 2.15
SMC4-206ENST00000465903 ACO2Q99798 780 aaKnown RBP28.51■■■□□ 2.15
SMC4-206ENST00000465903 TRIM6Q9C030 488 aaPredicted RBP28.51■■■□□ 2.15
SMC4-206ENST00000465903 NRDE2Q9H7Z3 1164 aa28.51■■■□□ 2.15
SMC4-206ENST00000465903 MIOSQ9NXC5 875 aa28.51■■■□□ 2.15
SMC4-206ENST00000465903 LARSQ9P2J5 1176 aaKnown RBP28.51■■■□□ 2.15
SMC4-206ENST00000465903 INPPL1O15357 1258 aa28.5■■■□□ 2.15
SMC4-206ENST00000465903 FAM13AO94988 1023 aa28.5■■■□□ 2.15
SMC4-206ENST00000465903 KRT18P05783 430 aaKnown RBP28.5■■■□□ 2.15
SMC4-206ENST00000465903 MAPTP10636 758 aaKnown RBP28.5■■■□□ 2.15
SMC4-206ENST00000465903 DNAJB1P25685 340 aa28.5■■■□□ 2.15
SMC4-206ENST00000465903 SMTNP53814 917 aa28.5■■■□□ 2.15
SMC4-206ENST00000465903 TMEM132AQ24JP5 1023 aa28.5■■■□□ 2.15
SMC4-206ENST00000465903 ATF7IP2Q5U623 682 aa28.5■■■□□ 2.15
SMC4-206ENST00000465903 DYMQ7RTS9 669 aa28.5■■■□□ 2.15
SMC4-206ENST00000465903 KCNN1Q92952 543 aa28.5■■■□□ 2.15
SMC4-206ENST00000465903 DNAJC19Q96DA6 116 aa28.5■■■□□ 2.15
SMC4-206ENST00000465903 APOL6Q9BWW8 343 aa28.5■■■□□ 2.15
SMC4-206ENST00000465903 LMAN2LQ9H0V9 348 aa28.5■■■□□ 2.15
SMC4-206ENST00000465903 PTPRHQ9HD43 1115 aa28.5■■■□□ 2.15
SMC4-206ENST00000465903 UBN1Q9NPG3 1134 aa28.5■■■□□ 2.15
SMC4-206ENST00000465903 TNFSF13BQ9Y275 285 aa28.5■■■□□ 2.15
SMC4-206ENST00000465903 B4GALT3O60512 393 aa28.49■■■□□ 2.15
SMC4-206ENST00000465903 AKAP5P24588 427 aa28.49■■■□□ 2.15
SMC4-206ENST00000465903 PBX3P40426 434 aa28.49■■■□□ 2.15
SMC4-206ENST00000465903 MYCT1Q8N699 235 aa28.49■■■□□ 2.15
SMC4-206ENST00000465903 LEO1Q8WVC0 666 aaPredicted RBP28.49■■■□□ 2.15
SMC4-206ENST00000465903 DDX12PQ92771 950 aa28.49■■■□□ 2.15
SMC4-206ENST00000465903 GAD1Q99259 594 aa28.49■■■□□ 2.15
SMC4-206ENST00000465903 TARS2Q9BW92 718 aaKnown RBP28.49■■■□□ 2.15
SMC4-206ENST00000465903 PARVGQ9HBI0 331 aa28.49■■■□□ 2.15
SMC4-206ENST00000465903 GIT1Q9Y2X7 761 aa28.49■■■□□ 2.15
SMC4-206ENST00000465903 BRWD1Q9NSI6 2320 aa28.49■■■□□ 2.15
SMC4-206ENST00000465903 KRT85P78386 507 aa28.48■■■□□ 2.15
SMC4-206ENST00000465903 PTPROQ16827 1216 aa28.48■■■□□ 2.15
SMC4-206ENST00000465903 RESP18Q5W5W9 173 aa28.48■■■□□ 2.15
SMC4-206ENST00000465903 HAUS6Q7Z4H7 955 aa28.48■■■□□ 2.15
SMC4-206ENST00000465903 ZNF280BQ86YH2 543 aa28.48■■■□□ 2.15
SMC4-206ENST00000465903 GSTCDQ8NEC7 633 aa28.48■■■□□ 2.15
SMC4-206ENST00000465903 ZNF558Q96NG5 402 aa28.48■■■□□ 2.15
SMC4-206ENST00000465903 MRPL4Q9BYD3 311 aaKnown RBP28.48■■■□□ 2.15
SMC4-206ENST00000465903 PRDM6Q9NQX0 595 aa28.48■■■□□ 2.15
SMC4-206ENST00000465903 CITO14578 2027 aa28.47■■■□□ 2.15
SMC4-206ENST00000465903 ARL5CA6NH57 179 aa28.47■■■□□ 2.15
SMC4-206ENST00000465903 TRAK2O60296 914 aa28.47■■■□□ 2.15
SMC4-206ENST00000465903 FGF18O76093 207 aa28.47■■■□□ 2.15
SMC4-206ENST00000465903 DDHD2O94830 711 aa28.47■■■□□ 2.15
SMC4-206ENST00000465903 POMCP01189 267 aa28.47■■■□□ 2.15
SMC4-206ENST00000465903 URGCPQ8TCY9 931 aa28.47■■■□□ 2.15
SMC4-206ENST00000465903 POF1BQ8WVV4 589 aa28.47■■■□□ 2.15
SMC4-206ENST00000465903 ZFP42Q96MM3 310 aa28.47■■■□□ 2.15
SMC4-206ENST00000465903 ADPGKQ9BRR6 497 aa28.47■■■□□ 2.15
SMC4-206ENST00000465903 ZHX3Q9H4I2 956 aa28.47■■■□□ 2.15
SMC4-206ENST00000465903 SNTG2Q9NY99 539 aa28.47■■■□□ 2.15
SMC4-206ENST00000465903 KANSL3Q9P2N6 904 aa28.47■■■□□ 2.15
SMC4-206ENST00000465903 DNAJB4Q9UDY4 337 aa28.47■■■□□ 2.15
SMC4-206ENST00000465903 ATP6V1DQ9Y5K8 247 aa28.47■■■□□ 2.15
SMC4-206ENST00000465903 ABLIM1O14639 778 aa28.46■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms