RNA–Protein interactions for RNA: ENST00000465871.1

SSB-207, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 421 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-207ENST00000465871 GYPEP15421 78 aa7.74□□□□□ -1.17
SSB-207ENST00000465871 BPIP17213 487 aa7.74□□□□□ -1.17
SSB-207ENST00000465871 MEF2AQ02078 507 aaPredicted RBP7.74□□□□□ -1.17
SSB-207ENST00000465871 TRIM25Q14258 630 aaKnown RBP7.74□□□□□ -1.17
SSB-207ENST00000465871 DHCR24Q15392 516 aa7.74□□□□□ -1.17
SSB-207ENST00000465871 SMN1Q16637 294 aaKnown RBP7.74□□□□□ -1.17
SSB-207ENST00000465871 PLEKHG4Q58EX7 1191 aa7.74□□□□□ -1.17
SSB-207ENST00000465871 TAF7LQ5H9L4 462 aa7.74□□□□□ -1.17
SSB-207ENST00000465871 PCSK4Q6UW60 755 aa7.74□□□□□ -1.17
SSB-207ENST00000465871 Q6ZPA2 131 aa7.74□□□□□ -1.17
SSB-207ENST00000465871 RHOUQ7L0Q8 258 aa7.74□□□□□ -1.17
SSB-207ENST00000465871 NOP9Q86U38 636 aaKnown RBP7.74□□□□□ -1.17
SSB-207ENST00000465871 SYNE4Q8N205 404 aa7.74□□□□□ -1.17
SSB-207ENST00000465871 LSM14BQ9BX40 385 aaKnown RBP7.74□□□□□ -1.17
SSB-207ENST00000465871 CPEB1Q9BZB8 566 aaKnown RBP7.74□□□□□ -1.17
SSB-207ENST00000465871 SORCS3Q9UPU3 1222 aa7.74□□□□□ -1.17
SSB-207ENST00000465871 NOC2LQ9Y3T9 749 aaKnown RBP7.74□□□□□ -1.17
SSB-207ENST00000465871 TBX22Q9Y458 520 aa7.74□□□□□ -1.17
SSB-207ENST00000465871 LTA4HP09960 611 aaKnown RBP7.73□□□□□ -1.17
SSB-207ENST00000465871 KRT4P19013 534 aa7.73□□□□□ -1.17
SSB-207ENST00000465871 UBE3CQ15386 1083 aa7.73□□□□□ -1.17
SSB-207ENST00000465871 PITRM1Q5JRX3 1037 aa7.73□□□□□ -1.17
SSB-207ENST00000465871 USP7Q93009 1102 aa7.73□□□□□ -1.17
SSB-207ENST00000465871 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.73□□□□□ -1.17
SSB-207ENST00000465871 CDY2AQ9Y6F7 541 aa7.73□□□□□ -1.17
SSB-207ENST00000465871 RAMP2O60895 175 aa7.72□□□□□ -1.17
SSB-207ENST00000465871 PPFIA4O75335 1185 aa7.72□□□□□ -1.17
SSB-207ENST00000465871 RECQL4O94761 1208 aa7.72□□□□□ -1.17
SSB-207ENST00000465871 NR4A1P22736 598 aa7.72□□□□□ -1.17
SSB-207ENST00000465871 VPS72Q15906 364 aa7.72□□□□□ -1.17
SSB-207ENST00000465871 RPUSD2Q8IZ73 545 aaKnown RBP7.72□□□□□ -1.17
SSB-207ENST00000465871 CPT1CQ8TCG5 803 aa7.72□□□□□ -1.17
SSB-207ENST00000465871 PRDM12Q9H4Q4 367 aa7.72□□□□□ -1.17
SSB-207ENST00000465871 FZD1Q9UP38 647 aa7.72□□□□□ -1.17
SSB-207ENST00000465871 HDAC5Q9UQL6 1122 aa7.72□□□□□ -1.17
SSB-207ENST00000465871 TMEM191CA6NGB0 347 aa7.71□□□□□ -1.18
SSB-207ENST00000465871 PRAMEF4O60810 478 aa7.71□□□□□ -1.18
SSB-207ENST00000465871 TMEM127O75204 238 aa7.71□□□□□ -1.18
SSB-207ENST00000465871 SCAF4O95104 1147 aaKnown RBP7.71□□□□□ -1.18
SSB-207ENST00000465871 LRRC55Q6ZSA7 311 aa7.71□□□□□ -1.18
SSB-207ENST00000465871 RNF180Q86T96 592 aa7.71□□□□□ -1.18
SSB-207ENST00000465871 KCTD10Q9H3F6 313 aa7.71□□□□□ -1.18
SSB-207ENST00000465871 IFT22Q9H7X7 185 aa7.71□□□□□ -1.18
SSB-207ENST00000465871 DMRT1Q9Y5R6 373 aa7.71□□□□□ -1.18
SSB-207ENST00000465871 FOXN1O15353 648 aa7.7□□□□□ -1.18
SSB-207ENST00000465871 ITGB1P05556 798 aa7.7□□□□□ -1.18
SSB-207ENST00000465871 C19orf54Q5BKX5 351 aa7.7□□□□□ -1.18
SSB-207ENST00000465871 THNSL2Q86YJ6 484 aa7.7□□□□□ -1.18
SSB-207ENST00000465871 AGAP2Q99490 1192 aa7.7□□□□□ -1.18
SSB-207ENST00000465871 TTPALQ9BTX7 342 aa7.7□□□□□ -1.18
SSB-207ENST00000465871 KCNH6Q9H252 994 aa7.7□□□□□ -1.18
SSB-207ENST00000465871 EIF2B4Q9UI10 523 aaKnown RBP7.7□□□□□ -1.18
SSB-207ENST00000465871 CLCA2Q9UQC9 943 aa7.7□□□□□ -1.18
SSB-207ENST00000465871 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.69□□□□□ -1.18
SSB-207ENST00000465871 NEMP1O14524 444 aa7.69□□□□□ -1.18
SSB-207ENST00000465871 ZEB2O60315 1214 aa7.69□□□□□ -1.18
SSB-207ENST00000465871 ULK1O75385 1050 aa7.69□□□□□ -1.18
SSB-207ENST00000465871 LPLP06858 475 aa7.69□□□□□ -1.18
SSB-207ENST00000465871 GYS2P54840 703 aa7.69□□□□□ -1.18
SSB-207ENST00000465871 LGALS4P56470 323 aa7.69□□□□□ -1.18
SSB-207ENST00000465871 SESN3P58005 492 aa7.69□□□□□ -1.18
SSB-207ENST00000465871 PDCD1Q15116 288 aa7.69□□□□□ -1.18
SSB-207ENST00000465871 CT83Q5H943 113 aa7.69□□□□□ -1.18
SSB-207ENST00000465871 IQSEC1Q6DN90 963 aa7.69□□□□□ -1.18
SSB-207ENST00000465871 XYLT1Q86Y38 959 aa7.69□□□□□ -1.18
SSB-207ENST00000465871 SNX33Q8WV41 574 aa7.69□□□□□ -1.18
SSB-207ENST00000465871 FAM193BQ96PV7 902 aaPredicted RBP7.69□□□□□ -1.18
SSB-207ENST00000465871 CDC5LQ99459 802 aaKnown RBP7.69□□□□□ -1.18
SSB-207ENST00000465871 TTC1Q99614 292 aa7.69□□□□□ -1.18
SSB-207ENST00000465871 NDC1Q9BTX1 674 aa7.69□□□□□ -1.18
SSB-207ENST00000465871 MLST8Q9BVC4 326 aa7.69□□□□□ -1.18
SSB-207ENST00000465871 APOBEC2Q9Y235 224 aaKnown RBP7.69□□□□□ -1.18
SSB-207ENST00000465871 PRR5-ARHGAP8B1AHC4 643 aa7.68□□□□□ -1.18
SSB-207ENST00000465871 ABHD16AO95870 558 aa7.68□□□□□ -1.18
SSB-207ENST00000465871 HSP90B1P14625 803 aaKnown RBP7.68□□□□□ -1.18
SSB-207ENST00000465871 APBA1Q02410 837 aa7.68□□□□□ -1.18
SSB-207ENST00000465871 FSCN1Q16658 493 aaKnown RBP7.68□□□□□ -1.18
SSB-207ENST00000465871 KRTAP15-1Q3LI76 137 aa7.68□□□□□ -1.18
SSB-207ENST00000465871 LY6G5CQ5SRR4 150 aa7.68□□□□□ -1.18
SSB-207ENST00000465871 LAIR1Q6GTX8 287 aa7.68□□□□□ -1.18
SSB-207ENST00000465871 ABHD15Q6UXT9 468 aa7.68□□□□□ -1.18
SSB-207ENST00000465871 DDX46Q7L014 1031 aaKnown RBP7.68□□□□□ -1.18
SSB-207ENST00000465871 GPRIN1Q7Z2K8 1008 aa7.68□□□□□ -1.18
SSB-207ENST00000465871 HDGFL2Q7Z4V5 671 aaPredicted RBP7.68□□□□□ -1.18
SSB-207ENST00000465871 LILRA3Q8N6C8 439 aaPredicted RBP7.68□□□□□ -1.18
SSB-207ENST00000465871 CLRN3Q8NCR9 226 aa7.68□□□□□ -1.18
SSB-207ENST00000465871 PROKR1Q8TCW9 393 aa7.68□□□□□ -1.18
SSB-207ENST00000465871 PAWRQ96IZ0 340 aaKnown RBP7.68□□□□□ -1.18
SSB-207ENST00000465871 ACAP3Q96P50 834 aa7.68□□□□□ -1.18
SSB-207ENST00000465871 SLC46A2Q9BY10 475 aa7.68□□□□□ -1.18
SSB-207ENST00000465871 TOPORSQ9NS56 1045 aaPredicted RBP7.68□□□□□ -1.18
SSB-207ENST00000465871 HS3ST4Q9Y661 456 aa7.68□□□□□ -1.18
SSB-207ENST00000465871 ITGA10O75578 1167 aa7.67□□□□□ -1.18
SSB-207ENST00000465871 APOBEC3AP31941 199 aaPredicted RBP7.67□□□□□ -1.18
SSB-207ENST00000465871 ID4P47928 161 aa7.67□□□□□ -1.18
SSB-207ENST00000465871 UGT8Q16880 541 aa7.67□□□□□ -1.18
SSB-207ENST00000465871 KCNV1Q6PIU1 500 aa7.67□□□□□ -1.18
SSB-207ENST00000465871 AHRRA9YTQ3 701 aa7.66□□□□□ -1.18
SSB-207ENST00000465871 B5MCH6 92 aa7.66□□□□□ -1.18
SSB-207ENST00000465871 ENPP1P22413 925 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms