RNA–Protein interactions for RNA: ENST00000465756.5

NPHP3-203, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 3,852 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-203ENST00000465756 TNFSF13BQ9Y275 285 aa11.82□□□□□ -0.52
NPHP3-203ENST00000465756 CLIC4Q9Y696 253 aa11.82□□□□□ -0.52
NPHP3-203ENST00000465756 TRAK2O60296 914 aa11.82□□□□□ -0.52
NPHP3-203ENST00000465756 URODP06132 367 aa11.82□□□□□ -0.52
NPHP3-203ENST00000465756 PBX2P40425 430 aa11.82□□□□□ -0.52
NPHP3-203ENST00000465756 KARSQ15046 597 aaKnown RBP11.82□□□□□ -0.52
NPHP3-203ENST00000465756 CDCA2Q69YH5 1023 aaPredicted RBP11.82□□□□□ -0.52
NPHP3-203ENST00000465756 TMEM150BA6NC51 233 aa11.81□□□□□ -0.52
NPHP3-203ENST00000465756 SMC1AQ14683 1233 aaKnown RBP11.81□□□□□ -0.52
NPHP3-203ENST00000465756 MRPL10Q7Z7H8 261 aaKnown RBP11.81□□□□□ -0.52
NPHP3-203ENST00000465756 ACAP3Q96P50 834 aa11.81□□□□□ -0.52
NPHP3-203ENST00000465756 PLIN2Q99541 437 aa11.81□□□□□ -0.52
NPHP3-203ENST00000465756 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.81□□□□□ -0.52
NPHP3-203ENST00000465756 TFIP11Q9UBB9 837 aaKnown RBP11.81□□□□□ -0.52
NPHP3-203ENST00000465756 FBXO2Q9UK22 296 aaPredicted RBP11.81□□□□□ -0.52
NPHP3-203ENST00000465756 HNRNPDLO14979 420 aaKnown RBP11.81□□□□□ -0.52
NPHP3-203ENST00000465756 CLDN3O15551 220 aa11.81□□□□□ -0.52
NPHP3-203ENST00000465756 TSPAN1O60635 241 aa11.81□□□□□ -0.52
NPHP3-203ENST00000465756 SMC2O95347 1197 aa11.81□□□□□ -0.52
NPHP3-203ENST00000465756 MBTD1Q05BQ5 628 aa11.81□□□□□ -0.52
NPHP3-203ENST00000465756 GRB10Q13322 594 aa11.81□□□□□ -0.52
NPHP3-203ENST00000465756 HELQQ8TDG4 1101 aa11.81□□□□□ -0.52
NPHP3-203ENST00000465756 MRPL44Q9H9J2 332 aaKnown RBP11.81□□□□□ -0.52
NPHP3-203ENST00000465756 RMND1Q9NWS8 449 aa11.81□□□□□ -0.52
NPHP3-203ENST00000465756 CGNQ9P2M7 1197 aaKnown RBP11.81□□□□□ -0.52
NPHP3-203ENST00000465756 EVPLQ92817 2033 aa11.81□□□□□ -0.52
NPHP3-203ENST00000465756 POU3F3P20264 500 aaPredicted RBP11.81□□□□□ -0.52
NPHP3-203ENST00000465756 SNRPFP62306 86 aaKnown RBP11.81□□□□□ -0.52
NPHP3-203ENST00000465756 HERC4Q5GLZ8 1057 aaPredicted RBP11.81□□□□□ -0.52
NPHP3-203ENST00000465756 MPZL3Q6UWV2 235 aa11.81□□□□□ -0.52
NPHP3-203ENST00000465756 TMC7Q7Z402 723 aa11.81□□□□□ -0.52
NPHP3-203ENST00000465756 PPM1EQ8WY54 764 aa11.81□□□□□ -0.52
NPHP3-203ENST00000465756 FZD8Q9H461 694 aa11.81□□□□□ -0.52
NPHP3-203ENST00000465756 EXOC1Q9NV70 894 aa11.81□□□□□ -0.52
NPHP3-203ENST00000465756 CHMP5Q9NZZ3 219 aa11.81□□□□□ -0.52
NPHP3-203ENST00000465756 UBE4BO95155 1302 aa11.8□□□□□ -0.52
NPHP3-203ENST00000465756 TOM1L1O75674 476 aa11.8□□□□□ -0.52
NPHP3-203ENST00000465756 PPP1R2P41236 205 aa11.8□□□□□ -0.52
NPHP3-203ENST00000465756 NPTX2P47972 431 aa11.8□□□□□ -0.52
NPHP3-203ENST00000465756 STIM1Q13586 685 aa11.8□□□□□ -0.52
NPHP3-203ENST00000465756 GRIN2CQ14957 1233 aa11.8□□□□□ -0.52
NPHP3-203ENST00000465756 COLGALT1Q8NBJ5 622 aa11.8□□□□□ -0.52
NPHP3-203ENST00000465756 MRPS27Q92552 414 aaKnown RBP11.8□□□□□ -0.52
NPHP3-203ENST00000465756 RPF1Q9H9Y2 349 aaKnown RBP11.8□□□□□ -0.52
NPHP3-203ENST00000465756 KIAA1586Q9HCI6 787 aa11.8□□□□□ -0.52
NPHP3-203ENST00000465756 C5orf67F2Z3F1 127 aa11.8□□□□□ -0.52
NPHP3-203ENST00000465756 POU5F1Q01860 360 aaKnown RBP11.8□□□□□ -0.52
NPHP3-203ENST00000465756 MCM6Q14566 821 aa11.8□□□□□ -0.52
NPHP3-203ENST00000465756 KCNT2Q6UVM3 1135 aa11.8□□□□□ -0.52
NPHP3-203ENST00000465756 C1orf186Q6ZWK4 172 aa11.8□□□□□ -0.52
NPHP3-203ENST00000465756 Q7L0L9 218 aa11.8□□□□□ -0.52
NPHP3-203ENST00000465756 HAUS6Q7Z4H7 955 aa11.8□□□□□ -0.52
NPHP3-203ENST00000465756 CLP1Q92989 425 aaKnown RBP11.8□□□□□ -0.52
NPHP3-203ENST00000465756 GBP3Q9H0R5 595 aa11.8□□□□□ -0.52
NPHP3-203ENST00000465756 CEP350Q5VT06 3117 aa11.8□□□□□ -0.52
NPHP3-203ENST00000465756 BRD1O95696 1058 aa11.8□□□□□ -0.52
NPHP3-203ENST00000465756 THP07101 528 aa11.8□□□□□ -0.52
NPHP3-203ENST00000465756 PPP2R3AQ06190 1150 aa11.8□□□□□ -0.52
NPHP3-203ENST00000465756 NOLC1Q14978 699 aaKnown RBP eCLIP11.8□□□□□ -0.52
NPHP3-203ENST00000465756 TPRNQ4KMQ1 711 aa11.8□□□□□ -0.52
NPHP3-203ENST00000465756 KSR1Q8IVT5 923 aa11.8□□□□□ -0.52
NPHP3-203ENST00000465756 DHX58Q96C10 678 aa11.8□□□□□ -0.52
NPHP3-203ENST00000465756 ZBTB10Q96DT7 871 aa11.8□□□□□ -0.52
NPHP3-203ENST00000465756 TMX1Q9H3N1 280 aa11.8□□□□□ -0.52
NPHP3-203ENST00000465756 CERS4Q9HA82 394 aa11.8□□□□□ -0.52
NPHP3-203ENST00000465756 DZANK1Q9NVP4 752 aa11.8□□□□□ -0.52
NPHP3-203ENST00000465756 RCOR1Q9UKL0 485 aa11.8□□□□□ -0.52
NPHP3-203ENST00000465756 SLC16A4O15374 487 aa11.79□□□□□ -0.52
NPHP3-203ENST00000465756 ZC3H11AO75152 810 aaKnown RBP eCLIP11.79□□□□□ -0.52
NPHP3-203ENST00000465756 CLTAP09496 248 aa11.79□□□□□ -0.52
NPHP3-203ENST00000465756 PDILTQ8N807 584 aa11.79□□□□□ -0.52
NPHP3-203ENST00000465756 CACTINQ8WUQ7 758 aaKnown RBP11.79□□□□□ -0.52
NPHP3-203ENST00000465756 CEP89Q96ST8 783 aa11.79□□□□□ -0.52
NPHP3-203ENST00000465756 TLE6Q9H808 572 aa11.79□□□□□ -0.52
NPHP3-203ENST00000465756 CDHR5Q9HBB8 845 aa11.79□□□□□ -0.52
NPHP3-203ENST00000465756 TLR9Q9NR96 1032 aa11.79□□□□□ -0.52
NPHP3-203ENST00000465756 PANK4Q9NVE7 773 aa11.79□□□□□ -0.52
NPHP3-203ENST00000465756 MICAL3Q7RTP6 2002 aa11.79□□□□□ -0.52
NPHP3-203ENST00000465756 A0A1B0GUA9 196 aa11.79□□□□□ -0.52
NPHP3-203ENST00000465756 ATF7P17544 494 aaPredicted RBP11.79□□□□□ -0.52
NPHP3-203ENST00000465756 FGFR4P22455 802 aa11.79□□□□□ -0.52
NPHP3-203ENST00000465756 PLCB3Q01970 1234 aa11.79□□□□□ -0.52
NPHP3-203ENST00000465756 MKRN4PQ13434 485 aaPredicted RBP11.79□□□□□ -0.52
NPHP3-203ENST00000465756 GPNMBQ14956 572 aa11.79□□□□□ -0.52
NPHP3-203ENST00000465756 PTPAQ15257 358 aa11.79□□□□□ -0.52
NPHP3-203ENST00000465756 IFT122Q9HBG6 1241 aa11.79□□□□□ -0.52
NPHP3-203ENST00000465756 IPPQ9Y573 584 aa11.79□□□□□ -0.52
NPHP3-203ENST00000465756 NUB1Q9Y5A7 615 aa11.79□□□□□ -0.52
NPHP3-203ENST00000465756 COL4A6Q14031 1691 aa11.79□□□□□ -0.52
NPHP3-203ENST00000465756 PP2D1A8MPX8 630 aa11.79□□□□□ -0.52
NPHP3-203ENST00000465756 TADA2AO75478 443 aa11.79□□□□□ -0.52
NPHP3-203ENST00000465756 ARF4P18085 180 aaPredicted RBP11.79□□□□□ -0.52
NPHP3-203ENST00000465756 SYKP43405 635 aa11.79□□□□□ -0.52
NPHP3-203ENST00000465756 MRPS5P82675 430 aaKnown RBP11.79□□□□□ -0.52
NPHP3-203ENST00000465756 L1TD1Q5T7N2 865 aaKnown RBP11.79□□□□□ -0.52
NPHP3-203ENST00000465756 ADALQ6DHV7 355 aa11.79□□□□□ -0.52
NPHP3-203ENST00000465756 GPR65Q8IYL9 337 aa11.79□□□□□ -0.52
NPHP3-203ENST00000465756 TMEM40Q8WWA1 233 aa11.79□□□□□ -0.52
NPHP3-203ENST00000465756 CASP10Q92851 521 aa11.79□□□□□ -0.52
NPHP3-203ENST00000465756 HLA-CQ95604 372 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms