RNA–Protein interactions for RNA: ENST00000465525.6

PTPRU-206, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 1,650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-206ENST00000465525 TSPAN1O60635 241 aa18.83■□□□□ 0.61
PTPRU-206ENST00000465525 ERLIN2O94905 339 aa18.83■□□□□ 0.61
PTPRU-206ENST00000465525 CKBP12277 381 aa18.83■□□□□ 0.61
PTPRU-206ENST00000465525 EIF4BP23588 611 aaKnown RBP18.83■□□□□ 0.61
PTPRU-206ENST00000465525 ABCD1P33897 745 aa18.83■□□□□ 0.61
PTPRU-206ENST00000465525 CASP4P49662 377 aa18.83■□□□□ 0.61
PTPRU-206ENST00000465525 FKBP3Q00688 224 aaKnown RBP18.83■□□□□ 0.61
PTPRU-206ENST00000465525 ADAM9Q13443 819 aa18.83■□□□□ 0.61
PTPRU-206ENST00000465525 EEF1DP3Q658K8 133 aa18.83■□□□□ 0.61
PTPRU-206ENST00000465525 CEP135Q66GS9 1140 aa18.83■□□□□ 0.61
PTPRU-206ENST00000465525 CATSPER4Q7RTX7 472 aa18.83■□□□□ 0.61
PTPRU-206ENST00000465525 KCNN1Q92952 543 aa18.83■□□□□ 0.61
PTPRU-206ENST00000465525 SAAL1Q96ER3 474 aa18.83■□□□□ 0.61
PTPRU-206ENST00000465525 ACO2Q99798 780 aaKnown RBP18.83■□□□□ 0.61
PTPRU-206ENST00000465525 TMEM39AQ9NV64 488 aa18.83■□□□□ 0.61
PTPRU-206ENST00000465525 NOC2LQ9Y3T9 749 aaKnown RBP18.83■□□□□ 0.61
PTPRU-206ENST00000465525 MKI67P46013 3256 aaKnown RBP18.83■□□□□ 0.6
PTPRU-206ENST00000465525 PITPNM1O00562 1244 aa18.82■□□□□ 0.6
PTPRU-206ENST00000465525 PIGRP01833 764 aa18.82■□□□□ 0.6
PTPRU-206ENST00000465525 SCP2P22307 547 aa18.82■□□□□ 0.6
PTPRU-206ENST00000465525 TPM4P67936 248 aa18.82■□□□□ 0.6
PTPRU-206ENST00000465525 FAM26DQ5JW98 314 aa18.82■□□□□ 0.6
PTPRU-206ENST00000465525 CDKAL1Q5VV42 579 aa18.82■□□□□ 0.6
PTPRU-206ENST00000465525 POMGNT1Q8WZA1 660 aa18.82■□□□□ 0.6
PTPRU-206ENST00000465525 CNTNAP2Q9UHC6 1331 aa18.82■□□□□ 0.6
PTPRU-206ENST00000465525 TULP1O00294 542 aaPredicted RBP18.82■□□□□ 0.6
PTPRU-206ENST00000465525 AP5Z1O43299 807 aa18.82■□□□□ 0.6
PTPRU-206ENST00000465525 GHRP10912 638 aa18.82■□□□□ 0.6
PTPRU-206ENST00000465525 ZNF18P17022 549 aa18.82■□□□□ 0.6
PTPRU-206ENST00000465525 ARF4P18085 180 aaPredicted RBP18.82■□□□□ 0.6
PTPRU-206ENST00000465525 FAM187BQ17R55 369 aa18.82■□□□□ 0.6
PTPRU-206ENST00000465525 ATF7IP2Q5U623 682 aa18.82■□□□□ 0.6
PTPRU-206ENST00000465525 FAM228AQ86W67 206 aa18.82■□□□□ 0.6
PTPRU-206ENST00000465525 RDH13Q8NBN7 331 aa18.82■□□□□ 0.6
PTPRU-206ENST00000465525 GOLGA5Q8TBA6 731 aa18.82■□□□□ 0.6
PTPRU-206ENST00000465525 CNOT6LQ96LI5 555 aaKnown RBP18.82■□□□□ 0.6
PTPRU-206ENST00000465525 TCHPQ9BT92 498 aa18.82■□□□□ 0.6
PTPRU-206ENST00000465525 NOC4LQ9BVI4 516 aaKnown RBP18.82■□□□□ 0.6
PTPRU-206ENST00000465525 HIPK3Q9H422 1215 aa18.82■□□□□ 0.6
PTPRU-206ENST00000465525 THAP9Q9H5L6 903 aa18.82■□□□□ 0.6
PTPRU-206ENST00000465525 HSPBP1Q9NZL4 362 aa18.82■□□□□ 0.6
PTPRU-206ENST00000465525 TBX21Q9UL17 535 aa18.82■□□□□ 0.6
PTPRU-206ENST00000465525 UMODL1Q5DID0 1318 aa18.81■□□□□ 0.6
PTPRU-206ENST00000465525 KCNJ18B7U540 433 aa18.81■□□□□ 0.6
PTPRU-206ENST00000465525 CETN3O15182 167 aa18.81■□□□□ 0.6
PTPRU-206ENST00000465525 CDK11BP21127 795 aaKnown RBP18.81■□□□□ 0.6
PTPRU-206ENST00000465525 RPL13P26373 211 aaKnown RBP18.81■□□□□ 0.6
PTPRU-206ENST00000465525 KCNJ12Q14500 433 aa18.81■□□□□ 0.6
PTPRU-206ENST00000465525 SEZ6Q53EL9 994 aa18.81■□□□□ 0.6
PTPRU-206ENST00000465525 TRAF7Q6Q0C0 670 aa18.81■□□□□ 0.6
PTPRU-206ENST00000465525 ZPBP2Q6X784 338 aa18.81■□□□□ 0.6
PTPRU-206ENST00000465525 ZC3H3Q8IXZ2 948 aaKnown RBP18.81■□□□□ 0.6
PTPRU-206ENST00000465525 SCN5AQ14524 2016 aa18.81■□□□□ 0.6
PTPRU-206ENST00000465525 EXOC3O60645 756 aa18.8■□□□□ 0.6
PTPRU-206ENST00000465525 AKAP3O75969 853 aa18.8■□□□□ 0.6
PTPRU-206ENST00000465525 SELPP16109 830 aa18.8■□□□□ 0.6
PTPRU-206ENST00000465525 SFPQP23246 707 aaKnown RBP eCLIP18.8■□□□□ 0.6
PTPRU-206ENST00000465525 ZBTB41Q5SVQ8 909 aa18.8■□□□□ 0.6
PTPRU-206ENST00000465525 FOXR2Q6PJQ5 311 aa18.8■□□□□ 0.6
PTPRU-206ENST00000465525 PDZD7Q9H5P4 517 aa18.8■□□□□ 0.6
PTPRU-206ENST00000465525 AGO3Q9H9G7 860 aaKnown RBP18.8■□□□□ 0.6
PTPRU-206ENST00000465525 DMAC2Q9NW81 257 aa18.8■□□□□ 0.6
PTPRU-206ENST00000465525 PCDH10Q9P2E7 1040 aa18.8■□□□□ 0.6
PTPRU-206ENST00000465525 ALPK3Q96L96 1907 aa18.8■□□□□ 0.6
PTPRU-206ENST00000465525 TANC1Q9C0D5 1861 aa18.79■□□□□ 0.6
PTPRU-206ENST00000465525 ABLIM1O14639 778 aa18.79■□□□□ 0.6
PTPRU-206ENST00000465525 KIAA0355O15063 1070 aa18.79■□□□□ 0.6
PTPRU-206ENST00000465525 RPS6KA5O75582 802 aa18.79■□□□□ 0.6
PTPRU-206ENST00000465525 TOM1L1O75674 476 aa18.79■□□□□ 0.6
PTPRU-206ENST00000465525 CD52P31358 61 aa18.79■□□□□ 0.6
PTPRU-206ENST00000465525 LPIN1Q14693 890 aa18.79■□□□□ 0.6
PTPRU-206ENST00000465525 MBTPS1Q14703 1052 aa18.79■□□□□ 0.6
PTPRU-206ENST00000465525 ZNF568Q3ZCX4 644 aa18.79■□□□□ 0.6
PTPRU-206ENST00000465525 CCDC40Q4G0X9 1142 aa18.79■□□□□ 0.6
PTPRU-206ENST00000465525 FBXO47Q5MNV8 452 aa18.79■□□□□ 0.6
PTPRU-206ENST00000465525 TSHZ1Q6ZSZ6 1077 aa18.79■□□□□ 0.6
PTPRU-206ENST00000465525 LRRC8DQ7L1W4 858 aa18.79■□□□□ 0.6
PTPRU-206ENST00000465525 PRIMPOLQ96LW4 560 aa18.79■□□□□ 0.6
PTPRU-206ENST00000465525 CEP63Q96MT8 703 aa18.79■□□□□ 0.6
PTPRU-206ENST00000465525 FAM213AQ9BRX8 229 aa18.79■□□□□ 0.6
PTPRU-206ENST00000465525 MSTO1Q9BUK6 570 aa18.79■□□□□ 0.6
PTPRU-206ENST00000465525 PPP1R12CQ9BZL4 782 aa18.79■□□□□ 0.6
PTPRU-206ENST00000465525 TAB2Q9NYJ8 693 aa18.79■□□□□ 0.6
PTPRU-206ENST00000465525 CGNQ9P2M7 1197 aaKnown RBP18.79■□□□□ 0.6
PTPRU-206ENST00000465525 MAGEC2Q9UBF1 373 aaPredicted RBP18.79■□□□□ 0.6
PTPRU-206ENST00000465525 PIN4Q9Y237 131 aaKnown RBP18.79■□□□□ 0.6
PTPRU-206ENST00000465525 TNFSF13BQ9Y275 285 aa18.79■□□□□ 0.6
PTPRU-206ENST00000465525 A0A0B4J269 797 aa18.79■□□□□ 0.6
PTPRU-206ENST00000465525 CLDN3O15551 220 aa18.79■□□□□ 0.6
PTPRU-206ENST00000465525 FGFR1OPO95684 399 aaKnown RBP18.79■□□□□ 0.6
PTPRU-206ENST00000465525 HOXA11P31270 313 aaPredicted RBP18.79■□□□□ 0.6
PTPRU-206ENST00000465525 ACOT2P49753 483 aa18.79■□□□□ 0.6
PTPRU-206ENST00000465525 SNRPFP62306 86 aaKnown RBP18.79■□□□□ 0.6
PTPRU-206ENST00000465525 NFX1Q12986 1120 aaKnown RBP18.79■□□□□ 0.6
PTPRU-206ENST00000465525 NFIL3Q16649 462 aa18.79■□□□□ 0.6
PTPRU-206ENST00000465525 UVSSAQ2YD98 709 aa18.79■□□□□ 0.6
PTPRU-206ENST00000465525 TCP11X2Q5H9J9 407 aa18.79■□□□□ 0.6
PTPRU-206ENST00000465525 MPZL3Q6UWV2 235 aa18.79■□□□□ 0.6
PTPRU-206ENST00000465525 C12orf56Q8IXR9 622 aa18.79■□□□□ 0.6
PTPRU-206ENST00000465525 XXYLT1Q8NBI6 393 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms