RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 ACKR2O00590 384 aa18.52■□□□□ 0.56
EXOSC3-203ENST00000465229 KIF20AO95235 890 aa18.52■□□□□ 0.56
EXOSC3-203ENST00000465229 CDK11BP21127 795 aaKnown RBP18.52■□□□□ 0.56
EXOSC3-203ENST00000465229 PPP1R2P41236 205 aa18.52■□□□□ 0.56
EXOSC3-203ENST00000465229 PPP4R3CPQ6ZMV5 832 aa18.52■□□□□ 0.56
EXOSC3-203ENST00000465229 LRRC8DQ7L1W4 858 aa18.52■□□□□ 0.56
EXOSC3-203ENST00000465229 DHTKD1Q96HY7 919 aaPredicted RBP18.52■□□□□ 0.56
EXOSC3-203ENST00000465229 SEMA6BQ9H3T3 888 aa18.52■□□□□ 0.56
EXOSC3-203ENST00000465229 TMEM206Q9H813 350 aa18.52■□□□□ 0.56
EXOSC3-203ENST00000465229 KCND1Q9NSA2 647 aa18.52■□□□□ 0.56
EXOSC3-203ENST00000465229 PRMT7Q9NVM4 692 aaPredicted RBP18.52■□□□□ 0.56
EXOSC3-203ENST00000465229 PSMA7O14818 248 aa18.52■□□□□ 0.55
EXOSC3-203ENST00000465229 B4GALT5O43286 388 aa18.52■□□□□ 0.55
EXOSC3-203ENST00000465229 TGFB1I1O43294 461 aa18.52■□□□□ 0.55
EXOSC3-203ENST00000465229 KCNJ6P48051 423 aa18.52■□□□□ 0.55
EXOSC3-203ENST00000465229 PMS1P54277 932 aaKnown RBP18.52■□□□□ 0.55
EXOSC3-203ENST00000465229 LPIN1Q14693 890 aa18.52■□□□□ 0.55
EXOSC3-203ENST00000465229 CENPPQ6IPU0 288 aa18.52■□□□□ 0.55
EXOSC3-203ENST00000465229 FAM228AQ86W67 206 aa18.52■□□□□ 0.55
EXOSC3-203ENST00000465229 SYCP3Q8IZU3 236 aa18.52■□□□□ 0.55
EXOSC3-203ENST00000465229 NELFBQ8WX92 580 aa18.52■□□□□ 0.55
EXOSC3-203ENST00000465229 NAP1L5Q96NT1 182 aaPredicted RBP18.52■□□□□ 0.55
EXOSC3-203ENST00000465229 TARS2Q9BW92 718 aaKnown RBP18.52■□□□□ 0.55
EXOSC3-203ENST00000465229 PPP1R12CQ9BZL4 782 aa18.52■□□□□ 0.55
EXOSC3-203ENST00000465229 AGO3Q9H9G7 860 aaKnown RBP18.52■□□□□ 0.55
EXOSC3-203ENST00000465229 SQORQ9Y6N5 450 aa18.52■□□□□ 0.55
EXOSC3-203ENST00000465229 ZMYM2Q9UBW7 1377 aa18.52■□□□□ 0.55
EXOSC3-203ENST00000465229 TRIM43BA6NCK2 446 aa18.51■□□□□ 0.55
EXOSC3-203ENST00000465229 RPS6KA5O75582 802 aa18.51■□□□□ 0.55
EXOSC3-203ENST00000465229 PIGRP01833 764 aa18.51■□□□□ 0.55
EXOSC3-203ENST00000465229 GHRP10912 638 aa18.51■□□□□ 0.55
EXOSC3-203ENST00000465229 SFPQP23246 707 aaKnown RBP eCLIP18.51■□□□□ 0.55
EXOSC3-203ENST00000465229 CYP2C18P33260 490 aa18.51■□□□□ 0.55
EXOSC3-203ENST00000465229 CCZ1BP86790 482 aa18.51■□□□□ 0.55
EXOSC3-203ENST00000465229 CCZ1P86791 482 aaPredicted RBP18.51■□□□□ 0.55
EXOSC3-203ENST00000465229 PAK1Q13153 545 aa18.51■□□□□ 0.55
EXOSC3-203ENST00000465229 PRPF4BQ13523 1007 aaKnown RBP18.51■□□□□ 0.55
EXOSC3-203ENST00000465229 GPNMBQ14956 572 aa18.51■□□□□ 0.55
EXOSC3-203ENST00000465229 PCBP1Q15365 356 aaKnown RBP eCLIP18.51■□□□□ 0.55
EXOSC3-203ENST00000465229 CATSPER4Q7RTX7 472 aa18.51■□□□□ 0.55
EXOSC3-203ENST00000465229 TRIM43Q96BQ3 446 aaPredicted RBP18.51■□□□□ 0.55
EXOSC3-203ENST00000465229 PRIMPOLQ96LW4 560 aa18.51■□□□□ 0.55
EXOSC3-203ENST00000465229 MRPL4Q9BYD3 311 aaKnown RBP18.51■□□□□ 0.55
EXOSC3-203ENST00000465229 GBP3Q9H0R5 595 aa18.51■□□□□ 0.55
EXOSC3-203ENST00000465229 WNT8AQ9H1J5 351 aa18.51■□□□□ 0.55
EXOSC3-203ENST00000465229 SAMSN1Q9NSI8 373 aaKnown RBP18.51■□□□□ 0.55
EXOSC3-203ENST00000465229 EXOC7Q9UPT5 735 aa18.51■□□□□ 0.55
EXOSC3-203ENST00000465229 A0A1B0GTH6 734 aa18.5■□□□□ 0.55
EXOSC3-203ENST00000465229 TISP43B9A030 160 aa18.5■□□□□ 0.55
EXOSC3-203ENST00000465229 ANKRD63C9JTQ0 380 aa18.5■□□□□ 0.55
EXOSC3-203ENST00000465229 PDXKO00764 312 aa18.5■□□□□ 0.55
EXOSC3-203ENST00000465229 KIAA0355O15063 1070 aa18.5■□□□□ 0.55
EXOSC3-203ENST00000465229 NRDCO43847 1150 aa18.5■□□□□ 0.55
EXOSC3-203ENST00000465229 TSPAN1O60635 241 aa18.5■□□□□ 0.55
EXOSC3-203ENST00000465229 CCNE1P24864 410 aa18.5■□□□□ 0.55
EXOSC3-203ENST00000465229 HOXA11P31270 313 aaPredicted RBP18.5■□□□□ 0.55
EXOSC3-203ENST00000465229 CCL23P55773 120 aa18.5■□□□□ 0.55
EXOSC3-203ENST00000465229 STX17P56962 302 aa18.5■□□□□ 0.55
EXOSC3-203ENST00000465229 ZCWPW2Q504Y3 356 aa18.5■□□□□ 0.55
EXOSC3-203ENST00000465229 SLC39A4Q6P5W5 647 aa18.5■□□□□ 0.55
EXOSC3-203ENST00000465229 P2RX5Q93086 422 aa18.5■□□□□ 0.55
EXOSC3-203ENST00000465229 BICD1Q96G01 975 aa18.5■□□□□ 0.55
EXOSC3-203ENST00000465229 ACO2Q99798 780 aaKnown RBP18.5■□□□□ 0.55
EXOSC3-203ENST00000465229 INTS13Q9NVM9 706 aa18.5■□□□□ 0.55
EXOSC3-203ENST00000465229 ST3GAL5Q9UNP4 418 aa18.5■□□□□ 0.55
EXOSC3-203ENST00000465229 CTNND2Q9UQB3 1225 aa18.5■□□□□ 0.55
EXOSC3-203ENST00000465229 HNRNPDLO14979 420 aaKnown RBP18.49■□□□□ 0.55
EXOSC3-203ENST00000465229 ERLIN2O94905 339 aa18.49■□□□□ 0.55
EXOSC3-203ENST00000465229 SKILP12757 684 aa18.49■□□□□ 0.55
EXOSC3-203ENST00000465229 ARF4P18085 180 aaPredicted RBP18.49■□□□□ 0.55
EXOSC3-203ENST00000465229 ITGB8P26012 769 aa18.49■□□□□ 0.55
EXOSC3-203ENST00000465229 CD52P31358 61 aa18.49■□□□□ 0.55
EXOSC3-203ENST00000465229 SPAG1Q07617 926 aa18.49■□□□□ 0.55
EXOSC3-203ENST00000465229 NR1I3Q14994 352 aa18.49■□□□□ 0.55
EXOSC3-203ENST00000465229 ANKRD40Q6AI12 368 aa18.49■□□□□ 0.55
EXOSC3-203ENST00000465229 ZPBP2Q6X784 338 aa18.49■□□□□ 0.55
EXOSC3-203ENST00000465229 APTXQ7Z2E3 356 aaKnown RBP18.49■□□□□ 0.55
EXOSC3-203ENST00000465229 USP38Q8NB14 1042 aa18.49■□□□□ 0.55
EXOSC3-203ENST00000465229 PRDM5Q9NQX1 630 aaPredicted RBP18.49■□□□□ 0.55
EXOSC3-203ENST00000465229 TYW1Q9NV66 732 aaKnown RBP18.49■□□□□ 0.55
EXOSC3-203ENST00000465229 PADI3Q9ULW8 664 aa18.49■□□□□ 0.55
EXOSC3-203ENST00000465229 TRAF3IP3Q9Y228 551 aa18.49■□□□□ 0.55
EXOSC3-203ENST00000465229 CNTNAP2Q9UHC6 1331 aa18.49■□□□□ 0.55
EXOSC3-203ENST00000465229 TRIM49BA6NDI0 452 aa18.49■□□□□ 0.55
EXOSC3-203ENST00000465229 LRRC10BA6NIK2 292 aa18.49■□□□□ 0.55
EXOSC3-203ENST00000465229 GPR182O15218 404 aa18.49■□□□□ 0.55
EXOSC3-203ENST00000465229 NBNO60934 754 aa18.49■□□□□ 0.55
EXOSC3-203ENST00000465229 TIMP1P01033 207 aa18.49■□□□□ 0.55
EXOSC3-203ENST00000465229 ADSSP30520 456 aa18.49■□□□□ 0.55
EXOSC3-203ENST00000465229 LIG4P49917 911 aa18.49■□□□□ 0.55
EXOSC3-203ENST00000465229 NFX1Q12986 1120 aaKnown RBP18.49■□□□□ 0.55
EXOSC3-203ENST00000465229 ARID5BQ14865 1188 aa18.49■□□□□ 0.55
EXOSC3-203ENST00000465229 TTI2Q6NXR4 508 aa18.49■□□□□ 0.55
EXOSC3-203ENST00000465229 ARMCX5Q6P1M9 558 aa18.49■□□□□ 0.55
EXOSC3-203ENST00000465229 TSHZ1Q6ZSZ6 1077 aa18.49■□□□□ 0.55
EXOSC3-203ENST00000465229 HS2ST1Q7LGA3 356 aa18.49■□□□□ 0.55
EXOSC3-203ENST00000465229 CCDC112Q8NEF3 446 aa18.49■□□□□ 0.55
EXOSC3-203ENST00000465229 SCLYQ96I15 445 aa18.49■□□□□ 0.55
EXOSC3-203ENST00000465229 CPB2Q96IY4 423 aa18.49■□□□□ 0.55
EXOSC3-203ENST00000465229 ZBTB45Q96K62 511 aaPredicted RBP18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms