RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 STK10O94804 968 aaKnown RBP9.69□□□□□ -0.86
HPS4-208ENST00000464362 PON1P27169 355 aa9.69□□□□□ -0.86
HPS4-208ENST00000464362 RPA1P27694 616 aa9.69□□□□□ -0.86
HPS4-208ENST00000464362 CA8P35219 290 aa9.69□□□□□ -0.86
HPS4-208ENST00000464362 LMNB2Q03252 620 aa9.69□□□□□ -0.86
HPS4-208ENST00000464362 WDR59Q6PJI9 974 aa9.69□□□□□ -0.86
HPS4-208ENST00000464362 SH3RF1Q7Z6J0 888 aa9.69□□□□□ -0.86
HPS4-208ENST00000464362 TMEM139Q8IV31 216 aa9.69□□□□□ -0.86
HPS4-208ENST00000464362 KIRREL3Q8IZU9 778 aa9.69□□□□□ -0.86
HPS4-208ENST00000464362 FBXL13Q8NEE6 735 aa9.69□□□□□ -0.86
HPS4-208ENST00000464362 SEC16BQ96JE7 1060 aa9.69□□□□□ -0.86
HPS4-208ENST00000464362 TMEM117Q9H0C3 514 aa9.69□□□□□ -0.86
HPS4-208ENST00000464362 CD248Q9HCU0 757 aa9.69□□□□□ -0.86
HPS4-208ENST00000464362 RNF146Q9NTX7 359 aa9.69□□□□□ -0.86
HPS4-208ENST00000464362 HSPBP1Q9NZL4 362 aa9.69□□□□□ -0.86
HPS4-208ENST00000464362 POLLQ9UGP5 575 aa9.69□□□□□ -0.86
HPS4-208ENST00000464362 RAB21Q9UL25 225 aa9.69□□□□□ -0.86
HPS4-208ENST00000464362 TRPC5Q9UL62 973 aaPredicted RBP9.69□□□□□ -0.86
HPS4-208ENST00000464362 SLIT1O75093 1534 aa9.69□□□□□ -0.86
HPS4-208ENST00000464362 KCNA1Q09470 495 aa9.69□□□□□ -0.86
HPS4-208ENST00000464362 COG2Q14746 738 aa9.69□□□□□ -0.86
HPS4-208ENST00000464362 EDRF1Q3B7T1 1238 aa9.69□□□□□ -0.86
HPS4-208ENST00000464362 SLC27A3Q5K4L6 730 aa9.69□□□□□ -0.86
HPS4-208ENST00000464362 SNRNP48Q6IEG0 339 aaKnown RBP9.69□□□□□ -0.86
HPS4-208ENST00000464362 ZC3H18Q86VM9 953 aaKnown RBP9.69□□□□□ -0.86
HPS4-208ENST00000464362 TPCN2Q8NHX9 752 aa9.69□□□□□ -0.86
HPS4-208ENST00000464362 ACER1Q8TDN7 264 aa9.69□□□□□ -0.86
HPS4-208ENST00000464362 GBP5Q96PP8 586 aa9.69□□□□□ -0.86
HPS4-208ENST00000464362 PNMA5Q96PV4 448 aa9.69□□□□□ -0.86
HPS4-208ENST00000464362 VCXQ9H320 206 aa9.69□□□□□ -0.86
HPS4-208ENST00000464362 INPP5FQ9Y2H2 1132 aa9.69□□□□□ -0.86
HPS4-208ENST00000464362 CCDC195A0A1B0GUA6 201 aa9.68□□□□□ -0.86
HPS4-208ENST00000464362 PDIA2Q13087 525 aaKnown RBP9.68□□□□□ -0.86
HPS4-208ENST00000464362 PTGISQ16647 500 aa9.68□□□□□ -0.86
HPS4-208ENST00000464362 SEZ6Q53EL9 994 aa9.68□□□□□ -0.86
HPS4-208ENST00000464362 CENPUQ71F23 418 aa9.68□□□□□ -0.86
HPS4-208ENST00000464362 CDR2LQ86X02 465 aaPredicted RBP9.68□□□□□ -0.86
HPS4-208ENST00000464362 MYCBPAPQ8TBZ2 947 aa9.68□□□□□ -0.86
HPS4-208ENST00000464362 C18orf8Q96DM3 657 aa9.68□□□□□ -0.86
HPS4-208ENST00000464362 HEXIM2Q96MH2 286 aaKnown RBP9.68□□□□□ -0.86
HPS4-208ENST00000464362 BLOC1S4Q9NUP1 217 aa9.68□□□□□ -0.86
HPS4-208ENST00000464362 CSADQ9Y600 493 aa9.68□□□□□ -0.86
HPS4-208ENST00000464362 MSH4O15457 936 aa9.68□□□□□ -0.86
HPS4-208ENST00000464362 ESRRAP11474 423 aaPredicted RBP9.68□□□□□ -0.86
HPS4-208ENST00000464362 GNA15P30679 374 aa9.68□□□□□ -0.86
HPS4-208ENST00000464362 ORC2Q13416 577 aaPredicted RBP9.68□□□□□ -0.86
HPS4-208ENST00000464362 EAPPQ56P03 285 aaPredicted RBP9.68□□□□□ -0.86
HPS4-208ENST00000464362 FAM160B2Q86V87 743 aa9.68□□□□□ -0.86
HPS4-208ENST00000464362 PARP9Q8IXQ6 854 aa9.68□□□□□ -0.86
HPS4-208ENST00000464362 TRIM11Q96F44 468 aa9.68□□□□□ -0.86
HPS4-208ENST00000464362 SCYL1Q96KG9 808 aa9.68□□□□□ -0.86
HPS4-208ENST00000464362 AGBL1Q96MI9 1066 aa9.68□□□□□ -0.86
HPS4-208ENST00000464362 XPO6Q96QU8 1125 aaKnown RBP9.68□□□□□ -0.86
HPS4-208ENST00000464362 MTRQ99707 1265 aa9.68□□□□□ -0.86
HPS4-208ENST00000464362 ADPGKQ9BRR6 497 aa9.68□□□□□ -0.86
HPS4-208ENST00000464362 ZHX2Q9Y6X8 837 aa9.68□□□□□ -0.86
HPS4-208ENST00000464362 H0YCG3 227 aa9.68□□□□□ -0.86
HPS4-208ENST00000464362 HNRNPH1P31943 449 aaKnown RBP9.68□□□□□ -0.86
HPS4-208ENST00000464362 SPARCL1Q14515 664 aa9.68□□□□□ -0.86
HPS4-208ENST00000464362 PHLDB3Q6NSJ2 640 aa9.68□□□□□ -0.86
HPS4-208ENST00000464362 RINT1Q6NUQ1 792 aa9.68□□□□□ -0.86
HPS4-208ENST00000464362 LRP10Q7Z4F1 713 aa9.68□□□□□ -0.86
HPS4-208ENST00000464362 CREG2Q8IUH2 290 aa9.68□□□□□ -0.86
HPS4-208ENST00000464362 PPM1NQ8N819 430 aa9.68□□□□□ -0.86
HPS4-208ENST00000464362 PPP4R1Q8TF05 950 aa9.68□□□□□ -0.86
HPS4-208ENST00000464362 TMEM143Q96AN5 459 aa9.68□□□□□ -0.86
HPS4-208ENST00000464362 ERP44Q9BS26 406 aa9.68□□□□□ -0.86
HPS4-208ENST00000464362 SLC13A1Q9BZW2 595 aa9.68□□□□□ -0.86
HPS4-208ENST00000464362 PPARGC1AQ9UBK2 798 aaKnown RBP9.68□□□□□ -0.86
HPS4-208ENST00000464362 USP20Q9Y2K6 914 aa9.68□□□□□ -0.86
HPS4-208ENST00000464362 MYO3BQ8WXR4 1341 aa9.68□□□□□ -0.86
HPS4-208ENST00000464362 CFAP69A5D8W1 941 aa9.68□□□□□ -0.86
HPS4-208ENST00000464362 SMIM24O75264 130 aa9.68□□□□□ -0.86
HPS4-208ENST00000464362 CPP00450 1065 aa9.68□□□□□ -0.86
HPS4-208ENST00000464362 P4HA1P13674 534 aa9.68□□□□□ -0.86
HPS4-208ENST00000464362 YWHABP31946 246 aaKnown RBP9.68□□□□□ -0.86
HPS4-208ENST00000464362 YWHAEP62258 255 aaKnown RBP9.68□□□□□ -0.86
HPS4-208ENST00000464362 MKRN3Q13064 507 aaKnown RBP9.68□□□□□ -0.86
HPS4-208ENST00000464362 BYSLQ13895 437 aaKnown RBP9.68□□□□□ -0.86
HPS4-208ENST00000464362 DCAF15Q66K64 600 aa9.68□□□□□ -0.86
HPS4-208ENST00000464362 POP1Q99575 1024 aaKnown RBP9.68□□□□□ -0.86
HPS4-208ENST00000464362 CBWD1Q9BRT8 395 aa9.68□□□□□ -0.86
HPS4-208ENST00000464362 ISCUQ9H1K1 167 aa9.68□□□□□ -0.86
HPS4-208ENST00000464362 VCX3BQ9H321 246 aa9.68□□□□□ -0.86
HPS4-208ENST00000464362 ECT2Q9H8V3 914 aa9.68□□□□□ -0.86
HPS4-208ENST00000464362 UBR1Q8IWV7 1749 aa9.67□□□□□ -0.86
HPS4-208ENST00000464362 FER1L4A9Z1Z3 1794 aa9.67□□□□□ -0.86
HPS4-208ENST00000464362 A6NJR5 290 aa9.67□□□□□ -0.86
HPS4-208ENST00000464362 PSAPP07602 524 aa9.67□□□□□ -0.86
HPS4-208ENST00000464362 EPHA7Q15375 998 aa9.67□□□□□ -0.86
HPS4-208ENST00000464362 BARGINQ6ZT62 677 aa9.67□□□□□ -0.86
HPS4-208ENST00000464362 DNAAF3Q8N9W5 541 aa9.67□□□□□ -0.86
HPS4-208ENST00000464362 MCUQ8NE86 351 aa9.67□□□□□ -0.86
HPS4-208ENST00000464362 EPS8L3Q8TE67 593 aaKnown RBP9.67□□□□□ -0.86
HPS4-208ENST00000464362 LRRC37BQ96QE4 947 aa9.67□□□□□ -0.86
HPS4-208ENST00000464362 MED10Q9BTT4 135 aa9.67□□□□□ -0.86
HPS4-208ENST00000464362 RTFDC1Q9BY42 306 aaPredicted RBP9.67□□□□□ -0.86
HPS4-208ENST00000464362 HSD3B7Q9H2F3 369 aa9.67□□□□□ -0.86
HPS4-208ENST00000464362 AS3MTQ9HBK9 375 aa9.67□□□□□ -0.86
HPS4-208ENST00000464362 ATF5Q9Y2D1 282 aaPredicted RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms