RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 MFSD14AQ96MC6 490 aa23.58■■□□□ 1.36
PDLIM2-216ENST00000464275 AZI2Q9H6S1 392 aa23.58■■□□□ 1.36
PDLIM2-216ENST00000464275 SALL4Q9UJQ4 1053 aa23.58■■□□□ 1.36
PDLIM2-216ENST00000464275 ASB14A6NK59 587 aa23.57■■□□□ 1.36
PDLIM2-216ENST00000464275 BTNL10A8MVZ5 291 aa23.57■■□□□ 1.36
PDLIM2-216ENST00000464275 HNRNPDLO14979 420 aaKnown RBP23.57■■□□□ 1.36
PDLIM2-216ENST00000464275 LGR5O75473 907 aa23.57■■□□□ 1.36
PDLIM2-216ENST00000464275 CYP2C8P10632 490 aa23.57■■□□□ 1.36
PDLIM2-216ENST00000464275 GLRA2P23416 452 aa23.57■■□□□ 1.36
PDLIM2-216ENST00000464275 MXI1P50539 228 aa23.57■■□□□ 1.36
PDLIM2-216ENST00000464275 CCNA1P78396 465 aa23.57■■□□□ 1.36
PDLIM2-216ENST00000464275 STRN3Q13033 797 aa23.57■■□□□ 1.36
PDLIM2-216ENST00000464275 KIAA0753Q2KHM9 967 aa23.57■■□□□ 1.36
PDLIM2-216ENST00000464275 HDXQ7Z353 690 aa23.57■■□□□ 1.36
PDLIM2-216ENST00000464275 USP37Q86T82 979 aa23.57■■□□□ 1.36
PDLIM2-216ENST00000464275 ASAP3Q8TDY4 903 aa23.57■■□□□ 1.36
PDLIM2-216ENST00000464275 GPR88Q9GZN0 384 aa23.57■■□□□ 1.36
PDLIM2-216ENST00000464275 TMEM117Q9H0C3 514 aa23.57■■□□□ 1.36
PDLIM2-216ENST00000464275 NAGPAQ9UK23 515 aa23.57■■□□□ 1.36
PDLIM2-216ENST00000464275 NENFQ9UMX5 172 aa23.57■■□□□ 1.36
PDLIM2-216ENST00000464275 POTEJP0CG39 1038 aa23.56■■□□□ 1.36
PDLIM2-216ENST00000464275 GTF2A2P52657 109 aa23.56■■□□□ 1.36
PDLIM2-216ENST00000464275 FKBP1BP68106 108 aa23.56■■□□□ 1.36
PDLIM2-216ENST00000464275 CKAP4Q07065 602 aaKnown RBP23.56■■□□□ 1.36
PDLIM2-216ENST00000464275 GPRC5AQ8NFJ5 357 aa23.56■■□□□ 1.36
PDLIM2-216ENST00000464275 PARD3BQ8TEW8 1205 aa23.56■■□□□ 1.36
PDLIM2-216ENST00000464275 GPR20Q99678 358 aa23.56■■□□□ 1.36
PDLIM2-216ENST00000464275 EPC1Q9H2F5 836 aa23.56■■□□□ 1.36
PDLIM2-216ENST00000464275 PRLRP16471 622 aa23.56■■□□□ 1.36
PDLIM2-216ENST00000464275 ALKBH5Q6P6C2 394 aaKnown RBP23.56■■□□□ 1.36
PDLIM2-216ENST00000464275 DEPTORQ8TB45 409 aa23.56■■□□□ 1.36
PDLIM2-216ENST00000464275 PDHXO00330 501 aa23.55■■□□□ 1.36
PDLIM2-216ENST00000464275 KIAA0391O15091 583 aaKnown RBP23.55■■□□□ 1.36
PDLIM2-216ENST00000464275 MAFO75444 373 aaPredicted RBP23.55■■□□□ 1.36
PDLIM2-216ENST00000464275 KLRC1P26715 233 aa23.55■■□□□ 1.36
PDLIM2-216ENST00000464275 GTF2H1P32780 548 aa23.55■■□□□ 1.36
PDLIM2-216ENST00000464275 CYP2C19P33261 490 aa23.55■■□□□ 1.36
PDLIM2-216ENST00000464275 LIG4P49917 911 aa23.55■■□□□ 1.36
PDLIM2-216ENST00000464275 NAP1L1P55209 391 aaKnown RBP23.55■■□□□ 1.36
PDLIM2-216ENST00000464275 CYP24A1Q07973 514 aa23.55■■□□□ 1.36
PDLIM2-216ENST00000464275 BEND6Q5SZJ8 279 aaPredicted RBP23.55■■□□□ 1.36
PDLIM2-216ENST00000464275 WDR93Q6P2C0 686 aa23.55■■□□□ 1.36
PDLIM2-216ENST00000464275 CCDC62Q6P9F0 684 aa23.55■■□□□ 1.36
PDLIM2-216ENST00000464275 DHX37Q8IY37 1157 aaKnown RBP23.55■■□□□ 1.36
PDLIM2-216ENST00000464275 BBXQ8WY36 941 aaPredicted RBP23.55■■□□□ 1.36
PDLIM2-216ENST00000464275 MS4A4AQ96JQ5 239 aa23.55■■□□□ 1.36
PDLIM2-216ENST00000464275 EFCC1Q9HA90 598 aa23.55■■□□□ 1.36
PDLIM2-216ENST00000464275 KIAA1586Q9HCI6 787 aa23.55■■□□□ 1.36
PDLIM2-216ENST00000464275 SNX12Q9UMY4 172 aa23.55■■□□□ 1.36
PDLIM2-216ENST00000464275 NOP56O00567 594 aaKnown RBP23.54■■□□□ 1.36
PDLIM2-216ENST00000464275 BUB1O43683 1085 aa23.54■■□□□ 1.36
PDLIM2-216ENST00000464275 PIGRP01833 764 aa23.54■■□□□ 1.36
PDLIM2-216ENST00000464275 TFRCP02786 760 aaKnown RBP23.54■■□□□ 1.36
PDLIM2-216ENST00000464275 ARHGAP44Q17R89 818 aa23.54■■□□□ 1.36
PDLIM2-216ENST00000464275 KRT39Q6A163 491 aa23.54■■□□□ 1.36
PDLIM2-216ENST00000464275 PLPPR4Q7Z2D5 763 aa23.54■■□□□ 1.36
PDLIM2-216ENST00000464275 FBXO16Q8IX29 292 aaPredicted RBP23.54■■□□□ 1.36
PDLIM2-216ENST00000464275 PACSIN1Q9BY11 444 aa23.54■■□□□ 1.36
PDLIM2-216ENST00000464275 TMEM8AQ9HCN3 771 aa23.54■■□□□ 1.36
PDLIM2-216ENST00000464275 UBE2TQ9NPD8 197 aaPredicted RBP23.54■■□□□ 1.36
PDLIM2-216ENST00000464275 ST7Q9NRC1 585 aa23.54■■□□□ 1.36
PDLIM2-216ENST00000464275 LRRIQ4A6NIV6 560 aa23.54■■□□□ 1.36
PDLIM2-216ENST00000464275 LRRIQ3A6PVS8 624 aaPredicted RBP23.54■■□□□ 1.36
PDLIM2-216ENST00000464275 GLG1Q92896 1179 aa23.54■■□□□ 1.36
PDLIM2-216ENST00000464275 TMEM134Q9H6X4 195 aa23.54■■□□□ 1.36
PDLIM2-216ENST00000464275 INTUQ9ULD6 942 aa23.54■■□□□ 1.36
PDLIM2-216ENST00000464275 COQ4Q9Y3A0 265 aa23.54■■□□□ 1.36
PDLIM2-216ENST00000464275 STYXL1Q9Y6J8 313 aa23.54■■□□□ 1.36
PDLIM2-216ENST00000464275 CCL15-CCL14A0A0B4J2E2 113 aa23.53■■□□□ 1.36
PDLIM2-216ENST00000464275 K7ERI5 159 aa23.53■■□□□ 1.36
PDLIM2-216ENST00000464275 DDX3XO00571 662 aaKnown RBP eCLIP23.53■■□□□ 1.369e-11■■■■■ 33.8
PDLIM2-216ENST00000464275 SRGAP2O75044 1071 aa23.53■■□□□ 1.36
PDLIM2-216ENST00000464275 OAS2P29728 719 aaKnown RBP23.53■■□□□ 1.36
PDLIM2-216ENST00000464275 KIF22Q14807 665 aa23.53■■□□□ 1.36
PDLIM2-216ENST00000464275 CCL15Q16663 113 aa23.53■■□□□ 1.36
PDLIM2-216ENST00000464275 ANKRD23Q86SG2 305 aa23.53■■□□□ 1.36
PDLIM2-216ENST00000464275 ARHGEF19Q8IW93 802 aa23.53■■□□□ 1.36
PDLIM2-216ENST00000464275 EXOC8Q8IYI6 725 aa23.53■■□□□ 1.36
PDLIM2-216ENST00000464275 CCDC127Q96BQ5 260 aa23.53■■□□□ 1.36
PDLIM2-216ENST00000464275 TSKSQ9UJT2 592 aa23.53■■□□□ 1.36
PDLIM2-216ENST00000464275 EVPLQ92817 2033 aa23.53■■□□□ 1.36
PDLIM2-216ENST00000464275 ZNF233A6NK53 670 aa23.52■■□□□ 1.36
PDLIM2-216ENST00000464275 BTBD19C9JJ37 291 aa23.52■■□□□ 1.36
PDLIM2-216ENST00000464275 EXTL3O43909 919 aa23.52■■□□□ 1.36
PDLIM2-216ENST00000464275 GCLCP48506 637 aaPredicted RBP23.52■■□□□ 1.36
PDLIM2-216ENST00000464275 MAP2K1Q02750 393 aaPredicted RBP23.52■■□□□ 1.36
PDLIM2-216ENST00000464275 TTLL4Q14679 1199 aa23.52■■□□□ 1.36
PDLIM2-216ENST00000464275 HSDL1Q3SXM5 330 aa23.52■■□□□ 1.36
PDLIM2-216ENST00000464275 SLFN12LQ6IEE8 588 aa23.52■■□□□ 1.36
PDLIM2-216ENST00000464275 SLC30A5Q8TAD4 765 aa23.52■■□□□ 1.36
PDLIM2-216ENST00000464275 SPATA33Q96N06 139 aa23.52■■□□□ 1.36
PDLIM2-216ENST00000464275 GBA2Q9HCG7 927 aaPredicted RBP23.52■■□□□ 1.36
PDLIM2-216ENST00000464275 HYOU1Q9Y4L1 999 aa23.52■■□□□ 1.36
PDLIM2-216ENST00000464275 FOXN3O00409 490 aaPredicted RBP23.52■■□□□ 1.36
PDLIM2-216ENST00000464275 GAS2O43903 313 aaKnown RBP23.52■■□□□ 1.36
PDLIM2-216ENST00000464275 TXNP10599 105 aaKnown RBP23.52■■□□□ 1.36
PDLIM2-216ENST00000464275 TCP1P17987 556 aaKnown RBP23.52■■□□□ 1.36
PDLIM2-216ENST00000464275 SCFD2Q8WU76 684 aa23.52■■□□□ 1.36
PDLIM2-216ENST00000464275 SYT11Q9BT88 431 aa23.52■■□□□ 1.36
PDLIM2-216ENST00000464275 ACBD3Q9H3P7 528 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms