RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 VN1R3Q9BXE9 311 aa15.95■□□□□ 0.14
SNRNP40-203ENST00000463988 EIF2AQ9BY44 585 aaKnown RBP15.95■□□□□ 0.14
SNRNP40-203ENST00000463988 FAN1Q9Y2M0 1017 aa15.95■□□□□ 0.14
SNRNP40-203ENST00000463988 NR2E1Q9Y466 385 aa15.95■□□□□ 0.14
SNRNP40-203ENST00000463988 ZDBF2Q9HCK1 2354 aa15.94■□□□□ 0.14
SNRNP40-203ENST00000463988 POMCP01189 267 aa15.94■□□□□ 0.14
SNRNP40-203ENST00000463988 ARF4P18085 180 aaPredicted RBP15.94■□□□□ 0.14
SNRNP40-203ENST00000463988 ATP2B1P20020 1258 aa15.94■□□□□ 0.14
SNRNP40-203ENST00000463988 MUTP22033 750 aa15.94■□□□□ 0.14
SNRNP40-203ENST00000463988 RPA1P27694 616 aa15.94■□□□□ 0.14
SNRNP40-203ENST00000463988 CA8P35219 290 aa15.94■□□□□ 0.14
SNRNP40-203ENST00000463988 MTHFRP42898 656 aa15.94■□□□□ 0.14
SNRNP40-203ENST00000463988 TRAPPC10P48553 1259 aa15.94■□□□□ 0.14
SNRNP40-203ENST00000463988 GUCY1B3Q02153 619 aa15.94■□□□□ 0.14
SNRNP40-203ENST00000463988 AUTS2Q8WXX7 1259 aa15.94■□□□□ 0.14
SNRNP40-203ENST00000463988 RIPOR3Q96MK2 946 aa15.94■□□□□ 0.14
SNRNP40-203ENST00000463988 APOL5Q9BWW9 433 aa15.94■□□□□ 0.14
SNRNP40-203ENST00000463988 EMILIN2Q9BXX0 1053 aa15.94■□□□□ 0.14
SNRNP40-203ENST00000463988 POLR3FQ9H1D9 316 aaPredicted RBP15.94■□□□□ 0.14
SNRNP40-203ENST00000463988 RNF39Q9H2S5 420 aa15.94■□□□□ 0.14
SNRNP40-203ENST00000463988 DAXXQ9UER7 740 aaPredicted RBP15.94■□□□□ 0.14
SNRNP40-203ENST00000463988 GIT1Q9Y2X7 761 aa15.94■□□□□ 0.14
SNRNP40-203ENST00000463988 ZMYM2Q9UBW7 1377 aa15.94■□□□□ 0.14
SNRNP40-203ENST00000463988 A0A1B0GUA9 196 aa15.93■□□□□ 0.14
SNRNP40-203ENST00000463988 ARL5CA6NH57 179 aa15.93■□□□□ 0.14
SNRNP40-203ENST00000463988 NRP1O14786 923 aa15.93■□□□□ 0.14
SNRNP40-203ENST00000463988 USO1O60763 962 aaKnown RBP15.93■□□□□ 0.14
SNRNP40-203ENST00000463988 LILRB3O75022 631 aa15.93■□□□□ 0.14
SNRNP40-203ENST00000463988 MED24O75448 989 aa15.93■□□□□ 0.14
SNRNP40-203ENST00000463988 OR52Z1P0C646 297 aa15.93■□□□□ 0.14
SNRNP40-203ENST00000463988 HOXD11P31277 338 aaPredicted RBP15.93■□□□□ 0.14
SNRNP40-203ENST00000463988 DSC1Q08554 894 aa15.93■□□□□ 0.14
SNRNP40-203ENST00000463988 SLC27A1Q6PCB7 646 aa15.93■□□□□ 0.14
SNRNP40-203ENST00000463988 PPP4R3CPQ6ZMV5 832 aa15.93■□□□□ 0.14
SNRNP40-203ENST00000463988 NOSTRINQ8IVI9 506 aa15.93■□□□□ 0.14
SNRNP40-203ENST00000463988 COLGALT2Q8IYK4 626 aa15.93■□□□□ 0.14
SNRNP40-203ENST00000463988 CPB2Q96IY4 423 aa15.93■□□□□ 0.14
SNRNP40-203ENST00000463988 PRIMPOLQ96LW4 560 aa15.93■□□□□ 0.14
SNRNP40-203ENST00000463988 GAD1Q99259 594 aa15.93■□□□□ 0.14
SNRNP40-203ENST00000463988 TRIM6Q9C030 488 aaPredicted RBP15.93■□□□□ 0.14
SNRNP40-203ENST00000463988 SSX2IPQ9Y2D8 614 aa15.93■□□□□ 0.14
SNRNP40-203ENST00000463988 A0A087WWV3 80 aa15.92■□□□□ 0.14
SNRNP40-203ENST00000463988 TMEM221A6NGB7 291 aa15.92■□□□□ 0.14
SNRNP40-203ENST00000463988 M0R296 226 aa15.92■□□□□ 0.14
SNRNP40-203ENST00000463988 EFEMP2O95967 443 aa15.92■□□□□ 0.14
SNRNP40-203ENST00000463988 SOD2P04179 222 aa15.92■□□□□ 0.14
SNRNP40-203ENST00000463988 EPCAMP16422 314 aa15.92■□□□□ 0.14
SNRNP40-203ENST00000463988 SIGLEC14Q08ET2 396 aa15.92■□□□□ 0.14
SNRNP40-203ENST00000463988 ZNF174Q15697 407 aa15.92■□□□□ 0.14
SNRNP40-203ENST00000463988 PTPN21Q16825 1174 aa15.92■□□□□ 0.14
SNRNP40-203ENST00000463988 FAM187BQ17R55 369 aa15.92■□□□□ 0.14
SNRNP40-203ENST00000463988 TTC38Q5R3I4 469 aa15.92■□□□□ 0.14
SNRNP40-203ENST00000463988 ATAT1Q5SQI0 421 aa15.92■□□□□ 0.14
SNRNP40-203ENST00000463988 CDCA2Q69YH5 1023 aaPredicted RBP15.92■□□□□ 0.14
SNRNP40-203ENST00000463988 KIAA1841Q6NSI8 718 aa15.92■□□□□ 0.14
SNRNP40-203ENST00000463988 FAM184AQ8NB25 1140 aa15.92■□□□□ 0.14
SNRNP40-203ENST00000463988 KLHL5Q96PQ7 755 aa15.92■□□□□ 0.14
SNRNP40-203ENST00000463988 KIF2CQ99661 725 aa15.92■□□□□ 0.14
SNRNP40-203ENST00000463988 FZD8Q9H461 694 aa15.92■□□□□ 0.14
SNRNP40-203ENST00000463988 POMKQ9H5K3 350 aa15.92■□□□□ 0.14
SNRNP40-203ENST00000463988 MRPL17Q9NRX2 175 aaKnown RBP15.92■□□□□ 0.14
SNRNP40-203ENST00000463988 HES2Q9Y543 173 aa15.92■□□□□ 0.14
SNRNP40-203ENST00000463988 B4GALT5O43286 388 aa15.91■□□□□ 0.14
SNRNP40-203ENST00000463988 NR1I2O75469 434 aa15.91■□□□□ 0.14
SNRNP40-203ENST00000463988 CENPBP07199 599 aaPredicted RBP15.91■□□□□ 0.14
SNRNP40-203ENST00000463988 CNPP09543 421 aaKnown RBP15.91■□□□□ 0.14
SNRNP40-203ENST00000463988 CYP11B2P19099 503 aa15.91■□□□□ 0.14
SNRNP40-203ENST00000463988 MLH1P40692 756 aa15.91■□□□□ 0.14
SNRNP40-203ENST00000463988 GNL2Q13823 731 aaKnown RBP15.91■□□□□ 0.14
SNRNP40-203ENST00000463988 RARS2Q5T160 578 aaKnown RBP15.91■□□□□ 0.14
SNRNP40-203ENST00000463988 CABP7Q86V35 215 aa15.91■□□□□ 0.14
SNRNP40-203ENST00000463988 ZBTB8OSQ8IWT0 167 aa15.91■□□□□ 0.14
SNRNP40-203ENST00000463988 GPR65Q8IYL9 337 aa15.91■□□□□ 0.14
SNRNP40-203ENST00000463988 RNF168Q8IYW5 571 aaPredicted RBP15.91■□□□□ 0.14
SNRNP40-203ENST00000463988 HERC2P3Q9BVR0 1158 aa15.91■□□□□ 0.14
SNRNP40-203ENST00000463988 C2orf40Q9H1Z8 148 aa15.91■□□□□ 0.14
SNRNP40-203ENST00000463988 GPRC5CQ9NQ84 441 aa15.91■□□□□ 0.14
SNRNP40-203ENST00000463988 PRMT7Q9NVM4 692 aaPredicted RBP15.91■□□□□ 0.14
SNRNP40-203ENST00000463988 MARCH5Q9NX47 278 aa15.91■□□□□ 0.14
SNRNP40-203ENST00000463988 NOL7Q9UMY1 257 aaKnown RBP15.91■□□□□ 0.14
SNRNP40-203ENST00000463988 USTQ9Y2C2 406 aa15.91■□□□□ 0.14
SNRNP40-203ENST00000463988 LRRIQ4A6NIV6 560 aa15.9■□□□□ 0.14
SNRNP40-203ENST00000463988 C1RP00736 705 aa15.9■□□□□ 0.14
SNRNP40-203ENST00000463988 URODP06132 367 aa15.9■□□□□ 0.14
SNRNP40-203ENST00000463988 U2AF2P26368 475 aaKnown RBP eCLIP15.9■□□□□ 0.14
SNRNP40-203ENST00000463988 KLRC2P26717 231 aa15.9■□□□□ 0.14
SNRNP40-203ENST00000463988 OR1G1P47890 313 aa15.9■□□□□ 0.14
SNRNP40-203ENST00000463988 FXR2P51116 673 aaKnown RBP eCLIP15.9■□□□□ 0.14
SNRNP40-203ENST00000463988 SCNN1GP51170 649 aa15.9■□□□□ 0.14
SNRNP40-203ENST00000463988 CLCN4P51793 760 aa15.9■□□□□ 0.14
SNRNP40-203ENST00000463988 PDIA5Q14554 519 aa15.9■□□□□ 0.14
SNRNP40-203ENST00000463988 HAUS3Q68CZ6 603 aa15.9■□□□□ 0.14
SNRNP40-203ENST00000463988 POTEGQ6S5H5 508 aa15.9■□□□□ 0.14
SNRNP40-203ENST00000463988 PADI6Q6TGC4 694 aa15.9■□□□□ 0.14
SNRNP40-203ENST00000463988 C12orf76Q8N812 135 aaPredicted RBP15.9■□□□□ 0.14
SNRNP40-203ENST00000463988 C4orf32Q8N8J7 132 aa15.9■□□□□ 0.14
SNRNP40-203ENST00000463988 GSTCDQ8NEC7 633 aa15.9■□□□□ 0.14
SNRNP40-203ENST00000463988 PBXIP1Q96AQ6 731 aa15.9■□□□□ 0.14
SNRNP40-203ENST00000463988 FBXL18Q96ME1 805 aa15.9■□□□□ 0.14
SNRNP40-203ENST00000463988 ZFP42Q96MM3 310 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms