RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 EP400NLQ6ZTU2 488 aa14.32□□□□□ -0.12
XRN1-203ENST00000463916 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.32□□□□□ -0.12
XRN1-203ENST00000463916 MICAL1Q8TDZ2 1067 aa14.32□□□□□ -0.12
XRN1-203ENST00000463916 ADAMTS19Q8TE59 1207 aa14.32□□□□□ -0.12
XRN1-203ENST00000463916 MRPS27Q92552 414 aaKnown RBP14.32□□□□□ -0.12
XRN1-203ENST00000463916 IFT74Q96LB3 600 aa14.32□□□□□ -0.12
XRN1-203ENST00000463916 PRIMPOLQ96LW4 560 aa14.32□□□□□ -0.12
XRN1-203ENST00000463916 USP28Q96RU2 1077 aa14.32□□□□□ -0.12
XRN1-203ENST00000463916 GAD1Q99259 594 aa14.32□□□□□ -0.12
XRN1-203ENST00000463916 APOL6Q9BWW8 343 aa14.32□□□□□ -0.12
XRN1-203ENST00000463916 GBP3Q9H0R5 595 aa14.32□□□□□ -0.12
XRN1-203ENST00000463916 C2orf40Q9H1Z8 148 aa14.32□□□□□ -0.12
XRN1-203ENST00000463916 PDZD7Q9H5P4 517 aa14.32□□□□□ -0.12
XRN1-203ENST00000463916 CLDND1Q9NY35 253 aa14.32□□□□□ -0.12
XRN1-203ENST00000463916 CNTNAP2Q9UHC6 1331 aa14.32□□□□□ -0.12
XRN1-203ENST00000463916 NPHP3-ACAD11A0A0J9YXS1 232 aa14.32□□□□□ -0.12
XRN1-203ENST00000463916 ARL5CA6NH57 179 aa14.32□□□□□ -0.12
XRN1-203ENST00000463916 PER2O15055 1255 aa14.32□□□□□ -0.12
XRN1-203ENST00000463916 PRKCBP05771 671 aa14.32□□□□□ -0.12
XRN1-203ENST00000463916 GALTP07902 379 aa14.32□□□□□ -0.12
XRN1-203ENST00000463916 PLA2G4BP0C869 781 aa14.32□□□□□ -0.12
XRN1-203ENST00000463916 MLH1P40692 756 aa14.32□□□□□ -0.12
XRN1-203ENST00000463916 UBA7P41226 1012 aa14.32□□□□□ -0.12
XRN1-203ENST00000463916 RBM10P98175 930 aaKnown RBP14.32□□□□□ -0.12
XRN1-203ENST00000463916 RNASELQ05823 741 aaKnown RBP14.32□□□□□ -0.12
XRN1-203ENST00000463916 PRPF4BQ13523 1007 aaKnown RBP14.32□□□□□ -0.12
XRN1-203ENST00000463916 KARSQ15046 597 aaKnown RBP14.32□□□□□ -0.12
XRN1-203ENST00000463916 PPP2R5AQ15172 486 aa14.32□□□□□ -0.12
XRN1-203ENST00000463916 MAPK6Q16659 721 aa14.32□□□□□ -0.12
XRN1-203ENST00000463916 HSCBQ8IWL3 235 aa14.32□□□□□ -0.12
XRN1-203ENST00000463916 CNNM3Q8NE01 707 aa14.32□□□□□ -0.12
XRN1-203ENST00000463916 GSTCDQ8NEC7 633 aa14.32□□□□□ -0.12
XRN1-203ENST00000463916 SYMPKQ92797 1274 aaKnown RBP14.32□□□□□ -0.12
XRN1-203ENST00000463916 EPSTI1Q96J88 318 aa14.32□□□□□ -0.12
XRN1-203ENST00000463916 TRIM6Q9C030 488 aaPredicted RBP14.32□□□□□ -0.12
XRN1-203ENST00000463916 NT5C3AQ9H0P0 336 aa14.32□□□□□ -0.12
XRN1-203ENST00000463916 BLOC1S4Q9NUP1 217 aa14.32□□□□□ -0.12
XRN1-203ENST00000463916 FBXO2Q9UK22 296 aaPredicted RBP14.32□□□□□ -0.12
XRN1-203ENST00000463916 LZTS1Q9Y250 596 aa14.32□□□□□ -0.12
XRN1-203ENST00000463916 HIDE1A8MVS5 230 aa14.31□□□□□ -0.12
XRN1-203ENST00000463916 ACKR2O00590 384 aa14.31□□□□□ -0.12
XRN1-203ENST00000463916 FSCN2O14926 492 aa14.31□□□□□ -0.12
XRN1-203ENST00000463916 GUCY2CP25092 1073 aa14.31□□□□□ -0.12
XRN1-203ENST00000463916 LONP1P36776 959 aaKnown RBP14.31□□□□□ -0.12
XRN1-203ENST00000463916 NRIP1P48552 1158 aa14.31□□□□□ -0.12
XRN1-203ENST00000463916 SLC11A1P49279 550 aa14.31□□□□□ -0.12
XRN1-203ENST00000463916 NT5DC1Q5TFE4 455 aa14.31□□□□□ -0.12
XRN1-203ENST00000463916 EEF1DP3Q658K8 133 aa14.31□□□□□ -0.12
XRN1-203ENST00000463916 TAS1R3Q7RTX0 852 aa14.31□□□□□ -0.12
XRN1-203ENST00000463916 SPRYD3Q8NCJ5 442 aa14.31□□□□□ -0.12
XRN1-203ENST00000463916 CDK5RAP3Q96JB5 506 aa14.31□□□□□ -0.12
XRN1-203ENST00000463916 CLIC6Q96NY7 704 aa14.31□□□□□ -0.12
XRN1-203ENST00000463916 CXCL16Q9H2A7 254 aa14.31□□□□□ -0.12
XRN1-203ENST00000463916 CCDC169A6NNP5 214 aa14.3□□□□□ -0.12
XRN1-203ENST00000463916 PPM1AP35813 382 aa14.3□□□□□ -0.12
XRN1-203ENST00000463916 CACNB1Q02641 598 aaPredicted RBP14.3□□□□□ -0.12
XRN1-203ENST00000463916 ADAM15Q13444 863 aa14.3□□□□□ -0.12
XRN1-203ENST00000463916 LEXMQ3ZCV2 418 aa14.3□□□□□ -0.12
XRN1-203ENST00000463916 FOXD4L5Q5VV16 416 aaPredicted RBP14.3□□□□□ -0.12
XRN1-203ENST00000463916 PLPP4Q5VZY2 271 aa14.3□□□□□ -0.12
XRN1-203ENST00000463916 URGCPQ8TCY9 931 aa14.3□□□□□ -0.12
XRN1-203ENST00000463916 FOXD4L4Q8WXT5 416 aaPredicted RBP14.3□□□□□ -0.12
XRN1-203ENST00000463916 RSPH1Q8WYR4 309 aa14.3□□□□□ -0.12
XRN1-203ENST00000463916 TCF25Q9BQ70 676 aa14.3□□□□□ -0.12
XRN1-203ENST00000463916 VN1R3Q9BXE9 311 aa14.3□□□□□ -0.12
XRN1-203ENST00000463916 KLK14Q9P0G3 267 aa14.3□□□□□ -0.12
XRN1-203ENST00000463916 INPPL1O15357 1258 aa14.3□□□□□ -0.12
XRN1-203ENST00000463916 TBX10O75333 385 aa14.3□□□□□ -0.12
XRN1-203ENST00000463916 PLCG1P19174 1290 aa14.3□□□□□ -0.12
XRN1-203ENST00000463916 SCNN1GP51170 649 aa14.3□□□□□ -0.12
XRN1-203ENST00000463916 EFNA5P52803 228 aa14.3□□□□□ -0.12
XRN1-203ENST00000463916 KRT17Q04695 432 aa14.3□□□□□ -0.12
XRN1-203ENST00000463916 PKP1Q13835 747 aa14.3□□□□□ -0.12
XRN1-203ENST00000463916 DHX8Q14562 1220 aaKnown RBP14.3□□□□□ -0.12
XRN1-203ENST00000463916 KCTD17Q8N5Z5 321 aa14.3□□□□□ -0.12
XRN1-203ENST00000463916 IGSF21Q96ID5 467 aa14.3□□□□□ -0.12
XRN1-203ENST00000463916 DRC1Q96MC2 740 aa14.3□□□□□ -0.12
XRN1-203ENST00000463916 ZSCAN16Q9H4T2 348 aaPredicted RBP14.3□□□□□ -0.12
XRN1-203ENST00000463916 TLE6Q9H808 572 aa14.3□□□□□ -0.12
XRN1-203ENST00000463916 UBN1Q9NPG3 1134 aa14.3□□□□□ -0.12
XRN1-203ENST00000463916 ARHGAP28Q9P2N2 729 aa14.3□□□□□ -0.12
XRN1-203ENST00000463916 PUF60Q9UHX1 559 aaKnown RBP14.3□□□□□ -0.12
XRN1-203ENST00000463916 SRPRBQ9Y5M8 271 aaKnown RBP14.3□□□□□ -0.12
XRN1-203ENST00000463916 NCOR1O75376 2440 aa14.3□□□□□ -0.12
XRN1-203ENST00000463916 K7ERI5 159 aa14.29□□□□□ -0.12
XRN1-203ENST00000463916 GLP2RO95838 553 aa14.29□□□□□ -0.12
XRN1-203ENST00000463916 CLUL1Q15846 466 aa14.29□□□□□ -0.12
XRN1-203ENST00000463916 VN1R2Q8NFZ6 395 aa14.29□□□□□ -0.12
XRN1-203ENST00000463916 CALML4Q96GE6 196 aa14.29□□□□□ -0.12
XRN1-203ENST00000463916 UHRF1Q96T88 793 aaPredicted RBP14.29□□□□□ -0.12
XRN1-203ENST00000463916 NTPCRQ9BSD7 190 aaKnown RBP14.29□□□□□ -0.12
XRN1-203ENST00000463916 ENTPD7Q9NQZ7 604 aa14.29□□□□□ -0.12
XRN1-203ENST00000463916 KANSL3Q9P2N6 904 aa14.29□□□□□ -0.12
XRN1-203ENST00000463916 GIT1Q9Y2X7 761 aa14.29□□□□□ -0.12
XRN1-203ENST00000463916 F8W810 466 aa14.29□□□□□ -0.12
XRN1-203ENST00000463916 SLC16A4O15374 487 aa14.29□□□□□ -0.12
XRN1-203ENST00000463916 DMP1Q13316 513 aaPredicted RBP14.29□□□□□ -0.12
XRN1-203ENST00000463916 MCM6Q14566 821 aa14.29□□□□□ -0.12
XRN1-203ENST00000463916 SLC39A14Q15043 492 aa14.29□□□□□ -0.12
XRN1-203ENST00000463916 TMC7Q7Z402 723 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 210.1 ms