RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 IGKV6-21A0A0C4DH24 114 aa8.72□□□□□ -1.01
SMC3-202ENST00000462899 IPO5O00410 1097 aaKnown RBP8.72□□□□□ -1.01
SMC3-202ENST00000462899 INPPL1O15357 1258 aa8.72□□□□□ -1.01
SMC3-202ENST00000462899 CSDE1O75534 798 aaKnown RBP8.72□□□□□ -1.01
SMC3-202ENST00000462899 RFPL2O75678 378 aa8.72□□□□□ -1.01
SMC3-202ENST00000462899 DDHD2O94830 711 aa8.72□□□□□ -1.01
SMC3-202ENST00000462899 C1RP00736 705 aa8.72□□□□□ -1.01
SMC3-202ENST00000462899 FOSP01100 380 aaPredicted RBP8.72□□□□□ -1.01
SMC3-202ENST00000462899 SOD2P04179 222 aa8.72□□□□□ -1.01
SMC3-202ENST00000462899 CYP3A4P08684 503 aa8.72□□□□□ -1.01
SMC3-202ENST00000462899 LAMP2P13473 410 aa8.72□□□□□ -1.01
SMC3-202ENST00000462899 PRKCSHP14314 528 aaPredicted RBP8.72□□□□□ -1.01
SMC3-202ENST00000462899 SDHBP21912 280 aa8.72□□□□□ -1.01
SMC3-202ENST00000462899 KLRC2P26717 231 aa8.72□□□□□ -1.01
SMC3-202ENST00000462899 LIFRP42702 1097 aa8.72□□□□□ -1.01
SMC3-202ENST00000462899 AFF1P51825 1210 aaKnown RBP8.72□□□□□ -1.01
SMC3-202ENST00000462899 AP3B2Q13367 1082 aa8.72□□□□□ -1.01
SMC3-202ENST00000462899 DRP2Q13474 957 aa8.72□□□□□ -1.01
SMC3-202ENST00000462899 NONOQ15233 471 aaKnown RBP eCLIP8.72□□□□□ -1.01
SMC3-202ENST00000462899 TARBP2Q15633 366 aaKnown RBP8.72□□□□□ -1.01
SMC3-202ENST00000462899 NOMO2Q5JPE7 1267 aa8.72□□□□□ -1.01
SMC3-202ENST00000462899 KIAA0319Q5VV43 1072 aa8.72□□□□□ -1.01
SMC3-202ENST00000462899 DCLRE1AQ6PJP8 1040 aa8.72□□□□□ -1.01
SMC3-202ENST00000462899 HEATR3Q7Z4Q2 680 aa8.72□□□□□ -1.01
SMC3-202ENST00000462899 SMAP1Q8IYB5 467 aaPredicted RBP8.72□□□□□ -1.01
SMC3-202ENST00000462899 GPR161Q8N6U8 529 aaKnown RBP8.72□□□□□ -1.01
SMC3-202ENST00000462899 RDH13Q8NBN7 331 aa8.72□□□□□ -1.01
SMC3-202ENST00000462899 STAMQ92783 540 aa8.72□□□□□ -1.01
SMC3-202ENST00000462899 LENG9Q96B70 501 aa8.72□□□□□ -1.01
SMC3-202ENST00000462899 ZNF668Q96K58 619 aaPredicted RBP8.72□□□□□ -1.01
SMC3-202ENST00000462899 RPS6KC1Q96S38 1066 aa8.72□□□□□ -1.01
SMC3-202ENST00000462899 MAP7D2Q96T17 732 aa8.72□□□□□ -1.01
SMC3-202ENST00000462899 RTKNQ9BST9 563 aa8.72□□□□□ -1.01
SMC3-202ENST00000462899 HERC2P3Q9BVR0 1158 aa8.72□□□□□ -1.01
SMC3-202ENST00000462899 REPIN1Q9BWE0 567 aaKnown RBP8.72□□□□□ -1.01
SMC3-202ENST00000462899 EMILIN2Q9BXX0 1053 aa8.72□□□□□ -1.01
SMC3-202ENST00000462899 RXFP1Q9HBX9 757 aa8.72□□□□□ -1.01
SMC3-202ENST00000462899 PARD6AQ9NPB6 346 aa8.72□□□□□ -1.01
SMC3-202ENST00000462899 FAM105AQ9NUU6 356 aa8.72□□□□□ -1.01
SMC3-202ENST00000462899 DAXXQ9UER7 740 aaPredicted RBP8.72□□□□□ -1.01
SMC3-202ENST00000462899 PCDHGA2Q9Y5H1 932 aa8.72□□□□□ -1.01
SMC3-202ENST00000462899 NUMBLQ9Y6R0 609 aa8.72□□□□□ -1.01
SMC3-202ENST00000462899 DSPP15924 2871 aaKnown RBP8.72□□□□□ -1.01
SMC3-202ENST00000462899 PDCD11Q14690 1871 aaKnown RBP8.72□□□□□ -1.01
SMC3-202ENST00000462899 AKAP13Q12802 2813 aa8.72□□□□□ -1.01
SMC3-202ENST00000462899 CCDC195A0A1B0GUA6 201 aa8.71□□□□□ -1.02
SMC3-202ENST00000462899 SHISA7A6NL88 538 aa8.71□□□□□ -1.02
SMC3-202ENST00000462899 PRR5-ARHGAP8B1AHC4 643 aa8.71□□□□□ -1.02
SMC3-202ENST00000462899 TRIM66O15016 1216 aa8.71□□□□□ -1.02
SMC3-202ENST00000462899 ADAMTS3O15072 1205 aa8.71□□□□□ -1.02
SMC3-202ENST00000462899 TEX28O15482 410 aa8.71□□□□□ -1.02
SMC3-202ENST00000462899 EDIL3O43854 480 aa8.71□□□□□ -1.02
SMC3-202ENST00000462899 TDGF1P13385 188 aa8.71□□□□□ -1.02
SMC3-202ENST00000462899 TMOD1P28289 359 aa8.71□□□□□ -1.02
SMC3-202ENST00000462899 GBP2P32456 591 aaPredicted RBP8.71□□□□□ -1.02
SMC3-202ENST00000462899 ARHGAP8P85298 464 aa8.71□□□□□ -1.02
SMC3-202ENST00000462899 LMNB2Q03252 620 aa8.71□□□□□ -1.02
SMC3-202ENST00000462899 UGCGQ16739 394 aa8.71□□□□□ -1.02
SMC3-202ENST00000462899 GLB1LQ6UWU2 654 aa8.71□□□□□ -1.02
SMC3-202ENST00000462899 AGMOQ6ZNB7 445 aa8.71□□□□□ -1.02
SMC3-202ENST00000462899 SGMS1Q86VZ5 419 aa8.71□□□□□ -1.02
SMC3-202ENST00000462899 PLA2G4DQ86XP0 818 aa8.71□□□□□ -1.02
SMC3-202ENST00000462899 HDAC7Q8WUI4 952 aa8.71□□□□□ -1.02
SMC3-202ENST00000462899 MAP4K1Q92918 833 aa8.71□□□□□ -1.02
SMC3-202ENST00000462899 FAM167AQ96KS9 214 aa8.71□□□□□ -1.02
SMC3-202ENST00000462899 TMEM175Q9BSA9 504 aa8.71□□□□□ -1.02
SMC3-202ENST00000462899 RPP25Q9BUL9 199 aaKnown RBP8.71□□□□□ -1.02
SMC3-202ENST00000462899 OSBPL6Q9BZF3 934 aa8.71□□□□□ -1.02
SMC3-202ENST00000462899 PRMT8Q9NR22 394 aaPredicted RBP8.71□□□□□ -1.02
SMC3-202ENST00000462899 TBC1D22BQ9NU19 505 aa8.71□□□□□ -1.02
SMC3-202ENST00000462899 GABBR1Q9UBS5 961 aa8.71□□□□□ -1.02
SMC3-202ENST00000462899 SMG5Q9UPR3 1016 aaKnown RBP8.71□□□□□ -1.02
SMC3-202ENST00000462899 MTF2Q9Y483 593 aaPredicted RBP8.71□□□□□ -1.02
SMC3-202ENST00000462899 PCDHA10Q9Y5I2 948 aa8.71□□□□□ -1.02
SMC3-202ENST00000462899 TICRRQ7Z2Z1 1910 aa8.71□□□□□ -1.02
SMC3-202ENST00000462899 ITPR1Q14643 2758 aa8.71□□□□□ -1.02
SMC3-202ENST00000462899 PKD1L2Q7Z442 2459 aa8.71□□□□□ -1.02
SMC3-202ENST00000462899 KANSL1LA0AUZ9 987 aa8.7□□□□□ -1.02
SMC3-202ENST00000462899 DCDC2BA2VCK2 349 aa8.7□□□□□ -1.02
SMC3-202ENST00000462899 hCG_1984214I3L0E3 225 aa8.7□□□□□ -1.02
SMC3-202ENST00000462899 NRP1O14786 923 aa8.7□□□□□ -1.02
SMC3-202ENST00000462899 SGSM2O43147 1006 aa8.7□□□□□ -1.02
SMC3-202ENST00000462899 PRC1O43663 620 aa8.7□□□□□ -1.02
SMC3-202ENST00000462899 STBD1O95210 358 aa8.7□□□□□ -1.02
SMC3-202ENST00000462899 GLUD1P00367 558 aa8.7□□□□□ -1.02
SMC3-202ENST00000462899 IGHDP01880 384 aa8.7□□□□□ -1.02
SMC3-202ENST00000462899 SSBP05455 408 aaKnown RBP eCLIP8.7□□□□□ -1.02
SMC3-202ENST00000462899 PSAPP07602 524 aa8.7□□□□□ -1.02
SMC3-202ENST00000462899 CALM1P0DP23 149 aa8.7□□□□□ -1.02
SMC3-202ENST00000462899 CALM2P0DP24 149 aa8.7□□□□□ -1.02
SMC3-202ENST00000462899 CALM3P0DP25 149 aa8.7□□□□□ -1.02
SMC3-202ENST00000462899 RAB27AP51159 221 aa8.7□□□□□ -1.02
SMC3-202ENST00000462899 ADCY7P51828 1080 aa8.7□□□□□ -1.02
SMC3-202ENST00000462899 SETQ01105 290 aaPredicted RBP8.7□□□□□ -1.02
SMC3-202ENST00000462899 PRKCEQ02156 737 aa8.7□□□□□ -1.02
SMC3-202ENST00000462899 FZD5Q13467 585 aa8.7□□□□□ -1.02
SMC3-202ENST00000462899 B4GALNT3Q6L9W6 998 aa8.7□□□□□ -1.02
SMC3-202ENST00000462899 LILRA6Q6PI73 481 aa8.7□□□□□ -1.02
SMC3-202ENST00000462899 TAS1R1Q7RTX1 841 aa8.7□□□□□ -1.02
SMC3-202ENST00000462899 MRPL10Q7Z7H8 261 aaKnown RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms