RNA–Protein interactions for RNA: ENST00000462475.1

COL7A1-204, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 305 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-204ENST00000462475 PPFIBP1Q86W92 1011 aa17.93■□□□□ 0.46
COL7A1-204ENST00000462475 ZDHHC14Q8IZN3 488 aa17.93■□□□□ 0.46
COL7A1-204ENST00000462475 GTF3C6Q969F1 213 aa17.93■□□□□ 0.46
COL7A1-204ENST00000462475 HSD17B14Q9BPX1 270 aa17.93■□□□□ 0.46
COL7A1-204ENST00000462475 EMILIN2Q9BXX0 1053 aa17.93■□□□□ 0.46
COL7A1-204ENST00000462475 BRMS1Q9HCU9 246 aa17.93■□□□□ 0.46
COL7A1-204ENST00000462475 FAM86C1Q9NVL1 165 aa17.93■□□□□ 0.46
COL7A1-204ENST00000462475 DMDP11532 3685 aa17.93■□□□□ 0.46
COL7A1-204ENST00000462475 CACNA1HO95180 2353 aa17.93■□□□□ 0.46
COL7A1-204ENST00000462475 ARL5CA6NH57 179 aa17.92■□□□□ 0.46
COL7A1-204ENST00000462475 INO80B-WBP1J3KQ70 363 aa17.92■□□□□ 0.46
COL7A1-204ENST00000462475 C2CD2LO14523 706 aa17.92■□□□□ 0.46
COL7A1-204ENST00000462475 LYPLA2O95372 231 aa17.92■□□□□ 0.46
COL7A1-204ENST00000462475 SOD2P04179 222 aa17.92■□□□□ 0.46
COL7A1-204ENST00000462475 ALDH2P05091 517 aa17.92■□□□□ 0.46
COL7A1-204ENST00000462475 KLRC2P26717 231 aa17.92■□□□□ 0.46
COL7A1-204ENST00000462475 MBTD1Q05BQ5 628 aa17.92■□□□□ 0.46
COL7A1-204ENST00000462475 MXD4Q14582 209 aaPredicted RBP17.92■□□□□ 0.46
COL7A1-204ENST00000462475 ANKRD1Q15327 319 aa17.92■□□□□ 0.46
COL7A1-204ENST00000462475 CALCRLQ16602 461 aa17.92■□□□□ 0.46
COL7A1-204ENST00000462475 AMHR2Q16671 573 aa17.92■□□□□ 0.46
COL7A1-204ENST00000462475 NOTUMQ6P988 496 aa17.92■□□□□ 0.46
COL7A1-204ENST00000462475 GPR149Q86SP6 731 aa17.92■□□□□ 0.46
COL7A1-204ENST00000462475 IFNLR1Q8IU57 520 aaPredicted RBP17.92■□□□□ 0.46
COL7A1-204ENST00000462475 COLGALT2Q8IYK4 626 aa17.92■□□□□ 0.46
COL7A1-204ENST00000462475 CNNM3Q8NE01 707 aa17.92■□□□□ 0.46
COL7A1-204ENST00000462475 NSUN7Q8NE18 718 aaKnown RBP17.92■□□□□ 0.46
COL7A1-204ENST00000462475 CCDC51Q96ER9 411 aa17.92■□□□□ 0.46
COL7A1-204ENST00000462475 ZFP42Q96MM3 310 aa17.92■□□□□ 0.46
COL7A1-204ENST00000462475 GAD1Q99259 594 aa17.92■□□□□ 0.46
COL7A1-204ENST00000462475 HERC2P3Q9BVR0 1158 aa17.92■□□□□ 0.46
COL7A1-204ENST00000462475 MRPL17Q9NRX2 175 aaKnown RBP17.92■□□□□ 0.46
COL7A1-204ENST00000462475 STK39Q9UEW8 545 aa17.92■□□□□ 0.46
COL7A1-204ENST00000462475 LIMD1Q9UGP4 676 aa17.92■□□□□ 0.46
COL7A1-204ENST00000462475 PCDHA12Q9UN75 941 aa17.92■□□□□ 0.46
COL7A1-204ENST00000462475 USTQ9Y2C2 406 aa17.92■□□□□ 0.46
COL7A1-204ENST00000462475 SPDYE4A6NLX3 237 aa17.91■□□□□ 0.46
COL7A1-204ENST00000462475 BTBD18B2RXH4 712 aa17.91■□□□□ 0.46
COL7A1-204ENST00000462475 F8W810 466 aa17.91■□□□□ 0.46
COL7A1-204ENST00000462475 INPPL1O15357 1258 aa17.91■□□□□ 0.46
COL7A1-204ENST00000462475 JAK2O60674 1132 aa17.91■□□□□ 0.46
COL7A1-204ENST00000462475 URODP06132 367 aa17.91■□□□□ 0.46
COL7A1-204ENST00000462475 AXLP30530 894 aa17.91■□□□□ 0.46
COL7A1-204ENST00000462475 ARL2P36404 184 aa17.91■□□□□ 0.46
COL7A1-204ENST00000462475 OR1G1P47890 313 aa17.91■□□□□ 0.46
COL7A1-204ENST00000462475 SCNN1GP51170 649 aa17.91■□□□□ 0.46
COL7A1-204ENST00000462475 DSC1Q08554 894 aa17.91■□□□□ 0.46
COL7A1-204ENST00000462475 TFDP1Q14186 410 aa17.91■□□□□ 0.46
COL7A1-204ENST00000462475 PCBP1Q15365 356 aaKnown RBP eCLIP17.91■□□□□ 0.46
COL7A1-204ENST00000462475 TAS1R1Q7RTX1 841 aa17.91■□□□□ 0.46
COL7A1-204ENST00000462475 DIS3L2Q8IYB7 885 aaKnown RBP17.91■□□□□ 0.46
COL7A1-204ENST00000462475 RNF168Q8IYW5 571 aaPredicted RBP17.91■□□□□ 0.46
COL7A1-204ENST00000462475 APOL6Q9BWW8 343 aa17.91■□□□□ 0.46
COL7A1-204ENST00000462475 CSRNP2Q9H175 543 aa17.91■□□□□ 0.46
COL7A1-204ENST00000462475 TTC12Q9H892 705 aaPredicted RBP17.91■□□□□ 0.46
COL7A1-204ENST00000462475 UBN1Q9NPG3 1134 aa17.91■□□□□ 0.46
COL7A1-204ENST00000462475 ANKEF1Q9NU02 776 aa17.91■□□□□ 0.46
COL7A1-204ENST00000462475 MIOSQ9NXC5 875 aa17.91■□□□□ 0.46
COL7A1-204ENST00000462475 DENND4AQ7Z401 1863 aa17.9■□□□□ 0.46
COL7A1-204ENST00000462475 A0A087WWV3 80 aa17.9■□□□□ 0.46
COL7A1-204ENST00000462475 B4GALT5O43286 388 aa17.9■□□□□ 0.46
COL7A1-204ENST00000462475 NEMFO60524 1076 aa17.9■□□□□ 0.46
COL7A1-204ENST00000462475 DGAT1O75907 488 aa17.9■□□□□ 0.46
COL7A1-204ENST00000462475 EFEMP2O95967 443 aa17.9■□□□□ 0.46
COL7A1-204ENST00000462475 ARF4P18085 180 aaPredicted RBP17.9■□□□□ 0.46
COL7A1-204ENST00000462475 GLRA2P23416 452 aa17.9■□□□□ 0.46
COL7A1-204ENST00000462475 RARRES1P49788 294 aa17.9■□□□□ 0.46
COL7A1-204ENST00000462475 CCDC149Q6ZUS6 474 aa17.9■□□□□ 0.46
COL7A1-204ENST00000462475 PLCD3Q8N3E9 789 aa17.9■□□□□ 0.46
COL7A1-204ENST00000462475 RPS6KC1Q96S38 1066 aa17.9■□□□□ 0.46
COL7A1-204ENST00000462475 NXF3Q9H4D5 531 aaKnown RBP17.9■□□□□ 0.46
COL7A1-204ENST00000462475 MAN1C1Q9NR34 630 aa17.9■□□□□ 0.46
COL7A1-204ENST00000462475 POTEMA6NI47 508 aa17.89■□□□□ 0.45
COL7A1-204ENST00000462475 TEX28O15482 410 aa17.89■□□□□ 0.45
COL7A1-204ENST00000462475 TXKP42681 527 aa17.89■□□□□ 0.45
COL7A1-204ENST00000462475 POU5F1BQ06416 359 aa17.89■□□□□ 0.45
COL7A1-204ENST00000462475 CDR2LQ86X02 465 aaPredicted RBP17.89■□□□□ 0.45
COL7A1-204ENST00000462475 TMEM105Q8N8V8 129 aa17.89■□□□□ 0.45
COL7A1-204ENST00000462475 PIGOQ8TEQ8 1089 aa17.89■□□□□ 0.45
COL7A1-204ENST00000462475 CCDC43Q96MW1 224 aaKnown RBP17.89■□□□□ 0.45
COL7A1-204ENST00000462475 MTMR9Q96QG7 549 aa17.89■□□□□ 0.45
COL7A1-204ENST00000462475 POLR3FQ9H1D9 316 aaPredicted RBP17.89■□□□□ 0.45
COL7A1-204ENST00000462475 USO1O60763 962 aaKnown RBP17.88■□□□□ 0.45
COL7A1-204ENST00000462475 MYBP10242 640 aa17.88■□□□□ 0.45
COL7A1-204ENST00000462475 GLUD2P49448 558 aa17.88■□□□□ 0.45
COL7A1-204ENST00000462475 NCBP1Q09161 790 aaKnown RBP17.88■□□□□ 0.45
COL7A1-204ENST00000462475 ST3GAL1Q11201 340 aa17.88■□□□□ 0.45
COL7A1-204ENST00000462475 C15orf39Q6ZRI6 1047 aa17.88■□□□□ 0.45
COL7A1-204ENST00000462475 ACSF2Q96CM8 615 aaPredicted RBP17.88■□□□□ 0.45
COL7A1-204ENST00000462475 NFKBIZQ9BYH8 718 aa17.88■□□□□ 0.45
COL7A1-204ENST00000462475 TRIM6Q9C030 488 aaPredicted RBP17.88■□□□□ 0.45
COL7A1-204ENST00000462475 TMEM60Q9H2L4 133 aa17.88■□□□□ 0.45
COL7A1-204ENST00000462475 GPRC5CQ9NQ84 441 aa17.88■□□□□ 0.45
COL7A1-204ENST00000462475 GIT1Q9Y2X7 761 aa17.88■□□□□ 0.45
COL7A1-204ENST00000462475 H0Y858 1186 aa17.87■□□□□ 0.45
COL7A1-204ENST00000462475 GALR2O43603 387 aaPredicted RBP17.87■□□□□ 0.45
COL7A1-204ENST00000462475 NPTXRO95502 500 aa17.87■□□□□ 0.45
COL7A1-204ENST00000462475 ADH1AP07327 375 aa17.87■□□□□ 0.45
COL7A1-204ENST00000462475 AKAP5P24588 427 aa17.87■□□□□ 0.45
COL7A1-204ENST00000462475 KIAA0319Q5VV43 1072 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms