RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 MRPL9Q9BYD2 267 aaKnown RBP17.46■□□□□ 0.39
ERCC3-206ENST00000462306 RSAD1Q9HA92 442 aa17.46■□□□□ 0.39
ERCC3-206ENST00000462306 LARSQ9P2J5 1176 aaKnown RBP17.46■□□□□ 0.39
ERCC3-206ENST00000462306 KCNG1Q9UIX4 513 aa17.46■□□□□ 0.39
ERCC3-206ENST00000462306 PLAGL2Q9UPG8 496 aa17.46■□□□□ 0.39
ERCC3-206ENST00000462306 PHLPP2Q6ZVD8 1323 aa17.46■□□□□ 0.38
ERCC3-206ENST00000462306 N4BP3O15049 544 aa17.45■□□□□ 0.38
ERCC3-206ENST00000462306 ITGB1P05556 798 aa17.45■□□□□ 0.38
ERCC3-206ENST00000462306 ITGA4P13612 1032 aa17.45■□□□□ 0.38
ERCC3-206ENST00000462306 LAG3P18627 525 aa17.45■□□□□ 0.38
ERCC3-206ENST00000462306 ME1P48163 572 aa17.45■□□□□ 0.38
ERCC3-206ENST00000462306 AFF1P51825 1210 aaKnown RBP17.45■□□□□ 0.38
ERCC3-206ENST00000462306 CCDC85BQ15834 202 aaPredicted RBP17.45■□□□□ 0.38
ERCC3-206ENST00000462306 E2F4Q16254 413 aa17.45■□□□□ 0.38
ERCC3-206ENST00000462306 SPOUT1Q5T280 376 aaKnown RBP17.45■□□□□ 0.38
ERCC3-206ENST00000462306 EEF1DP3Q658K8 133 aa17.45■□□□□ 0.38
ERCC3-206ENST00000462306 PDILTQ8N807 584 aa17.45■□□□□ 0.38
ERCC3-206ENST00000462306 PPM1EQ8WY54 764 aa17.45■□□□□ 0.38
ERCC3-206ENST00000462306 KCNN1Q92952 543 aa17.45■□□□□ 0.38
ERCC3-206ENST00000462306 MRPL38Q96DV4 380 aaKnown RBP17.45■□□□□ 0.38
ERCC3-206ENST00000462306 NXF3Q9H4D5 531 aaKnown RBP17.45■□□□□ 0.38
ERCC3-206ENST00000462306 ALG13Q9NP73 1137 aaKnown RBP17.45■□□□□ 0.38
ERCC3-206ENST00000462306 UBN1Q9NPG3 1134 aa17.45■□□□□ 0.38
ERCC3-206ENST00000462306 AAASQ9NRG9 546 aa17.45■□□□□ 0.38
ERCC3-206ENST00000462306 TBC1D13Q9NVG8 400 aa17.45■□□□□ 0.38
ERCC3-206ENST00000462306 INPP5FQ9Y2H2 1132 aa17.45■□□□□ 0.38
ERCC3-206ENST00000462306 MYMKA6NI61 221 aa17.44■□□□□ 0.38
ERCC3-206ENST00000462306 INPPL1O15357 1258 aa17.44■□□□□ 0.38
ERCC3-206ENST00000462306 KRT18P05783 430 aaKnown RBP17.44■□□□□ 0.38
ERCC3-206ENST00000462306 MAPTP10636 758 aaKnown RBP17.44■□□□□ 0.38
ERCC3-206ENST00000462306 STAT6P42226 847 aa17.44■□□□□ 0.38
ERCC3-206ENST00000462306 SMTNP53814 917 aa17.44■□□□□ 0.38
ERCC3-206ENST00000462306 NCKAP1LP55160 1127 aa17.44■□□□□ 0.38
ERCC3-206ENST00000462306 CAMK1Q14012 370 aa17.44■□□□□ 0.38
ERCC3-206ENST00000462306 ATF7IP2Q5U623 682 aa17.44■□□□□ 0.38
ERCC3-206ENST00000462306 SV2BQ7L1I2 683 aa17.44■□□□□ 0.38
ERCC3-206ENST00000462306 MICALL1Q8N3F8 863 aa17.44■□□□□ 0.38
ERCC3-206ENST00000462306 SPPL3Q8TCT6 385 aa17.44■□□□□ 0.38
ERCC3-206ENST00000462306 LEO1Q8WVC0 666 aaPredicted RBP17.44■□□□□ 0.38
ERCC3-206ENST00000462306 ACO2Q99798 780 aaKnown RBP17.44■□□□□ 0.38
ERCC3-206ENST00000462306 TRIM6Q9C030 488 aaPredicted RBP17.44■□□□□ 0.38
ERCC3-206ENST00000462306 PARVGQ9HBI0 331 aa17.44■□□□□ 0.38
ERCC3-206ENST00000462306 TNFSF13BQ9Y275 285 aa17.44■□□□□ 0.38
ERCC3-206ENST00000462306 PCDHB12Q9Y5F1 795 aa17.44■□□□□ 0.38
ERCC3-206ENST00000462306 EYSQ5T1H1 3165 aa17.43■□□□□ 0.38
ERCC3-206ENST00000462306 MYH11P35749 1972 aa17.43■□□□□ 0.38
ERCC3-206ENST00000462306 B4GALT3O60512 393 aa17.43■□□□□ 0.38
ERCC3-206ENST00000462306 FAM13AO94988 1023 aa17.43■□□□□ 0.38
ERCC3-206ENST00000462306 DNAJB1P25685 340 aa17.43■□□□□ 0.38
ERCC3-206ENST00000462306 PBX3P40426 434 aa17.43■□□□□ 0.38
ERCC3-206ENST00000462306 KRT85P78386 507 aa17.43■□□□□ 0.38
ERCC3-206ENST00000462306 PTPROQ16827 1216 aa17.43■□□□□ 0.38
ERCC3-206ENST00000462306 CSPP1Q1MSJ5 1256 aa17.43■□□□□ 0.38
ERCC3-206ENST00000462306 TMEM132AQ24JP5 1023 aa17.43■□□□□ 0.38
ERCC3-206ENST00000462306 RESP18Q5W5W9 173 aa17.43■□□□□ 0.38
ERCC3-206ENST00000462306 KCNT2Q6UVM3 1135 aa17.43■□□□□ 0.38
ERCC3-206ENST00000462306 MYCT1Q8N699 235 aa17.43■□□□□ 0.38
ERCC3-206ENST00000462306 DDX12PQ92771 950 aa17.43■□□□□ 0.38
ERCC3-206ENST00000462306 DNAJC19Q96DA6 116 aa17.43■□□□□ 0.38
ERCC3-206ENST00000462306 FIZ1Q96SL8 496 aa17.43■□□□□ 0.38
ERCC3-206ENST00000462306 TARS2Q9BW92 718 aaKnown RBP17.43■□□□□ 0.38
ERCC3-206ENST00000462306 LMAN2LQ9H0V9 348 aa17.43■□□□□ 0.38
ERCC3-206ENST00000462306 PTPRHQ9HD43 1115 aa17.43■□□□□ 0.38
ERCC3-206ENST00000462306 GIT1Q9Y2X7 761 aa17.43■□□□□ 0.38
ERCC3-206ENST00000462306 ATP6V1DQ9Y5K8 247 aa17.43■□□□□ 0.38
ERCC3-206ENST00000462306 ARL5CA6NH57 179 aa17.42■□□□□ 0.38
ERCC3-206ENST00000462306 ABLIM1O14639 778 aa17.42■□□□□ 0.38
ERCC3-206ENST00000462306 TBCAO75347 108 aaKnown RBP17.42■□□□□ 0.38
ERCC3-206ENST00000462306 FGF18O76093 207 aa17.42■□□□□ 0.38
ERCC3-206ENST00000462306 AKAP5P24588 427 aa17.42■□□□□ 0.38
ERCC3-206ENST00000462306 DYMQ7RTS9 669 aa17.42■□□□□ 0.38
ERCC3-206ENST00000462306 HAUS6Q7Z4H7 955 aa17.42■□□□□ 0.38
ERCC3-206ENST00000462306 ZNF280BQ86YH2 543 aa17.42■□□□□ 0.38
ERCC3-206ENST00000462306 THNSL1Q8IYQ7 743 aa17.42■□□□□ 0.38
ERCC3-206ENST00000462306 HACE1Q8IYU2 909 aa17.42■□□□□ 0.38
ERCC3-206ENST00000462306 GSTCDQ8NEC7 633 aa17.42■□□□□ 0.38
ERCC3-206ENST00000462306 URGCPQ8TCY9 931 aa17.42■□□□□ 0.38
ERCC3-206ENST00000462306 ZFP42Q96MM3 310 aa17.42■□□□□ 0.38
ERCC3-206ENST00000462306 ZNF558Q96NG5 402 aa17.42■□□□□ 0.38
ERCC3-206ENST00000462306 GAD1Q99259 594 aa17.42■□□□□ 0.38
ERCC3-206ENST00000462306 ADPGKQ9BRR6 497 aa17.42■□□□□ 0.38
ERCC3-206ENST00000462306 APOL6Q9BWW8 343 aa17.42■□□□□ 0.38
ERCC3-206ENST00000462306 MRPL4Q9BYD3 311 aaKnown RBP17.42■□□□□ 0.38
ERCC3-206ENST00000462306 NRDE2Q9H7Z3 1164 aa17.42■□□□□ 0.38
ERCC3-206ENST00000462306 MIOSQ9NXC5 875 aa17.42■□□□□ 0.38
ERCC3-206ENST00000462306 KANSL3Q9P2N6 904 aa17.42■□□□□ 0.38
ERCC3-206ENST00000462306 H0YCG3 227 aa17.41■□□□□ 0.38
ERCC3-206ENST00000462306 TRAK2O60296 914 aa17.41■□□□□ 0.38
ERCC3-206ENST00000462306 DDHD2O94830 711 aa17.41■□□□□ 0.38
ERCC3-206ENST00000462306 POMCP01189 267 aa17.41■□□□□ 0.38
ERCC3-206ENST00000462306 PROZP22891 400 aa17.41■□□□□ 0.38
ERCC3-206ENST00000462306 MLH1P40692 756 aa17.41■□□□□ 0.38
ERCC3-206ENST00000462306 BCAR1P56945 870 aa17.41■□□□□ 0.38
ERCC3-206ENST00000462306 NUCB2P80303 420 aa17.41■□□□□ 0.38
ERCC3-206ENST00000462306 DCAF4L1Q3SXM0 396 aa17.41■□□□□ 0.38
ERCC3-206ENST00000462306 SLC39A11Q8N1S5 342 aa17.41■□□□□ 0.38
ERCC3-206ENST00000462306 POF1BQ8WVV4 589 aa17.41■□□□□ 0.38
ERCC3-206ENST00000462306 SPATA32Q96LK8 384 aa17.41■□□□□ 0.38
ERCC3-206ENST00000462306 CUEDC2Q9H467 287 aa17.41■□□□□ 0.38
ERCC3-206ENST00000462306 ZHX3Q9H4I2 956 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms