RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 SNRPFP62306 86 aaKnown RBP16.64■□□□□ 0.25
TMEM39A-203ENST00000461654 GTF2BQ00403 316 aa16.64■□□□□ 0.25
TMEM39A-203ENST00000461654 FANCCQ00597 558 aa16.64■□□□□ 0.25
TMEM39A-203ENST00000461654 CCDC173Q0VFZ6 552 aa16.64■□□□□ 0.25
TMEM39A-203ENST00000461654 STRN3Q13033 797 aa16.64■□□□□ 0.25
TMEM39A-203ENST00000461654 FILIP1LQ4L180 1135 aa16.64■□□□□ 0.25
TMEM39A-203ENST00000461654 HSP90AA4PQ58FG1 418 aa16.64■□□□□ 0.25
TMEM39A-203ENST00000461654 CDKAL1Q5VV42 579 aa16.64■□□□□ 0.25
TMEM39A-203ENST00000461654 CNKSR3Q6P9H4 555 aa16.64■□□□□ 0.25
TMEM39A-203ENST00000461654 CREBRFQ8IUR6 639 aa16.64■□□□□ 0.25
TMEM39A-203ENST00000461654 MAFAQ8NHW3 353 aaPredicted RBP16.64■□□□□ 0.25
TMEM39A-203ENST00000461654 PRPF31Q8WWY3 499 aaKnown RBP16.64■□□□□ 0.25
TMEM39A-203ENST00000461654 CEP63Q96MT8 703 aa16.64■□□□□ 0.25
TMEM39A-203ENST00000461654 MAP7D2Q96T17 732 aa16.64■□□□□ 0.25
TMEM39A-203ENST00000461654 DUSP9Q99956 384 aaKnown RBP16.64■□□□□ 0.25
TMEM39A-203ENST00000461654 GBP3Q9H0R5 595 aa16.64■□□□□ 0.25
TMEM39A-203ENST00000461654 NKX2-4Q9H2Z4 354 aa16.64■□□□□ 0.25
TMEM39A-203ENST00000461654 KCTD10Q9H3F6 313 aa16.64■□□□□ 0.25
TMEM39A-203ENST00000461654 SETD4Q9NVD3 440 aa16.64■□□□□ 0.25
TMEM39A-203ENST00000461654 CGNQ9P2M7 1197 aaKnown RBP16.64■□□□□ 0.25
TMEM39A-203ENST00000461654 TRAF3IP3Q9Y228 551 aa16.64■□□□□ 0.25
TMEM39A-203ENST00000461654 WDR81Q562E7 1941 aa16.63■□□□□ 0.25
TMEM39A-203ENST00000461654 KCNJ18B7U540 433 aa16.63■□□□□ 0.25
TMEM39A-203ENST00000461654 EFCAB14O75071 495 aa16.63■□□□□ 0.25
TMEM39A-203ENST00000461654 PPP1R37O75864 691 aa16.63■□□□□ 0.25
TMEM39A-203ENST00000461654 GNA14O95837 355 aa16.63■□□□□ 0.25
TMEM39A-203ENST00000461654 GLRA2P23416 452 aa16.63■□□□□ 0.25
TMEM39A-203ENST00000461654 EFNA5P52803 228 aa16.63■□□□□ 0.25
TMEM39A-203ENST00000461654 RABGGTBP53611 331 aa16.63■□□□□ 0.25
TMEM39A-203ENST00000461654 KCNJ12Q14500 433 aa16.63■□□□□ 0.25
TMEM39A-203ENST00000461654 MBTPS1Q14703 1052 aa16.63■□□□□ 0.25
TMEM39A-203ENST00000461654 ZCWPW2Q504Y3 356 aa16.63■□□□□ 0.25
TMEM39A-203ENST00000461654 MTHFD1LQ6UB35 978 aa16.63■□□□□ 0.25
TMEM39A-203ENST00000461654 RPAINQ86UA6 219 aa16.63■□□□□ 0.25
TMEM39A-203ENST00000461654 HERC6Q8IVU3 1022 aa16.63■□□□□ 0.25
TMEM39A-203ENST00000461654 ZBTB8OSQ8IWT0 167 aa16.63■□□□□ 0.25
TMEM39A-203ENST00000461654 LRRC71Q8N4P6 559 aa16.63■□□□□ 0.25
TMEM39A-203ENST00000461654 TMEM161BQ8NDZ6 487 aa16.63■□□□□ 0.25
TMEM39A-203ENST00000461654 BSNDQ8WZ55 320 aa16.63■□□□□ 0.25
TMEM39A-203ENST00000461654 STRA6Q9BX79 667 aa16.63■□□□□ 0.25
TMEM39A-203ENST00000461654 C2orf40Q9H1Z8 148 aa16.63■□□□□ 0.25
TMEM39A-203ENST00000461654 HSD3B7Q9H2F3 369 aa16.63■□□□□ 0.25
TMEM39A-203ENST00000461654 TBX20Q9UMR3 447 aa16.63■□□□□ 0.25
TMEM39A-203ENST00000461654 TRIP12Q14669 1992 aaPredicted RBP16.62■□□□□ 0.25
TMEM39A-203ENST00000461654 ATP1A3P13637 1013 aa16.62■□□□□ 0.25
TMEM39A-203ENST00000461654 THPOP40225 353 aa16.62■□□□□ 0.25
TMEM39A-203ENST00000461654 ZNF75DP51815 510 aa16.62■□□□□ 0.25
TMEM39A-203ENST00000461654 UBASH3AP57075 661 aa16.62■□□□□ 0.25
TMEM39A-203ENST00000461654 LAMTOR4Q0VGL1 99 aa16.62■□□□□ 0.25
TMEM39A-203ENST00000461654 ADAM9Q13443 819 aa16.62■□□□□ 0.25
TMEM39A-203ENST00000461654 IKBKEQ14164 716 aa16.62■□□□□ 0.25
TMEM39A-203ENST00000461654 TCP11X2Q5H9J9 407 aa16.62■□□□□ 0.25
TMEM39A-203ENST00000461654 FAM26DQ5JW98 314 aa16.62■□□□□ 0.25
TMEM39A-203ENST00000461654 RHPN2Q8IUC4 686 aa16.62■□□□□ 0.25
TMEM39A-203ENST00000461654 ASAP3Q8TDY4 903 aa16.62■□□□□ 0.25
TMEM39A-203ENST00000461654 IFNKQ9P0W0 207 aa16.62■□□□□ 0.25
TMEM39A-203ENST00000461654 K7ERI5 159 aa16.61■□□□□ 0.25
TMEM39A-203ENST00000461654 NR3C1P04150 777 aa16.61■□□□□ 0.25
TMEM39A-203ENST00000461654 SRGAP2CP0DJJ0 459 aa16.61■□□□□ 0.25
TMEM39A-203ENST00000461654 MYOGP15173 224 aa16.61■□□□□ 0.25
TMEM39A-203ENST00000461654 NR2F2P24468 414 aa16.61■□□□□ 0.25
TMEM39A-203ENST00000461654 HOXD13P35453 343 aa16.61■□□□□ 0.25
TMEM39A-203ENST00000461654 MTIF2P46199 727 aaKnown RBP16.61■□□□□ 0.25
TMEM39A-203ENST00000461654 KCNJ6P48051 423 aa16.61■□□□□ 0.25
TMEM39A-203ENST00000461654 CLCN3P51790 818 aa16.61■□□□□ 0.25
TMEM39A-203ENST00000461654 WDR5P61964 334 aaKnown RBP16.61■□□□□ 0.25
TMEM39A-203ENST00000461654 CDC42EP1Q00587 391 aa16.61■□□□□ 0.25
TMEM39A-203ENST00000461654 CAPSQ13938 189 aa16.61■□□□□ 0.25
TMEM39A-203ENST00000461654 CCDC40Q4G0X9 1142 aa16.61■□□□□ 0.25
TMEM39A-203ENST00000461654 FILIP1Q7Z7B0 1213 aa16.61■□□□□ 0.25
TMEM39A-203ENST00000461654 MAP4K3Q8IVH8 894 aa16.61■□□□□ 0.25
TMEM39A-203ENST00000461654 KSR1Q8IVT5 923 aa16.61■□□□□ 0.25
TMEM39A-203ENST00000461654 DRC7Q8IY82 874 aa16.61■□□□□ 0.25
TMEM39A-203ENST00000461654 LMBR1Q8WVP7 490 aa16.61■□□□□ 0.25
TMEM39A-203ENST00000461654 BICD1Q96G01 975 aa16.61■□□□□ 0.25
TMEM39A-203ENST00000461654 MRFAP1L1Q96HT8 127 aa16.61■□□□□ 0.25
TMEM39A-203ENST00000461654 CNOT6LQ96LI5 555 aaKnown RBP16.61■□□□□ 0.25
TMEM39A-203ENST00000461654 KIFC3Q9BVG8 833 aa16.61■□□□□ 0.25
TMEM39A-203ENST00000461654 ARHGAP28Q9P2N2 729 aa16.61■□□□□ 0.25
TMEM39A-203ENST00000461654 LIMA1Q9UHB6 759 aaKnown RBP16.61■□□□□ 0.25
TMEM39A-203ENST00000461654 AKT3Q9Y243 479 aa16.61■□□□□ 0.25
TMEM39A-203ENST00000461654 MBLAC1A4D2B0 266 aaPredicted RBP16.6■□□□□ 0.25
TMEM39A-203ENST00000461654 PHKA2P46019 1235 aa16.6■□□□□ 0.25
TMEM39A-203ENST00000461654 KCNA1Q09470 495 aa16.6■□□□□ 0.25
TMEM39A-203ENST00000461654 MKRN4PQ13434 485 aaPredicted RBP16.6■□□□□ 0.25
TMEM39A-203ENST00000461654 DRP2Q13474 957 aa16.6■□□□□ 0.25
TMEM39A-203ENST00000461654 MYBPC2Q14324 1141 aa16.6■□□□□ 0.25
TMEM39A-203ENST00000461654 HSP90AA2PQ14568 343 aaPredicted RBP16.6■□□□□ 0.25
TMEM39A-203ENST00000461654 NFIL3Q16649 462 aa16.6■□□□□ 0.25
TMEM39A-203ENST00000461654 TCTN1Q2MV58 587 aa16.6■□□□□ 0.25
TMEM39A-203ENST00000461654 PLEKHG4Q58EX7 1191 aa16.6■□□□□ 0.25
TMEM39A-203ENST00000461654 PPP2R2DQ66LE6 453 aa16.6■□□□□ 0.25
TMEM39A-203ENST00000461654 TAF2Q6P1X5 1199 aa16.6■□□□□ 0.25
TMEM39A-203ENST00000461654 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.6■□□□□ 0.25
TMEM39A-203ENST00000461654 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.6■□□□□ 0.25
TMEM39A-203ENST00000461654 RNF149Q8NC42 400 aa16.6■□□□□ 0.25
TMEM39A-203ENST00000461654 SCLT1Q96NL6 688 aa16.6■□□□□ 0.25
TMEM39A-203ENST00000461654 GAS2L1Q99501 681 aaPredicted RBP16.6■□□□□ 0.25
TMEM39A-203ENST00000461654 XPO4Q9C0E2 1151 aaKnown RBP16.6■□□□□ 0.25
TMEM39A-203ENST00000461654 PRDM12Q9H4Q4 367 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms