RNA–Protein interactions for RNA: ENST00000461489.1

COL21A1-205, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 4

Gene COL21A1, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-205ENST00000461489 CCDC178Q5BJE1 867 aa5.5□□□□□ -1.53
COL21A1-205ENST00000461489 CNNM4Q6P4Q7 775 aa5.5□□□□□ -1.53
COL21A1-205ENST00000461489 GDF7Q7Z4P5 450 aa5.5□□□□□ -1.53
COL21A1-205ENST00000461489 XYLT1Q86Y38 959 aa5.5□□□□□ -1.53
COL21A1-205ENST00000461489 MSL3Q8N5Y2 521 aaKnown RBP5.5□□□□□ -1.53
COL21A1-205ENST00000461489 SREK1Q8WXA9 508 aaKnown RBP5.5□□□□□ -1.53
COL21A1-205ENST00000461489 TOR3AQ9H497 397 aa5.5□□□□□ -1.53
COL21A1-205ENST00000461489 SPON1Q9HCB6 807 aa5.5□□□□□ -1.53
COL21A1-205ENST00000461489 ANKFY1Q9P2R3 1169 aa5.5□□□□□ -1.53
COL21A1-205ENST00000461489 CLCA2Q9UQC9 943 aa5.5□□□□□ -1.53
COL21A1-205ENST00000461489 CD2APQ9Y5K6 639 aa5.5□□□□□ -1.53
COL21A1-205ENST00000461489 PCSK5Q92824 1860 aa5.49□□□□□ -1.53
COL21A1-205ENST00000461489 PRSS38A1L453 326 aa5.49□□□□□ -1.53
COL21A1-205ENST00000461489 ZAR1LA6NP61 321 aa5.49□□□□□ -1.53
COL21A1-205ENST00000461489 USP14P54578 494 aa5.49□□□□□ -1.53
COL21A1-205ENST00000461489 TAP1Q03518 808 aa5.49□□□□□ -1.53
COL21A1-205ENST00000461489 PPARAQ07869 468 aa5.49□□□□□ -1.53
COL21A1-205ENST00000461489 SART3Q15020 963 aaKnown RBP5.49□□□□□ -1.53
COL21A1-205ENST00000461489 GPR158Q5T848 1215 aa5.49□□□□□ -1.53
COL21A1-205ENST00000461489 STRIP1Q5VSL9 837 aa5.49□□□□□ -1.53
COL21A1-205ENST00000461489 LRRTM3Q86VH5 581 aa5.49□□□□□ -1.53
COL21A1-205ENST00000461489 LCORLQ8N3X6 602 aa5.49□□□□□ -1.53
COL21A1-205ENST00000461489 LILRA3Q8N6C8 439 aaPredicted RBP5.49□□□□□ -1.53
COL21A1-205ENST00000461489 SUPT20HQ8NEM7 779 aa5.49□□□□□ -1.53
COL21A1-205ENST00000461489 GPR101Q96P66 508 aaPredicted RBP5.49□□□□□ -1.53
COL21A1-205ENST00000461489 WDR11Q9BZH6 1224 aa5.49□□□□□ -1.53
COL21A1-205ENST00000461489 MTFR1LQ9H019 292 aa5.49□□□□□ -1.53
COL21A1-205ENST00000461489 SERHL2Q9H4I8 314 aa5.49□□□□□ -1.53
COL21A1-205ENST00000461489 AKIP1Q9NQ31 210 aa5.49□□□□□ -1.53
COL21A1-205ENST00000461489 PTGFRNQ9P2B2 879 aa5.49□□□□□ -1.53
COL21A1-205ENST00000461489 TNFRSF18Q9Y5U5 241 aa5.49□□□□□ -1.53
COL21A1-205ENST00000461489 COL4A3Q01955 1670 aa5.49□□□□□ -1.53
COL21A1-205ENST00000461489 A0A1W2PR48 441 aa5.48□□□□□ -1.53
COL21A1-205ENST00000461489 LCHNA4D1U4 455 aa5.48□□□□□ -1.53
COL21A1-205ENST00000461489 LEFTY2O00292 366 aa5.48□□□□□ -1.53
COL21A1-205ENST00000461489 PRAMEF4O60810 478 aa5.48□□□□□ -1.53
COL21A1-205ENST00000461489 NCR1O76036 304 aa5.48□□□□□ -1.53
COL21A1-205ENST00000461489 NDUFA10O95299 355 aa5.48□□□□□ -1.53
COL21A1-205ENST00000461489 POU3F2P20265 443 aaPredicted RBP5.48□□□□□ -1.53
COL21A1-205ENST00000461489 FBLP22087 321 aaKnown RBP5.48□□□□□ -1.53
COL21A1-205ENST00000461489 LSP1P33241 339 aa5.48□□□□□ -1.53
COL21A1-205ENST00000461489 ZEB1P37275 1124 aaPredicted RBP5.48□□□□□ -1.53
COL21A1-205ENST00000461489 RNASE9P60153 205 aaKnown RBP5.48□□□□□ -1.53
COL21A1-205ENST00000461489 MRPS21P82921 87 aaKnown RBP5.48□□□□□ -1.53
COL21A1-205ENST00000461489 OCRLQ01968 901 aa5.48□□□□□ -1.53
COL21A1-205ENST00000461489 CCDC142Q17RM4 750 aa5.48□□□□□ -1.53
COL21A1-205ENST00000461489 OLFML1Q6UWY5 402 aa5.48□□□□□ -1.53
COL21A1-205ENST00000461489 Q6YL49 198 aa5.48□□□□□ -1.53
COL21A1-205ENST00000461489 GLB1L2Q8IW92 636 aa5.48□□□□□ -1.53
COL21A1-205ENST00000461489 ZNF610Q8N9Z0 462 aa5.48□□□□□ -1.53
COL21A1-205ENST00000461489 CDC5LQ99459 802 aaKnown RBP5.48□□□□□ -1.53
COL21A1-205ENST00000461489 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.48□□□□□ -1.53
COL21A1-205ENST00000461489 GAGE12BA1L429 117 aa5.47□□□□□ -1.53
COL21A1-205ENST00000461489 GAGE12HA6NDE8 117 aa5.47□□□□□ -1.53
COL21A1-205ENST00000461489 TMEM200CA6NKL6 621 aa5.47□□□□□ -1.53
COL21A1-205ENST00000461489 SCNN1BP51168 640 aa5.47□□□□□ -1.53
COL21A1-205ENST00000461489 PHC1P78364 1004 aa5.47□□□□□ -1.53
COL21A1-205ENST00000461489 APBA1Q02410 837 aa5.47□□□□□ -1.53
COL21A1-205ENST00000461489 NHLH2Q02577 135 aa5.47□□□□□ -1.53
COL21A1-205ENST00000461489 UBE3CQ15386 1083 aa5.47□□□□□ -1.53
COL21A1-205ENST00000461489 GPRIN1Q7Z2K8 1008 aa5.47□□□□□ -1.53
COL21A1-205ENST00000461489 PRIMA1Q86XR5 153 aa5.47□□□□□ -1.53
COL21A1-205ENST00000461489 HOMER1Q86YM7 354 aa5.47□□□□□ -1.53
COL21A1-205ENST00000461489 SMC1BQ8NDV3 1235 aa5.47□□□□□ -1.53
COL21A1-205ENST00000461489 OR10H5Q8NGA6 315 aa5.47□□□□□ -1.53
COL21A1-205ENST00000461489 ANO3Q9BYT9 981 aa5.47□□□□□ -1.53
COL21A1-205ENST00000461489 MS4A5Q9H3V2 200 aa5.47□□□□□ -1.53
COL21A1-205ENST00000461489 CHST2Q9Y4C5 530 aa5.47□□□□□ -1.53
COL21A1-205ENST00000461489 NUMBLQ9Y6R0 609 aa5.47□□□□□ -1.53
COL21A1-205ENST00000461489 FAM83GA6ND36 823 aa5.46□□□□□ -1.54
COL21A1-205ENST00000461489 KIAA0355O15063 1070 aa5.46□□□□□ -1.54
COL21A1-205ENST00000461489 LTA4HP09960 611 aaKnown RBP5.46□□□□□ -1.54
COL21A1-205ENST00000461489 LMO1P25800 156 aa5.46□□□□□ -1.54
COL21A1-205ENST00000461489 AVPR1BP47901 424 aa5.46□□□□□ -1.54
COL21A1-205ENST00000461489 IL2P60568 153 aa5.46□□□□□ -1.54
COL21A1-205ENST00000461489 PCBP1Q15365 356 aaKnown RBP eCLIP5.46□□□□□ -1.54
COL21A1-205ENST00000461489 CCDC144BQ3MJ40 725 aa5.46□□□□□ -1.54
COL21A1-205ENST00000461489 ADGRG3Q86Y34 549 aa5.46□□□□□ -1.54
COL21A1-205ENST00000461489 PLXDC1Q8IUK5 500 aa5.46□□□□□ -1.54
COL21A1-205ENST00000461489 ARHGEF19Q8IW93 802 aa5.46□□□□□ -1.54
COL21A1-205ENST00000461489 CMTR2Q8IYT2 770 aaKnown RBP5.46□□□□□ -1.54
COL21A1-205ENST00000461489 ZNF764Q96H86 408 aaPredicted RBP5.46□□□□□ -1.54
COL21A1-205ENST00000461489 SPTLC3Q9NUV7 552 aa5.46□□□□□ -1.54
COL21A1-205ENST00000461489 POGKQ9P215 609 aa5.46□□□□□ -1.54
COL21A1-205ENST00000461489 KCNG1Q9UIX4 513 aa5.46□□□□□ -1.54
COL21A1-205ENST00000461489 PPP2R3BQ9Y5P8 575 aa5.46□□□□□ -1.54
COL21A1-205ENST00000461489 B5MCH6 92 aa5.45□□□□□ -1.54
COL21A1-205ENST00000461489 DIRC3C9JPN6 131 aa5.45□□□□□ -1.54
COL21A1-205ENST00000461489 MASP2O00187 686 aa5.45□□□□□ -1.54
COL21A1-205ENST00000461489 RAB11FIP3O75154 756 aa5.45□□□□□ -1.54
COL21A1-205ENST00000461489 CLEC2LP0C7M8 214 aa5.45□□□□□ -1.54
COL21A1-205ENST00000461489 SPATA31D3P0C874 917 aa5.45□□□□□ -1.54
COL21A1-205ENST00000461489 ZSCAN20P17040 1043 aaPredicted RBP5.45□□□□□ -1.54
COL21A1-205ENST00000461489 IL12RB1P42701 662 aa5.45□□□□□ -1.54
COL21A1-205ENST00000461489 MANFP55145 182 aaKnown RBP5.45□□□□□ -1.54
COL21A1-205ENST00000461489 TERF2Q15554 542 aa5.45□□□□□ -1.54
COL21A1-205ENST00000461489 EFCAB12Q6NXP0 572 aa5.45□□□□□ -1.54
COL21A1-205ENST00000461489 CCDC62Q6P9F0 684 aa5.45□□□□□ -1.54
COL21A1-205ENST00000461489 DRICH1Q6PGQ1 229 aaPredicted RBP5.45□□□□□ -1.54
COL21A1-205ENST00000461489 SPATA31D4Q6ZUB0 917 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms