RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 PCDHA12Q9UN75 941 aa16.64■□□□□ 0.25
SSR4-206ENST00000460616 PCDHA3Q9Y5H8 950 aa16.64■□□□□ 0.25
SSR4-206ENST00000460616 IGSF9BQ9UPX0 1349 aa16.64■□□□□ 0.25
SSR4-206ENST00000460616 ATP5DP30049 168 aa16.63■□□□□ 0.25
SSR4-206ENST00000460616 MKRN3Q13064 507 aaKnown RBP16.63■□□□□ 0.25
SSR4-206ENST00000460616 PARP6Q2NL67 630 aa16.63■□□□□ 0.25
SSR4-206ENST00000460616 TTC27Q6P3X3 843 aa16.63■□□□□ 0.25
SSR4-206ENST00000460616 CCDC137Q6PK04 289 aaKnown RBP16.63■□□□□ 0.25
SSR4-206ENST00000460616 MFN1Q8IWA4 741 aa16.63■□□□□ 0.25
SSR4-206ENST00000460616 ART4Q93070 314 aa16.63■□□□□ 0.25
SSR4-206ENST00000460616 SERPINB12Q96P63 405 aa16.63■□□□□ 0.25
SSR4-206ENST00000460616 ZC3H12CQ9C0D7 883 aaKnown RBP16.63■□□□□ 0.25
SSR4-206ENST00000460616 UBA5Q9GZZ9 404 aa16.63■□□□□ 0.25
SSR4-206ENST00000460616 KCNQ5Q9NR82 932 aa16.63■□□□□ 0.25
SSR4-206ENST00000460616 TRAF3IP3Q9Y228 551 aa16.63■□□□□ 0.25
SSR4-206ENST00000460616 FAM170AA1A519 330 aa16.63■□□□□ 0.25
SSR4-206ENST00000460616 ABLIM1O14639 778 aa16.63■□□□□ 0.25
SSR4-206ENST00000460616 PDHA1P08559 390 aa16.63■□□□□ 0.25
SSR4-206ENST00000460616 HSPA6P17066 643 aa16.63■□□□□ 0.25
SSR4-206ENST00000460616 ATP6V1C1P21283 382 aa16.63■□□□□ 0.25
SSR4-206ENST00000460616 RPS6KA3P51812 740 aa16.63■□□□□ 0.25
SSR4-206ENST00000460616 ADCY7P51828 1080 aa16.63■□□□□ 0.25
SSR4-206ENST00000460616 CCDC15Q0P6D6 951 aa16.63■□□□□ 0.25
SSR4-206ENST00000460616 ECHDC2Q86YB7 292 aa16.63■□□□□ 0.25
SSR4-206ENST00000460616 HAS1Q92839 578 aa16.63■□□□□ 0.25
SSR4-206ENST00000460616 NFKBIEO00221 500 aa16.62■□□□□ 0.25
SSR4-206ENST00000460616 AKAP3O75969 853 aa16.62■□□□□ 0.25
SSR4-206ENST00000460616 GH1P01241 217 aa16.62■□□□□ 0.25
SSR4-206ENST00000460616 CYP11B2P19099 503 aa16.62■□□□□ 0.25
SSR4-206ENST00000460616 STX2P32856 288 aa16.62■□□□□ 0.25
SSR4-206ENST00000460616 TNNI2P48788 182 aa16.62■□□□□ 0.25
SSR4-206ENST00000460616 CASP5P51878 434 aa16.62■□□□□ 0.25
SSR4-206ENST00000460616 ROR2Q01974 943 aaKnown RBP16.62■□□□□ 0.25
SSR4-206ENST00000460616 KNOP1Q1ED39 458 aaKnown RBP16.62■□□□□ 0.25
SSR4-206ENST00000460616 TRMT10CQ7L0Y3 403 aaKnown RBP16.62■□□□□ 0.25
SSR4-206ENST00000460616 APLFQ8IW19 511 aaPredicted RBP16.62■□□□□ 0.25
SSR4-206ENST00000460616 STK32AQ8WU08 396 aa16.62■□□□□ 0.25
SSR4-206ENST00000460616 COA7Q96BR5 231 aa16.62■□□□□ 0.25
SSR4-206ENST00000460616 ARHGEF26Q96DR7 871 aa16.62■□□□□ 0.25
SSR4-206ENST00000460616 DDX25Q9UHL0 483 aaKnown RBP16.62■□□□□ 0.25
SSR4-206ENST00000460616 ALG6Q9Y672 507 aa16.62■□□□□ 0.25
SSR4-206ENST00000460616 PFASO15067 1338 aa16.62■□□□□ 0.25
SSR4-206ENST00000460616 SYNGAP1Q96PV0 1343 aa16.62■□□□□ 0.25
SSR4-206ENST00000460616 CTNNA2P26232 953 aa16.62■□□□□ 0.25
SSR4-206ENST00000460616 SMARCA1P28370 1054 aa16.62■□□□□ 0.25
SSR4-206ENST00000460616 MPP2Q14168 576 aa16.62■□□□□ 0.25
SSR4-206ENST00000460616 HYIQ5T013 277 aa16.62■□□□□ 0.25
SSR4-206ENST00000460616 CC2D2BQ6DHV5 1058 aa16.62■□□□□ 0.25
SSR4-206ENST00000460616 CGB2Q6NT52 195 aa16.62■□□□□ 0.25
SSR4-206ENST00000460616 CCDC105Q8IYK2 499 aa16.62■□□□□ 0.25
SSR4-206ENST00000460616 TEKT4Q8WW24 435 aa16.62■□□□□ 0.25
SSR4-206ENST00000460616 DDX23Q9BUQ8 820 aaKnown RBP16.62■□□□□ 0.25
SSR4-206ENST00000460616 USP40Q9NVE5 1235 aa16.62■□□□□ 0.25
SSR4-206ENST00000460616 CYP39A1Q9NYL5 469 aa16.62■□□□□ 0.25
SSR4-206ENST00000460616 PTPN22Q9Y2R2 807 aa16.62■□□□□ 0.25
SSR4-206ENST00000460616 KDM3AQ9Y4C1 1321 aa16.62■□□□□ 0.25
SSR4-206ENST00000460616 SPDYE5A6NIY4 337 aa16.61■□□□□ 0.25
SSR4-206ENST00000460616 ATP5HO75947 161 aa16.61■□□□□ 0.25
SSR4-206ENST00000460616 NPTXRO95502 500 aa16.61■□□□□ 0.25
SSR4-206ENST00000460616 ACSL3O95573 720 aa16.61■□□□□ 0.25
SSR4-206ENST00000460616 TPBGLP0DKB5 382 aa16.61■□□□□ 0.25
SSR4-206ENST00000460616 BRAFP15056 766 aa16.61■□□□□ 0.25
SSR4-206ENST00000460616 SOX5P35711 763 aa16.61■□□□□ 0.25
SSR4-206ENST00000460616 ACVR2BQ13705 512 aa16.61■□□□□ 0.25
SSR4-206ENST00000460616 LBRQ14739 615 aaKnown RBP16.61■□□□□ 0.25
SSR4-206ENST00000460616 GRIK5Q16478 980 aa16.61■□□□□ 0.25
SSR4-206ENST00000460616 VSIG1Q86XK7 387 aa16.61■□□□□ 0.25
SSR4-206ENST00000460616 UBL4BQ8N7F7 174 aa16.61■□□□□ 0.25
SSR4-206ENST00000460616 ANKLE1Q8NAG6 615 aa16.61■□□□□ 0.25
SSR4-206ENST00000460616 GRAMD1AQ96CP6 724 aa16.61■□□□□ 0.25
SSR4-206ENST00000460616 THAP2Q9H0W7 228 aa16.61■□□□□ 0.25
SSR4-206ENST00000460616 METTL14Q9HCE5 456 aaKnown RBP16.61■□□□□ 0.25
SSR4-206ENST00000460616 ATAD5Q96QE3 1844 aa16.61■□□□□ 0.25
SSR4-206ENST00000460616 FOXO6A8MYZ6 492 aa16.61■□□□□ 0.25
SSR4-206ENST00000460616 ANKRD63C9JTQ0 380 aa16.61■□□□□ 0.25
SSR4-206ENST00000460616 CALUO43852 315 aaPredicted RBP16.61■□□□□ 0.25
SSR4-206ENST00000460616 PEX11AO75192 247 aa16.61■□□□□ 0.25
SSR4-206ENST00000460616 RTN3O95197 1032 aaPredicted RBP16.61■□□□□ 0.25
SSR4-206ENST00000460616 IL1R1P14778 569 aa16.61■□□□□ 0.25
SSR4-206ENST00000460616 RASA1P20936 1047 aa16.61■□□□□ 0.25
SSR4-206ENST00000460616 PEX5P50542 639 aa16.61■□□□□ 0.25
SSR4-206ENST00000460616 TUBP50607 506 aa16.61■□□□□ 0.25
SSR4-206ENST00000460616 PRELPP51888 382 aa16.61■□□□□ 0.25
SSR4-206ENST00000460616 MTFR1Q15390 333 aa16.61■□□□□ 0.25
SSR4-206ENST00000460616 INTS8Q75QN2 995 aaKnown RBP16.61■□□□□ 0.25
SSR4-206ENST00000460616 DZIP1Q86YF9 867 aaKnown RBP16.61■□□□□ 0.25
SSR4-206ENST00000460616 RTKN2Q8IZC4 609 aa16.61■□□□□ 0.25
SSR4-206ENST00000460616 OLIG1Q8TAK6 271 aa16.61■□□□□ 0.25
SSR4-206ENST00000460616 SLC35C1Q96A29 364 aa16.61■□□□□ 0.25
SSR4-206ENST00000460616 MAGEB18Q96M61 343 aa16.61■□□□□ 0.25
SSR4-206ENST00000460616 NUDCD1Q96RS6 583 aa16.61■□□□□ 0.25
SSR4-206ENST00000460616 SYT15Q9BQS2 421 aa16.61■□□□□ 0.25
SSR4-206ENST00000460616 PITPNM3Q9BZ71 974 aa16.61■□□□□ 0.25
SSR4-206ENST00000460616 LRMDAQ9H2I8 198 aa16.61■□□□□ 0.25
SSR4-206ENST00000460616 CDC42EP4Q9H3Q1 356 aaKnown RBP16.61■□□□□ 0.25
SSR4-206ENST00000460616 COG5Q9UP83 839 aa16.61■□□□□ 0.25
SSR4-206ENST00000460616 PITPNM2Q9BZ72 1349 aa16.61■□□□□ 0.25
SSR4-206ENST00000460616 CNGA1P29973 690 aa16.6■□□□□ 0.25
SSR4-206ENST00000460616 RNASELQ05823 741 aaKnown RBP16.6■□□□□ 0.25
SSR4-206ENST00000460616 SETDB1Q15047 1291 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms