RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 ARL5CA6NH57 179 aa17.8■□□□□ 0.44
COL7A1-203ENST00000459756 NT5C1B-RDH14C9J2C7 533 aa17.8■□□□□ 0.44
COL7A1-203ENST00000459756 K7ELQ4 463 aaPredicted RBP17.8■□□□□ 0.44
COL7A1-203ENST00000459756 SLC26A4O43511 780 aa17.8■□□□□ 0.44
COL7A1-203ENST00000459756 POMCP01189 267 aa17.8■□□□□ 0.44
COL7A1-203ENST00000459756 AFF1P51825 1210 aaKnown RBP17.8■□□□□ 0.44
COL7A1-203ENST00000459756 PRPF4BQ13523 1007 aaKnown RBP17.8■□□□□ 0.44
COL7A1-203ENST00000459756 SMC1AQ14683 1233 aaKnown RBP17.8■□□□□ 0.44
COL7A1-203ENST00000459756 ZRSR1Q15695 479 aaKnown RBP17.8■□□□□ 0.44
COL7A1-203ENST00000459756 DUSP6Q16828 381 aa17.8■□□□□ 0.44
COL7A1-203ENST00000459756 TMC7Q7Z402 723 aa17.8■□□□□ 0.44
COL7A1-203ENST00000459756 ZNF280BQ86YH2 543 aa17.8■□□□□ 0.44
COL7A1-203ENST00000459756 IGSF21Q96ID5 467 aa17.8■□□□□ 0.44
COL7A1-203ENST00000459756 DRC1Q96MC2 740 aa17.8■□□□□ 0.44
COL7A1-203ENST00000459756 TMEM175Q9BSA9 504 aa17.8■□□□□ 0.44
COL7A1-203ENST00000459756 TIPINQ9BVW5 301 aa17.8■□□□□ 0.44
COL7A1-203ENST00000459756 RNF39Q9H2S5 420 aa17.8■□□□□ 0.44
COL7A1-203ENST00000459756 NXF3Q9H4D5 531 aaKnown RBP17.8■□□□□ 0.44
COL7A1-203ENST00000459756 DNAJB4Q9UDY4 337 aa17.8■□□□□ 0.44
COL7A1-203ENST00000459756 GIT1Q9Y2X7 761 aa17.8■□□□□ 0.44
COL7A1-203ENST00000459756 HES2Q9Y543 173 aa17.8■□□□□ 0.44
COL7A1-203ENST00000459756 ACKR2O00590 384 aa17.79■□□□□ 0.44
COL7A1-203ENST00000459756 N4BP3O15049 544 aa17.79■□□□□ 0.44
COL7A1-203ENST00000459756 PER2O15055 1255 aa17.79■□□□□ 0.44
COL7A1-203ENST00000459756 DDHD2O94830 711 aa17.79■□□□□ 0.44
COL7A1-203ENST00000459756 NPTXRO95502 500 aa17.79■□□□□ 0.44
COL7A1-203ENST00000459756 PRKCBP05771 671 aa17.79■□□□□ 0.44
COL7A1-203ENST00000459756 IL9P15248 144 aa17.79■□□□□ 0.44
COL7A1-203ENST00000459756 SYT1P21579 422 aa17.79■□□□□ 0.44
COL7A1-203ENST00000459756 SLC11A1P49279 550 aa17.79■□□□□ 0.44
COL7A1-203ENST00000459756 TMEM132AQ24JP5 1023 aa17.79■□□□□ 0.44
COL7A1-203ENST00000459756 RINT1Q6NUQ1 792 aa17.79■□□□□ 0.44
COL7A1-203ENST00000459756 KCNK18Q7Z418 384 aa17.79■□□□□ 0.44
COL7A1-203ENST00000459756 DDX53Q86TM3 631 aaKnown RBP17.79■□□□□ 0.44
COL7A1-203ENST00000459756 TMEM173Q86WV6 379 aaPredicted RBP17.79■□□□□ 0.44
COL7A1-203ENST00000459756 FAM178BQ8IXR5 827 aa17.79■□□□□ 0.44
COL7A1-203ENST00000459756 MRPL43Q8N983 215 aaKnown RBP17.79■□□□□ 0.44
COL7A1-203ENST00000459756 CDK5RAP3Q96JB5 506 aa17.79■□□□□ 0.44
COL7A1-203ENST00000459756 MSLNLQ96KJ4 702 aa17.79■□□□□ 0.44
COL7A1-203ENST00000459756 PNMA5Q96PV4 448 aa17.79■□□□□ 0.44
COL7A1-203ENST00000459756 GAD1Q99259 594 aa17.79■□□□□ 0.44
COL7A1-203ENST00000459756 CLEC1BQ9P126 229 aa17.79■□□□□ 0.44
COL7A1-203ENST00000459756 STK39Q9UEW8 545 aa17.79■□□□□ 0.44
COL7A1-203ENST00000459756 CD207Q9UJ71 328 aa17.79■□□□□ 0.44
COL7A1-203ENST00000459756 HIDE1A8MVS5 230 aa17.78■□□□□ 0.44
COL7A1-203ENST00000459756 B4GALT3O60512 393 aa17.78■□□□□ 0.44
COL7A1-203ENST00000459756 HIP1RO75146 1068 aa17.78■□□□□ 0.44
COL7A1-203ENST00000459756 GLP2RO95838 553 aa17.78■□□□□ 0.44
COL7A1-203ENST00000459756 ALDH2P05091 517 aa17.78■□□□□ 0.44
COL7A1-203ENST00000459756 SRGAP2BP0DMP2 458 aa17.78■□□□□ 0.44
COL7A1-203ENST00000459756 MLH1P40692 756 aa17.78■□□□□ 0.44
COL7A1-203ENST00000459756 COASYQ13057 564 aa17.78■□□□□ 0.44
COL7A1-203ENST00000459756 SMAD4Q13485 552 aaKnown RBP17.78■□□□□ 0.44
COL7A1-203ENST00000459756 SF3A1Q15459 793 aaKnown RBP17.78■□□□□ 0.44
COL7A1-203ENST00000459756 CLUL1Q15846 466 aa17.78■□□□□ 0.44
COL7A1-203ENST00000459756 C1orf186Q6ZWK4 172 aa17.78■□□□□ 0.44
COL7A1-203ENST00000459756 CABP7Q86V35 215 aa17.78■□□□□ 0.44
COL7A1-203ENST00000459756 CDR2LQ86X02 465 aaPredicted RBP17.78■□□□□ 0.44
COL7A1-203ENST00000459756 VPS52Q8N1B4 723 aa17.78■□□□□ 0.44
COL7A1-203ENST00000459756 ZFP42Q96MM3 310 aa17.78■□□□□ 0.44
COL7A1-203ENST00000459756 RUSC1Q9BVN2 902 aa17.78■□□□□ 0.44
COL7A1-203ENST00000459756 APOL6Q9BWW8 343 aa17.78■□□□□ 0.44
COL7A1-203ENST00000459756 PDZD7Q9H5P4 517 aa17.78■□□□□ 0.44
COL7A1-203ENST00000459756 C17orf75Q9HAS0 396 aa17.78■□□□□ 0.44
COL7A1-203ENST00000459756 POLD4Q9HCU8 107 aa17.78■□□□□ 0.44
COL7A1-203ENST00000459756 FAN1Q9Y2M0 1017 aa17.78■□□□□ 0.44
COL7A1-203ENST00000459756 CCDC169A6NNP5 214 aa17.77■□□□□ 0.44
COL7A1-203ENST00000459756 LIG1P18858 919 aa17.77■□□□□ 0.44
COL7A1-203ENST00000459756 GUCY2CP25092 1073 aa17.77■□□□□ 0.44
COL7A1-203ENST00000459756 LONP1P36776 959 aaKnown RBP17.77■□□□□ 0.44
COL7A1-203ENST00000459756 UBA7P41226 1012 aa17.77■□□□□ 0.44
COL7A1-203ENST00000459756 DMP1Q13316 513 aaPredicted RBP17.77■□□□□ 0.44
COL7A1-203ENST00000459756 SMAD2Q15796 467 aaKnown RBP17.77■□□□□ 0.44
COL7A1-203ENST00000459756 TMEM119Q4V9L6 283 aa17.77■□□□□ 0.44
COL7A1-203ENST00000459756 TMEM184AQ6ZMB5 413 aa17.77■□□□□ 0.44
COL7A1-203ENST00000459756 DAW1Q8N136 415 aa17.77■□□□□ 0.44
COL7A1-203ENST00000459756 SYT2Q8N9I0 419 aaPredicted RBP17.77■□□□□ 0.44
COL7A1-203ENST00000459756 BCL7CQ8WUZ0 217 aaPredicted RBP17.77■□□□□ 0.44
COL7A1-203ENST00000459756 SNX21Q969T3 373 aa17.77■□□□□ 0.44
COL7A1-203ENST00000459756 ADPGKQ9BRR6 497 aa17.77■□□□□ 0.44
COL7A1-203ENST00000459756 KIFC3Q9BVG8 833 aa17.77■□□□□ 0.44
COL7A1-203ENST00000459756 ZBP1Q9H171 429 aa17.77■□□□□ 0.44
COL7A1-203ENST00000459756 KCND2Q9NZV8 630 aa17.77■□□□□ 0.44
COL7A1-203ENST00000459756 PRKAG3Q9UGI9 489 aa17.77■□□□□ 0.44
COL7A1-203ENST00000459756 BARX2Q9UMQ3 279 aaPredicted RBP17.77■□□□□ 0.44
COL7A1-203ENST00000459756 C5orf42Q9H799 3197 aa17.77■□□□□ 0.44
COL7A1-203ENST00000459756 PHLPP2Q6ZVD8 1323 aa17.76■□□□□ 0.43
COL7A1-203ENST00000459756 C2orf71A6NGG8 1288 aa17.76■□□□□ 0.43
COL7A1-203ENST00000459756 TTLL13PA6NNM8 815 aa17.76■□□□□ 0.43
COL7A1-203ENST00000459756 K7ERI5 159 aa17.76■□□□□ 0.43
COL7A1-203ENST00000459756 NRP1O14786 923 aa17.76■□□□□ 0.43
COL7A1-203ENST00000459756 MBTPS2O43462 519 aa17.76■□□□□ 0.43
COL7A1-203ENST00000459756 CXCL14O95715 111 aa17.76■□□□□ 0.43
COL7A1-203ENST00000459756 SSBP05455 408 aaKnown RBP eCLIP17.76■□□□□ 0.43
COL7A1-203ENST00000459756 CTSAP10619 480 aa17.76■□□□□ 0.43
COL7A1-203ENST00000459756 AKAP5P24588 427 aa17.76■□□□□ 0.43
COL7A1-203ENST00000459756 NPTX2P47972 431 aa17.76■□□□□ 0.43
COL7A1-203ENST00000459756 SCNN1GP51170 649 aa17.76■□□□□ 0.43
COL7A1-203ENST00000459756 PEX3P56589 373 aa17.76■□□□□ 0.43
COL7A1-203ENST00000459756 DSC1Q08554 894 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms