RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 NKD2Q969F2 451 aaPredicted RBP11.65□□□□□ -0.54
HDLBP-227ENST00000458564 TMEM143Q96AN5 459 aa11.65□□□□□ -0.54
HDLBP-227ENST00000458564 AIFM3Q96NN9 605 aa11.65□□□□□ -0.54
HDLBP-227ENST00000458564 FAM193BQ96PV7 902 aaPredicted RBP11.65□□□□□ -0.54
HDLBP-227ENST00000458564 RTP3Q9BQQ7 232 aa11.65□□□□□ -0.54
HDLBP-227ENST00000458564 LXNQ9BS40 222 aa11.65□□□□□ -0.54
HDLBP-227ENST00000458564 PHF20Q9BVI0 1012 aa11.65□□□□□ -0.54
HDLBP-227ENST00000458564 RXFP1Q9HBX9 757 aa11.65□□□□□ -0.54
HDLBP-227ENST00000458564 WDR6Q9NNW5 1121 aaKnown RBP11.65□□□□□ -0.54
HDLBP-227ENST00000458564 MAN1C1Q9NR34 630 aa11.65□□□□□ -0.54
HDLBP-227ENST00000458564 EPS15L1Q9UBC2 864 aa11.65□□□□□ -0.54
HDLBP-227ENST00000458564 ZMYM2Q9UBW7 1377 aa11.65□□□□□ -0.55
HDLBP-227ENST00000458564 C2orf16Q68DN1 1984 aa11.65□□□□□ -0.55
HDLBP-227ENST00000458564 WDR87Q6ZQQ6 2873 aa11.65□□□□□ -0.55
HDLBP-227ENST00000458564 CACNA1AO00555 2505 aa11.64□□□□□ -0.55
HDLBP-227ENST00000458564 ZNF292O60281 2723 aa11.64□□□□□ -0.55
HDLBP-227ENST00000458564 TEX28O15482 410 aa11.64□□□□□ -0.55
HDLBP-227ENST00000458564 GLUD1P00367 558 aa11.64□□□□□ -0.55
HDLBP-227ENST00000458564 POMCP01189 267 aa11.64□□□□□ -0.55
HDLBP-227ENST00000458564 SSBP05455 408 aaKnown RBP eCLIP11.64□□□□□ -0.55
HDLBP-227ENST00000458564 SRGAP2CP0DJJ0 459 aa11.64□□□□□ -0.55
HDLBP-227ENST00000458564 GLUD2P49448 558 aa11.64□□□□□ -0.55
HDLBP-227ENST00000458564 PTENP60484 403 aa11.64□□□□□ -0.55
HDLBP-227ENST00000458564 DSG1Q02413 1049 aa11.64□□□□□ -0.55
HDLBP-227ENST00000458564 POU5F1BQ06416 359 aa11.64□□□□□ -0.55
HDLBP-227ENST00000458564 SPIRE1Q08AE8 756 aa11.64□□□□□ -0.55
HDLBP-227ENST00000458564 EPHA7Q15375 998 aa11.64□□□□□ -0.55
HDLBP-227ENST00000458564 KIAA0319Q5VV43 1072 aa11.64□□□□□ -0.55
HDLBP-227ENST00000458564 NOTUMQ6P988 496 aa11.64□□□□□ -0.55
HDLBP-227ENST00000458564 FRMD5Q7Z6J6 570 aa11.64□□□□□ -0.55
HDLBP-227ENST00000458564 IFNLR1Q8IU57 520 aaPredicted RBP11.64□□□□□ -0.55
HDLBP-227ENST00000458564 RNF149Q8NC42 400 aa11.64□□□□□ -0.55
HDLBP-227ENST00000458564 FLCNQ8NFG4 579 aa11.64□□□□□ -0.55
HDLBP-227ENST00000458564 HDAC7Q8WUI4 952 aa11.64□□□□□ -0.55
HDLBP-227ENST00000458564 STAMQ92783 540 aa11.64□□□□□ -0.55
HDLBP-227ENST00000458564 HAS1Q92839 578 aa11.64□□□□□ -0.55
HDLBP-227ENST00000458564 NAP1L4Q99733 375 aaKnown RBP11.64□□□□□ -0.55
HDLBP-227ENST00000458564 TM6SF1Q9BZW5 370 aa11.64□□□□□ -0.55
HDLBP-227ENST00000458564 CHST7Q9NS84 486 aa11.64□□□□□ -0.55
HDLBP-227ENST00000458564 WNT16Q9UBV4 365 aa11.64□□□□□ -0.55
HDLBP-227ENST00000458564 IPPQ9Y573 584 aa11.64□□□□□ -0.55
HDLBP-227ENST00000458564 CYP46A1Q9Y6A2 500 aa11.64□□□□□ -0.55
HDLBP-227ENST00000458564 DNAH14Q0VDD8 3507 aa11.64□□□□□ -0.55
HDLBP-227ENST00000458564 CLUHO75153 1309 aa11.63□□□□□ -0.55
HDLBP-227ENST00000458564 STK36Q9NRP7 1315 aa11.63□□□□□ -0.55
HDLBP-227ENST00000458564 CCDC194A0A1B0GVG4 234 aa11.63□□□□□ -0.55
HDLBP-227ENST00000458564 ARL5CA6NH57 179 aa11.63□□□□□ -0.55
HDLBP-227ENST00000458564 PI15O43692 258 aa11.63□□□□□ -0.55
HDLBP-227ENST00000458564 TSPAN1O60635 241 aa11.63□□□□□ -0.55
HDLBP-227ENST00000458564 ERLIN2O94905 339 aa11.63□□□□□ -0.55
HDLBP-227ENST00000458564 ITGA4P13612 1032 aa11.63□□□□□ -0.55
HDLBP-227ENST00000458564 AK2P54819 239 aa11.63□□□□□ -0.55
HDLBP-227ENST00000458564 MXD4Q14582 209 aaPredicted RBP11.63□□□□□ -0.55
HDLBP-227ENST00000458564 OTUD6AQ7L8S5 288 aa11.63□□□□□ -0.55
HDLBP-227ENST00000458564 SIX5Q8N196 739 aa11.63□□□□□ -0.55
HDLBP-227ENST00000458564 DTWD2Q8NBA8 298 aa11.63□□□□□ -0.55
HDLBP-227ENST00000458564 NXPE3Q969Y0 559 aa11.63□□□□□ -0.55
HDLBP-227ENST00000458564 NFKBIZQ9BYH8 718 aa11.63□□□□□ -0.55
HDLBP-227ENST00000458564 ZSWIM4Q9H7M6 989 aa11.63□□□□□ -0.55
HDLBP-227ENST00000458564 XPNPEP1Q9NQW7 623 aa11.63□□□□□ -0.55
HDLBP-227ENST00000458564 FBXL21Q9UKT6 434 aa11.63□□□□□ -0.55
HDLBP-227ENST00000458564 PRG3Q9Y2Y8 225 aaPredicted RBP11.63□□□□□ -0.55
HDLBP-227ENST00000458564 DMXL1Q9Y485 3027 aa11.63□□□□□ -0.55
HDLBP-227ENST00000458564 EP300Q09472 2414 aaPredicted RBP11.62□□□□□ -0.55
HDLBP-227ENST00000458564 FRYLO94915 3013 aa11.62□□□□□ -0.55
HDLBP-227ENST00000458564 CCDC195A0A1B0GUA6 201 aa11.62□□□□□ -0.55
HDLBP-227ENST00000458564 C2CD2LO14523 706 aa11.62□□□□□ -0.55
HDLBP-227ENST00000458564 CDKL5O76039 1030 aa11.62□□□□□ -0.55
HDLBP-227ENST00000458564 LYPLA2O95372 231 aa11.62□□□□□ -0.55
HDLBP-227ENST00000458564 MLH1P40692 756 aa11.62□□□□□ -0.55
HDLBP-227ENST00000458564 OR1G1P47890 313 aa11.62□□□□□ -0.55
HDLBP-227ENST00000458564 ANGPT1Q15389 498 aa11.62□□□□□ -0.55
HDLBP-227ENST00000458564 AMHR2Q16671 573 aa11.62□□□□□ -0.55
HDLBP-227ENST00000458564 TAS1R1Q7RTX1 841 aa11.62□□□□□ -0.55
HDLBP-227ENST00000458564 ERMP1Q7Z2K6 904 aa11.62□□□□□ -0.55
HDLBP-227ENST00000458564 SLFN12Q8IYM2 578 aa11.62□□□□□ -0.55
HDLBP-227ENST00000458564 ZNF707Q96C28 371 aaPredicted RBP11.62□□□□□ -0.55
HDLBP-227ENST00000458564 ZFP42Q96MM3 310 aa11.62□□□□□ -0.55
HDLBP-227ENST00000458564 GAD1Q99259 594 aa11.62□□□□□ -0.55
HDLBP-227ENST00000458564 MTRQ99707 1265 aa11.62□□□□□ -0.55
HDLBP-227ENST00000458564 EIF2AQ9BY44 585 aaKnown RBP11.62□□□□□ -0.55
HDLBP-227ENST00000458564 CSRNP2Q9H175 543 aa11.62□□□□□ -0.55
HDLBP-227ENST00000458564 SLKQ9H2G2 1235 aaPredicted RBP11.62□□□□□ -0.55
HDLBP-227ENST00000458564 RNF39Q9H2S5 420 aa11.62□□□□□ -0.55
HDLBP-227ENST00000458564 PLEKHA4Q9H4M7 779 aa11.62□□□□□ -0.55
HDLBP-227ENST00000458564 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.62□□□□□ -0.55
HDLBP-227ENST00000458564 ZDHHC7Q9NXF8 308 aa11.62□□□□□ -0.55
HDLBP-227ENST00000458564 RGL1Q9NZL6 768 aa11.62□□□□□ -0.55
HDLBP-227ENST00000458564 FNIP2Q9P278 1114 aa11.62□□□□□ -0.55
HDLBP-227ENST00000458564 KCNJ14Q9UNX9 436 aa11.62□□□□□ -0.55
HDLBP-227ENST00000458564 GIT1Q9Y2X7 761 aa11.62□□□□□ -0.55
HDLBP-227ENST00000458564 ARID2Q68CP9 1835 aa11.62□□□□□ -0.55
HDLBP-227ENST00000458564 DOCK8Q8NF50 2099 aa11.61□□□□□ -0.55
HDLBP-227ENST00000458564 KRBA1A5PL33 1030 aa11.61□□□□□ -0.55
HDLBP-227ENST00000458564 NARSO43776 548 aaKnown RBP11.61□□□□□ -0.55
HDLBP-227ENST00000458564 CCNT1O60563 726 aaKnown RBP11.61□□□□□ -0.55
HDLBP-227ENST00000458564 NR1I2O75469 434 aa11.61□□□□□ -0.55
HDLBP-227ENST00000458564 RFPL2O75678 378 aa11.61□□□□□ -0.55
HDLBP-227ENST00000458564 SRFP11831 508 aa11.61□□□□□ -0.55
HDLBP-227ENST00000458564 XBP1P17861 261 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms