RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 CBWD6Q4V339 395 aa9.56□□□□□ -0.88
RIF1-208ENST00000457745 ARSIQ5FYB1 569 aa9.56□□□□□ -0.88
RIF1-208ENST00000457745 CBWD3Q5JTY5 395 aa9.56□□□□□ -0.88
RIF1-208ENST00000457745 CBWD5Q5RIA9 395 aa9.56□□□□□ -0.88
RIF1-208ENST00000457745 GDF6Q6KF10 455 aaPredicted RBP9.56□□□□□ -0.88
RIF1-208ENST00000457745 GJB7Q6PEY0 223 aa9.56□□□□□ -0.88
RIF1-208ENST00000457745 SLC9A9Q8IVB4 645 aa9.56□□□□□ -0.88
RIF1-208ENST00000457745 C12orf56Q8IXR9 622 aa9.56□□□□□ -0.88
RIF1-208ENST00000457745 DRC7Q8IY82 874 aa9.56□□□□□ -0.88
RIF1-208ENST00000457745 DEPTORQ8TB45 409 aa9.56□□□□□ -0.88
RIF1-208ENST00000457745 PSPC1Q8WXF1 523 aaKnown RBP9.56□□□□□ -0.88
RIF1-208ENST00000457745 DHX38Q92620 1227 aaKnown RBP9.56□□□□□ -0.88
RIF1-208ENST00000457745 ERO1AQ96HE7 468 aa9.56□□□□□ -0.88
RIF1-208ENST00000457745 POP1Q99575 1024 aaKnown RBP9.56□□□□□ -0.88
RIF1-208ENST00000457745 CRACR2AQ9BSW2 395 aa9.56□□□□□ -0.88
RIF1-208ENST00000457745 NOC4LQ9BVI4 516 aaKnown RBP9.56□□□□□ -0.88
RIF1-208ENST00000457745 GTPBP4Q9BZE4 634 aaKnown RBP9.56□□□□□ -0.88
RIF1-208ENST00000457745 UNC93B1Q9H1C4 597 aa9.56□□□□□ -0.88
RIF1-208ENST00000457745 NDST4Q9H3R1 872 aa9.56□□□□□ -0.88
RIF1-208ENST00000457745 XPNPEP3Q9NQH7 507 aa9.56□□□□□ -0.88
RIF1-208ENST00000457745 RRAGDQ9NQL2 400 aaPredicted RBP9.56□□□□□ -0.88
RIF1-208ENST00000457745 WDR70Q9NW82 654 aa9.56□□□□□ -0.88
RIF1-208ENST00000457745 DDX20Q9UHI6 824 aaKnown RBP9.56□□□□□ -0.88
RIF1-208ENST00000457745 STYXL1Q9Y6J8 313 aa9.56□□□□□ -0.88
RIF1-208ENST00000457745 PHLPP2Q6ZVD8 1323 aa9.56□□□□□ -0.88
RIF1-208ENST00000457745 A0A0U1RQJ8 604 aa9.55□□□□□ -0.88
RIF1-208ENST00000457745 CETN3O15182 167 aa9.55□□□□□ -0.88
RIF1-208ENST00000457745 SLC16A3O15427 465 aaKnown RBP9.55□□□□□ -0.88
RIF1-208ENST00000457745 GPR32O75388 356 aa9.55□□□□□ -0.88
RIF1-208ENST00000457745 SLC34A2O95436 690 aa9.55□□□□□ -0.88
RIF1-208ENST00000457745 PRKCBP05771 671 aa9.55□□□□□ -0.88
RIF1-208ENST00000457745 HARSP12081 509 aaKnown RBP9.55□□□□□ -0.88
RIF1-208ENST00000457745 SLC9A1P19634 815 aa9.55□□□□□ -0.88
RIF1-208ENST00000457745 PTENP60484 403 aa9.55□□□□□ -0.88
RIF1-208ENST00000457745 MTF1Q14872 753 aa9.55□□□□□ -0.88
RIF1-208ENST00000457745 KIZQ2M2Z5 673 aa9.55□□□□□ -0.88
RIF1-208ENST00000457745 GNASQ5JWF2 1037 aa9.55□□□□□ -0.88
RIF1-208ENST00000457745 LMBRD2Q68DH5 695 aaPredicted RBP9.55□□□□□ -0.88
RIF1-208ENST00000457745 NFRKBQ6P4R8 1299 aa9.55□□□□□ -0.88
RIF1-208ENST00000457745 ZBTB33Q86T24 672 aa9.55□□□□□ -0.88
RIF1-208ENST00000457745 FAM186BQ8IYM0 893 aa9.55□□□□□ -0.88
RIF1-208ENST00000457745 SYCP3Q8IZU3 236 aa9.55□□□□□ -0.88
RIF1-208ENST00000457745 OLIG1Q8TAK6 271 aa9.55□□□□□ -0.88
RIF1-208ENST00000457745 RAET1EQ8TD07 263 aa9.55□□□□□ -0.88
RIF1-208ENST00000457745 CPLX3Q8WVH0 158 aa9.55□□□□□ -0.88
RIF1-208ENST00000457745 DNAJB3Q8WWF6 145 aa9.55□□□□□ -0.88
RIF1-208ENST00000457745 ATRIPQ8WXE1 791 aa9.55□□□□□ -0.88
RIF1-208ENST00000457745 ZNF516Q92618 1163 aa9.55□□□□□ -0.88
RIF1-208ENST00000457745 HVCN1Q96D96 273 aa9.55□□□□□ -0.88
RIF1-208ENST00000457745 CPB2Q96IY4 423 aa9.55□□□□□ -0.88
RIF1-208ENST00000457745 IFT74Q96LB3 600 aa9.55□□□□□ -0.88
RIF1-208ENST00000457745 GANQ9H2C0 597 aa9.55□□□□□ -0.88
RIF1-208ENST00000457745 FZD8Q9H461 694 aa9.55□□□□□ -0.88
RIF1-208ENST00000457745 C17orf75Q9HAS0 396 aa9.55□□□□□ -0.88
RIF1-208ENST00000457745 PTPRHQ9HD43 1115 aa9.55□□□□□ -0.88
RIF1-208ENST00000457745 AGPAT5Q9NUQ2 364 aa9.55□□□□□ -0.88
RIF1-208ENST00000457745 MAGEC2Q9UBF1 373 aaPredicted RBP9.55□□□□□ -0.88
RIF1-208ENST00000457745 ZNF215Q9UL58 517 aaPredicted RBP9.55□□□□□ -0.88
RIF1-208ENST00000457745 TRIP11Q15643 1979 aa9.54□□□□□ -0.88
RIF1-208ENST00000457745 A0A0B4J269 797 aa9.54□□□□□ -0.88
RIF1-208ENST00000457745 TTC26A0AVF1 554 aa9.54□□□□□ -0.88
RIF1-208ENST00000457745 USP27XA6NNY8 438 aa9.54□□□□□ -0.88
RIF1-208ENST00000457745 LRRIQ3A6PVS8 624 aaPredicted RBP9.54□□□□□ -0.88
RIF1-208ENST00000457745 HNRNPDLO14979 420 aaKnown RBP9.54□□□□□ -0.88
RIF1-208ENST00000457745 CBFA2T2O43439 604 aa9.54□□□□□ -0.88
RIF1-208ENST00000457745 EXOC3O60645 756 aa9.54□□□□□ -0.88
RIF1-208ENST00000457745 MFAP3LO75121 409 aa9.54□□□□□ -0.88
RIF1-208ENST00000457745 PTMAP06454 111 aaKnown RBP9.54□□□□□ -0.88
RIF1-208ENST00000457745 ASGR1P07306 291 aa9.54□□□□□ -0.88
RIF1-208ENST00000457745 PNMA6AP0CW24 399 aaPredicted RBP9.54□□□□□ -0.88
RIF1-208ENST00000457745 RARBP10826 455 aa9.54□□□□□ -0.88
RIF1-208ENST00000457745 CYP2C9P11712 490 aa9.54□□□□□ -0.88
RIF1-208ENST00000457745 HOXB1P14653 301 aaPredicted RBP9.54□□□□□ -0.88
RIF1-208ENST00000457745 PROZP22891 400 aa9.54□□□□□ -0.88
RIF1-208ENST00000457745 CST5P28325 142 aaPredicted RBP9.54□□□□□ -0.88
RIF1-208ENST00000457745 CASP14P31944 242 aa9.54□□□□□ -0.88
RIF1-208ENST00000457745 ACOT2P49753 483 aa9.54□□□□□ -0.88
RIF1-208ENST00000457745 CPT1AP50416 773 aa9.54□□□□□ -0.88
RIF1-208ENST00000457745 MCCD1P59942 119 aaPredicted RBP9.54□□□□□ -0.88
RIF1-208ENST00000457745 KCNH2Q12809 1159 aa9.54□□□□□ -0.88
RIF1-208ENST00000457745 ALCAMQ13740 583 aa9.54□□□□□ -0.88
RIF1-208ENST00000457745 DCAF17Q5H9S7 520 aaPredicted RBP9.54□□□□□ -0.88
RIF1-208ENST00000457745 SPECC1LQ69YQ0 1117 aa9.54□□□□□ -0.88
RIF1-208ENST00000457745 FRMD5Q7Z6J6 570 aa9.54□□□□□ -0.88
RIF1-208ENST00000457745 LRRC8AQ8IWT6 810 aa9.54□□□□□ -0.88
RIF1-208ENST00000457745 PXYLP1Q8TE99 480 aa9.54□□□□□ -0.88
RIF1-208ENST00000457745 BAP1Q92560 729 aa9.54□□□□□ -0.88
RIF1-208ENST00000457745 SEMA4DQ92854 862 aa9.54□□□□□ -0.88
RIF1-208ENST00000457745 FBXL18Q96ME1 805 aa9.54□□□□□ -0.88
RIF1-208ENST00000457745 ERGIC2Q96RQ1 377 aa9.54□□□□□ -0.88
RIF1-208ENST00000457745 OSMRQ99650 979 aa9.54□□□□□ -0.88
RIF1-208ENST00000457745 ACO2Q99798 780 aaKnown RBP9.54□□□□□ -0.88
RIF1-208ENST00000457745 MTG1Q9BT17 334 aaPredicted RBP9.54□□□□□ -0.88
RIF1-208ENST00000457745 LSM14BQ9BX40 385 aaKnown RBP9.54□□□□□ -0.88
RIF1-208ENST00000457745 PDZD7Q9H5P4 517 aa9.54□□□□□ -0.88
RIF1-208ENST00000457745 TMEM134Q9H6X4 195 aa9.54□□□□□ -0.88
RIF1-208ENST00000457745 TMEM206Q9H813 350 aa9.54□□□□□ -0.88
RIF1-208ENST00000457745 MMRN2Q9H8L6 949 aa9.54□□□□□ -0.88
RIF1-208ENST00000457745 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.54□□□□□ -0.88
RIF1-208ENST00000457745 ANKFY1Q9P2R3 1169 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms