RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 TMEM134Q9H6X4 195 aa25.53■■□□□ 1.68
CBX3-204ENST00000456948 POLD4Q9HCU8 107 aa25.53■■□□□ 1.68
CBX3-204ENST00000456948 TBC1D13Q9NVG8 400 aa25.53■■□□□ 1.68
CBX3-204ENST00000456948 ZC3H11AO75152 810 aaKnown RBP eCLIP25.52■■□□□ 1.68
CBX3-204ENST00000456948 NR1I2O75469 434 aa25.52■■□□□ 1.68
CBX3-204ENST00000456948 NPTXRO95502 500 aa25.52■■□□□ 1.68
CBX3-204ENST00000456948 PLS3P13797 630 aa25.52■■□□□ 1.68
CBX3-204ENST00000456948 PLCG1P19174 1290 aa25.52■■□□□ 1.68
CBX3-204ENST00000456948 DDIT3P35638 169 aa25.52■■□□□ 1.68
CBX3-204ENST00000456948 NASPP49321 788 aaPredicted RBP25.52■■□□□ 1.68
CBX3-204ENST00000456948 TFF2Q03403 129 aa25.52■■□□□ 1.68
CBX3-204ENST00000456948 GRIN1Q05586 938 aa25.52■■□□□ 1.68
CBX3-204ENST00000456948 STRN3Q13033 797 aa25.52■■□□□ 1.68
CBX3-204ENST00000456948 DHX8Q14562 1220 aaKnown RBP25.52■■□□□ 1.68
CBX3-204ENST00000456948 SMG8Q8ND04 991 aaKnown RBP25.52■■□□□ 1.68
CBX3-204ENST00000456948 SPIRE2Q8WWL2 714 aa25.52■■□□□ 1.68
CBX3-204ENST00000456948 MRPS27Q92552 414 aaKnown RBP25.52■■□□□ 1.68
CBX3-204ENST00000456948 RAD54LQ92698 747 aa25.52■■□□□ 1.68
CBX3-204ENST00000456948 TMEM169Q96HH4 297 aa25.52■■□□□ 1.68
CBX3-204ENST00000456948 NTPCRQ9BSD7 190 aaKnown RBP25.52■■□□□ 1.68
CBX3-204ENST00000456948 CCDC113Q9H0I3 377 aa25.52■■□□□ 1.68
CBX3-204ENST00000456948 TLR9Q9NR96 1032 aa25.52■■□□□ 1.68
CBX3-204ENST00000456948 STK39Q9UEW8 545 aa25.52■■□□□ 1.68
CBX3-204ENST00000456948 CFAP45Q9UL16 551 aa25.52■■□□□ 1.68
CBX3-204ENST00000456948 ODF2LQ9ULJ1 636 aa25.52■■□□□ 1.68
CBX3-204ENST00000456948 VCANP13611 3396 aa25.51■■□□□ 1.67
CBX3-204ENST00000456948 FSD2A1L4K1 749 aa25.51■■□□□ 1.67
CBX3-204ENST00000456948 SPTLC2O15270 562 aa25.51■■□□□ 1.67
CBX3-204ENST00000456948 F13A1P00488 732 aa25.51■■□□□ 1.67
CBX3-204ENST00000456948 ALDH2P05091 517 aa25.51■■□□□ 1.67
CBX3-204ENST00000456948 BCAR1P56945 870 aa25.51■■□□□ 1.67
CBX3-204ENST00000456948 RAD51AP2Q09MP3 1159 aa25.51■■□□□ 1.67
CBX3-204ENST00000456948 DCAF4L1Q3SXM0 396 aa25.51■■□□□ 1.67
CBX3-204ENST00000456948 TCEAL5Q5H9L2 206 aa25.51■■□□□ 1.67
CBX3-204ENST00000456948 FOXD4L5Q5VV16 416 aaPredicted RBP25.51■■□□□ 1.67
CBX3-204ENST00000456948 RRAGBQ5VZM2 374 aa25.51■■□□□ 1.67
CBX3-204ENST00000456948 CCDC73Q6ZRK6 1079 aa25.51■■□□□ 1.67
CBX3-204ENST00000456948 GPBP1Q86WP2 473 aa25.51■■□□□ 1.67
CBX3-204ENST00000456948 FOXD4L4Q8WXT5 416 aaPredicted RBP25.51■■□□□ 1.67
CBX3-204ENST00000456948 LARP4BQ92615 738 aaKnown RBP25.51■■□□□ 1.67
CBX3-204ENST00000456948 EPSTI1Q96J88 318 aa25.51■■□□□ 1.67
CBX3-204ENST00000456948 APOL6Q9BWW8 343 aa25.51■■□□□ 1.67
CBX3-204ENST00000456948 MRPL4Q9BYD3 311 aaKnown RBP25.51■■□□□ 1.67
CBX3-204ENST00000456948 STK17AQ9UEE5 414 aa25.51■■□□□ 1.67
CBX3-204ENST00000456948 PPP6R2O75170 966 aa25.5■■□□□ 1.67
CBX3-204ENST00000456948 YEATS4O95619 227 aa25.5■■□□□ 1.67
CBX3-204ENST00000456948 ABCD1P33897 745 aa25.5■■□□□ 1.67
CBX3-204ENST00000456948 ATF7IP2Q5U623 682 aa25.5■■□□□ 1.67
CBX3-204ENST00000456948 CUL9Q8IWT3 2517 aa25.5■■□□□ 1.67
CBX3-204ENST00000456948 LINC00301Q8NCQ3 95 aa25.5■■□□□ 1.67
CBX3-204ENST00000456948 KIFC3Q9BVG8 833 aa25.5■■□□□ 1.67
CBX3-204ENST00000456948 KIAA1671Q9BY89 1806 aa25.5■■□□□ 1.67
CBX3-204ENST00000456948 GBP3Q9H0R5 595 aa25.5■■□□□ 1.67
CBX3-204ENST00000456948 NGRNQ9NPE2 291 aaKnown RBP25.5■■□□□ 1.67
CBX3-204ENST00000456948 TFIP11Q9UBB9 837 aaKnown RBP25.5■■□□□ 1.67
CBX3-204ENST00000456948 PARP2Q9UGN5 583 aa25.5■■□□□ 1.67
CBX3-204ENST00000456948 MYO7AQ13402 2215 aa25.49■■□□□ 1.67
CBX3-204ENST00000456948 ZMYM2Q9UBW7 1377 aa25.49■■□□□ 1.67
CBX3-204ENST00000456948 MEIS3P2A8K0S8 358 aa25.49■■□□□ 1.67
CBX3-204ENST00000456948 SFI1A8K8P3 1242 aa25.49■■□□□ 1.67
CBX3-204ENST00000456948 FAM13AO94988 1023 aa25.49■■□□□ 1.67
CBX3-204ENST00000456948 SPECC1Q5M775 1068 aa25.49■■□□□ 1.67
CBX3-204ENST00000456948 EP400NLQ6ZTU2 488 aa25.49■■□□□ 1.67
CBX3-204ENST00000456948 DAW1Q8N136 415 aa25.49■■□□□ 1.67
CBX3-204ENST00000456948 CLIC6Q96NY7 704 aa25.49■■□□□ 1.67
CBX3-204ENST00000456948 RPS6KC1Q96S38 1066 aa25.49■■□□□ 1.67
CBX3-204ENST00000456948 TMEM175Q9BSA9 504 aa25.49■■□□□ 1.67
CBX3-204ENST00000456948 NRDE2Q9H7Z3 1164 aa25.49■■□□□ 1.67
CBX3-204ENST00000456948 HCSTQ9UBK5 93 aa25.49■■□□□ 1.67
CBX3-204ENST00000456948 ARL5CA6NH57 179 aa25.48■■□□□ 1.67
CBX3-204ENST00000456948 TBCAO75347 108 aaKnown RBP25.48■■□□□ 1.67
CBX3-204ENST00000456948 CSPG5O95196 566 aa25.48■■□□□ 1.67
CBX3-204ENST00000456948 POMCP01189 267 aa25.48■■□□□ 1.67
CBX3-204ENST00000456948 MAPK7Q13164 816 aa25.48■■□□□ 1.67
CBX3-204ENST00000456948 MCM6Q14566 821 aa25.48■■□□□ 1.67
CBX3-204ENST00000456948 SV2BQ7L1I2 683 aa25.48■■□□□ 1.67
CBX3-204ENST00000456948 CDR2LQ86X02 465 aaPredicted RBP25.48■■□□□ 1.67
CBX3-204ENST00000456948 SLC39A11Q8N1S5 342 aa25.48■■□□□ 1.67
CBX3-204ENST00000456948 KCNG4Q8TDN1 519 aa25.48■■□□□ 1.67
CBX3-204ENST00000456948 PABPC5Q96DU9 382 aaKnown RBP25.48■■□□□ 1.67
CBX3-204ENST00000456948 GAD1Q99259 594 aa25.48■■□□□ 1.67
CBX3-204ENST00000456948 NXF3Q9H4D5 531 aaKnown RBP25.48■■□□□ 1.67
CBX3-204ENST00000456948 PDZD7Q9H5P4 517 aa25.48■■□□□ 1.67
CBX3-204ENST00000456948 ENTPD7Q9NQZ7 604 aa25.48■■□□□ 1.67
CBX3-204ENST00000456948 ARHGAP28Q9P2N2 729 aa25.48■■□□□ 1.67
CBX3-204ENST00000456948 FAN1Q9Y2M0 1017 aa25.48■■□□□ 1.67
CBX3-204ENST00000456948 HES2Q9Y543 173 aa25.48■■□□□ 1.67
CBX3-204ENST00000456948 MYH11P35749 1972 aa25.47■■□□□ 1.67
CBX3-204ENST00000456948 SLC16A4O15374 487 aa25.47■■□□□ 1.67
CBX3-204ENST00000456948 MLH1P40692 756 aa25.47■■□□□ 1.67
CBX3-204ENST00000456948 TMC7Q7Z402 723 aa25.47■■□□□ 1.67
CBX3-204ENST00000456948 MYCT1Q8N699 235 aa25.47■■□□□ 1.67
CBX3-204ENST00000456948 TMEM87AQ8NBN3 555 aa25.47■■□□□ 1.67
CBX3-204ENST00000456948 TCHPQ9BT92 498 aa25.47■■□□□ 1.67
CBX3-204ENST00000456948 RNF39Q9H2S5 420 aa25.47■■□□□ 1.67
CBX3-204ENST00000456948 TLE6Q9H808 572 aa25.47■■□□□ 1.67
CBX3-204ENST00000456948 UBE2ZQ9H832 354 aaPredicted RBP25.47■■□□□ 1.67
CBX3-204ENST00000456948 PARVGQ9HBI0 331 aa25.47■■□□□ 1.67
CBX3-204ENST00000456948 BLOC1S4Q9NUP1 217 aa25.47■■□□□ 1.67
CBX3-204ENST00000456948 TNFSF13BQ9Y275 285 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms