RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 NT5C1B-RDH14C9J2C7 533 aa19.76■□□□□ 0.75
MSH6-207ENST00000456246 ATP2C1P98194 919 aaPredicted RBP19.76■□□□□ 0.75
MSH6-207ENST00000456246 MAPK6Q16659 721 aa19.76■□□□□ 0.75
MSH6-207ENST00000456246 ARL6IP4Q66PJ3 421 aaKnown RBP19.76■□□□□ 0.75
MSH6-207ENST00000456246 DEPTORQ8TB45 409 aa19.76■□□□□ 0.75
MSH6-207ENST00000456246 EIF2AQ9BY44 585 aaKnown RBP19.76■□□□□ 0.75
MSH6-207ENST00000456246 GBP3Q9H0R5 595 aa19.76■□□□□ 0.75
MSH6-207ENST00000456246 FZD8Q9H461 694 aa19.76■□□□□ 0.75
MSH6-207ENST00000456246 DDX19AQ9NUU7 478 aaKnown RBP19.76■□□□□ 0.75
MSH6-207ENST00000456246 BARX2Q9UMQ3 279 aaPredicted RBP19.76■□□□□ 0.75
MSH6-207ENST00000456246 DNM3Q9UQ16 869 aa19.76■□□□□ 0.75
MSH6-207ENST00000456246 IRAK3Q9Y616 596 aa19.76■□□□□ 0.75
MSH6-207ENST00000456246 HIDE1A8MVS5 230 aa19.75■□□□□ 0.75
MSH6-207ENST00000456246 ALDH2P05091 517 aa19.75■□□□□ 0.75
MSH6-207ENST00000456246 HOXB8P17481 243 aaPredicted RBP19.75■□□□□ 0.75
MSH6-207ENST00000456246 SLC11A1P49279 550 aa19.75■□□□□ 0.75
MSH6-207ENST00000456246 EFNA5P52803 228 aa19.75■□□□□ 0.75
MSH6-207ENST00000456246 KCNC3Q14003 757 aa19.75■□□□□ 0.75
MSH6-207ENST00000456246 LARP1BQ659C4 914 aaKnown RBP19.75■□□□□ 0.75
MSH6-207ENST00000456246 VPS52Q8N1B4 723 aa19.75■□□□□ 0.75
MSH6-207ENST00000456246 CASP10Q92851 521 aa19.75■□□□□ 0.75
MSH6-207ENST00000456246 ZBP1Q9H171 429 aa19.75■□□□□ 0.75
MSH6-207ENST00000456246 DNAJB4Q9UDY4 337 aa19.75■□□□□ 0.75
MSH6-207ENST00000456246 PHLPP2Q6ZVD8 1323 aa19.75■□□□□ 0.75
MSH6-207ENST00000456246 C2orf71A6NGG8 1288 aa19.74■□□□□ 0.75
MSH6-207ENST00000456246 C19orf67A6NJJ6 358 aa19.74■□□□□ 0.75
MSH6-207ENST00000456246 N4BP3O15049 544 aa19.74■□□□□ 0.75
MSH6-207ENST00000456246 B4GALT5O43286 388 aa19.74■□□□□ 0.75
MSH6-207ENST00000456246 NR1I2O75469 434 aa19.74■□□□□ 0.75
MSH6-207ENST00000456246 BMP15O95972 392 aa19.74■□□□□ 0.75
MSH6-207ENST00000456246 CTSAP10619 480 aa19.74■□□□□ 0.75
MSH6-207ENST00000456246 ECM1Q16610 540 aa19.74■□□□□ 0.75
MSH6-207ENST00000456246 BRAPQ7Z569 592 aa19.74■□□□□ 0.75
MSH6-207ENST00000456246 TMEM173Q86WV6 379 aaPredicted RBP19.74■□□□□ 0.75
MSH6-207ENST00000456246 ZNF280BQ86YH2 543 aa19.74■□□□□ 0.75
MSH6-207ENST00000456246 TMEM87AQ8NBN3 555 aa19.74■□□□□ 0.75
MSH6-207ENST00000456246 CD320Q9NPF0 282 aa19.74■□□□□ 0.75
MSH6-207ENST00000456246 FAN1Q9Y2M0 1017 aa19.74■□□□□ 0.75
MSH6-207ENST00000456246 ARL5CA6NH57 179 aa19.73■□□□□ 0.75
MSH6-207ENST00000456246 PI4K2BG5E9Z4 385 aa19.73■□□□□ 0.75
MSH6-207ENST00000456246 POMCP01189 267 aa19.73■□□□□ 0.75
MSH6-207ENST00000456246 PRKCBP05771 671 aa19.73■□□□□ 0.75
MSH6-207ENST00000456246 ALADP13716 330 aa19.73■□□□□ 0.75
MSH6-207ENST00000456246 PDCP20941 246 aa19.73■□□□□ 0.75
MSH6-207ENST00000456246 MLH1P40692 756 aa19.73■□□□□ 0.75
MSH6-207ENST00000456246 PRPF4BQ13523 1007 aaKnown RBP19.73■□□□□ 0.75
MSH6-207ENST00000456246 CUL4AQ13619 759 aa19.73■□□□□ 0.75
MSH6-207ENST00000456246 TMEM132AQ24JP5 1023 aa19.73■□□□□ 0.75
MSH6-207ENST00000456246 VN1R2Q8NFZ6 395 aa19.73■□□□□ 0.75
MSH6-207ENST00000456246 BSNDQ8WZ55 320 aa19.73■□□□□ 0.75
MSH6-207ENST00000456246 GAD1Q99259 594 aa19.73■□□□□ 0.75
MSH6-207ENST00000456246 ADPGKQ9BRR6 497 aa19.73■□□□□ 0.75
MSH6-207ENST00000456246 TIPINQ9BVW5 301 aa19.73■□□□□ 0.75
MSH6-207ENST00000456246 NT5C3AQ9H0P0 336 aa19.73■□□□□ 0.75
MSH6-207ENST00000456246 NXF3Q9H4D5 531 aaKnown RBP19.73■□□□□ 0.75
MSH6-207ENST00000456246 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.72■□□□□ 0.75
MSH6-207ENST00000456246 ACKR2O00590 384 aa19.72■□□□□ 0.75
MSH6-207ENST00000456246 SLC26A4O43511 780 aa19.72■□□□□ 0.75
MSH6-207ENST00000456246 DDHD2O94830 711 aa19.72■□□□□ 0.75
MSH6-207ENST00000456246 NPTXRO95502 500 aa19.72■□□□□ 0.75
MSH6-207ENST00000456246 CXCL14O95715 111 aa19.72■□□□□ 0.75
MSH6-207ENST00000456246 CA8P35219 290 aa19.72■□□□□ 0.75
MSH6-207ENST00000456246 DSC1Q08554 894 aa19.72■□□□□ 0.75
MSH6-207ENST00000456246 IL17AQ16552 155 aa19.72■□□□□ 0.75
MSH6-207ENST00000456246 TPRNQ4KMQ1 711 aa19.72■□□□□ 0.75
MSH6-207ENST00000456246 ANKRD54Q6NXT1 300 aa19.72■□□□□ 0.75
MSH6-207ENST00000456246 APBB1IPQ7Z5R6 666 aaPredicted RBP19.72■□□□□ 0.75
MSH6-207ENST00000456246 PPFIBP1Q86W92 1011 aa19.72■□□□□ 0.75
MSH6-207ENST00000456246 DRC1Q96MC2 740 aa19.72■□□□□ 0.75
MSH6-207ENST00000456246 APOL6Q9BWW8 343 aa19.72■□□□□ 0.75
MSH6-207ENST00000456246 CCDC113Q9H0I3 377 aa19.72■□□□□ 0.75
MSH6-207ENST00000456246 RNF39Q9H2S5 420 aa19.72■□□□□ 0.75
MSH6-207ENST00000456246 C17orf75Q9HAS0 396 aa19.72■□□□□ 0.75
MSH6-207ENST00000456246 USP15Q9Y4E8 981 aaPredicted RBP19.72■□□□□ 0.75
MSH6-207ENST00000456246 HES2Q9Y543 173 aa19.72■□□□□ 0.75
MSH6-207ENST00000456246 PP2D1A8MPX8 630 aa19.71■□□□□ 0.75
MSH6-207ENST00000456246 NRP1O14786 923 aa19.71■□□□□ 0.75
MSH6-207ENST00000456246 AFF1P51825 1210 aaKnown RBP19.71■□□□□ 0.75
MSH6-207ENST00000456246 GRIK3Q13003 919 aa19.71■□□□□ 0.75
MSH6-207ENST00000456246 HYIQ5T013 277 aa19.71■□□□□ 0.75
MSH6-207ENST00000456246 COLGALT2Q8IYK4 626 aa19.71■□□□□ 0.75
MSH6-207ENST00000456246 BCL7CQ8WUZ0 217 aaPredicted RBP19.71■□□□□ 0.75
MSH6-207ENST00000456246 AK8Q96MA6 479 aa19.71■□□□□ 0.75
MSH6-207ENST00000456246 RPS6KC1Q96S38 1066 aa19.71■□□□□ 0.75
MSH6-207ENST00000456246 BACH2Q9BYV9 841 aa19.71■□□□□ 0.75
MSH6-207ENST00000456246 EPHX3Q9H6B9 360 aa19.71■□□□□ 0.75
MSH6-207ENST00000456246 KCNG1Q9UIX4 513 aa19.71■□□□□ 0.75
MSH6-207ENST00000456246 SSX2IPQ9Y2D8 614 aa19.71■□□□□ 0.75
MSH6-207ENST00000456246 HCFC2Q9Y5Z7 792 aa19.71■□□□□ 0.75
MSH6-207ENST00000456246 TDRD15B5MCY1 1934 aaKnown RBP19.7■□□□□ 0.74
MSH6-207ENST00000456246 B4GALT3O60512 393 aa19.7■□□□□ 0.74
MSH6-207ENST00000456246 CLASP2O75122 1294 aaKnown RBP19.7■□□□□ 0.74
MSH6-207ENST00000456246 SCNN1GP51170 649 aa19.7■□□□□ 0.74
MSH6-207ENST00000456246 DMP1Q13316 513 aaPredicted RBP19.7■□□□□ 0.74
MSH6-207ENST00000456246 DCAF4L1Q3SXM0 396 aa19.7■□□□□ 0.74
MSH6-207ENST00000456246 SUSD6Q92537 303 aa19.7■□□□□ 0.74
MSH6-207ENST00000456246 CDK5RAP3Q96JB5 506 aa19.7■□□□□ 0.74
MSH6-207ENST00000456246 ZFP42Q96MM3 310 aa19.7■□□□□ 0.74
MSH6-207ENST00000456246 MMTAG2Q9BU76 263 aaKnown RBP19.7■□□□□ 0.74
MSH6-207ENST00000456246 PHF7Q9BWX1 381 aaPredicted RBP19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms