RNA–Protein interactions for RNA: ENST00000456174.6

HDAC9-218, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-218ENST00000456174 DGKZQ13574 1117 aa8.21□□□□□ -1.1
HDAC9-218ENST00000456174 GALNTL6Q49A17 601 aa8.21□□□□□ -1.1
HDAC9-218ENST00000456174 KRT79Q5XKE5 535 aa8.21□□□□□ -1.1
HDAC9-218ENST00000456174 KLHL10Q6JEL2 608 aa8.21□□□□□ -1.1
HDAC9-218ENST00000456174 RUFY4Q6ZNE9 571 aa8.21□□□□□ -1.1
HDAC9-218ENST00000456174 TRPM8Q7Z2W7 1104 aa8.21□□□□□ -1.1
HDAC9-218ENST00000456174 LDHDQ86WU2 507 aa8.21□□□□□ -1.1
HDAC9-218ENST00000456174 SCYL3Q8IZE3 742 aa8.21□□□□□ -1.1
HDAC9-218ENST00000456174 STKLD1Q8NE28 680 aa8.21□□□□□ -1.1
HDAC9-218ENST00000456174 WHAMMQ8TF30 809 aa8.21□□□□□ -1.1
HDAC9-218ENST00000456174 PRCCQ92733 491 aaPredicted RBP8.21□□□□□ -1.1
HDAC9-218ENST00000456174 UIMC1Q96RL1 719 aa8.21□□□□□ -1.1
HDAC9-218ENST00000456174 MED15Q96RN5 788 aa8.21□□□□□ -1.1
HDAC9-218ENST00000456174 WRNIP1Q96S55 665 aa8.21□□□□□ -1.1
HDAC9-218ENST00000456174 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.21□□□□□ -1.1
HDAC9-218ENST00000456174 RNF181Q9P0P0 153 aa8.21□□□□□ -1.1
HDAC9-218ENST00000456174 TRIM10Q9UDY6 481 aa8.21□□□□□ -1.1
HDAC9-218ENST00000456174 FZD1Q9UP38 647 aa8.21□□□□□ -1.1
HDAC9-218ENST00000456174 DAAM1Q9Y4D1 1078 aa8.21□□□□□ -1.1
HDAC9-218ENST00000456174 EPN1Q9Y6I3 576 aaPredicted RBP8.21□□□□□ -1.1
HDAC9-218ENST00000456174 ABCB11O95342 1321 aa8.21□□□□□ -1.1
HDAC9-218ENST00000456174 GCOM1H8Y6P7 765 aaPredicted RBP8.2□□□□□ -1.1
HDAC9-218ENST00000456174 IGF2BP3O00425 579 aaKnown RBP eCLIP8.2□□□□□ -1.1
HDAC9-218ENST00000456174 HIP1RO75146 1068 aa8.2□□□□□ -1.1
HDAC9-218ENST00000456174 DDNO94850 711 aaPredicted RBP8.2□□□□□ -1.1
HDAC9-218ENST00000456174 NDUFA10O95299 355 aa8.2□□□□□ -1.1
HDAC9-218ENST00000456174 POLR2MP0CAP2 368 aa8.2□□□□□ -1.1
HDAC9-218ENST00000456174 GBP1P32455 592 aa8.2□□□□□ -1.1
HDAC9-218ENST00000456174 MSH2P43246 934 aa8.2□□□□□ -1.1
HDAC9-218ENST00000456174 TRPC1P48995 793 aa8.2□□□□□ -1.1
HDAC9-218ENST00000456174 MTMR2Q13614 643 aa8.2□□□□□ -1.1
HDAC9-218ENST00000456174 PRR16Q569H4 304 aa8.2□□□□□ -1.1
HDAC9-218ENST00000456174 ZNF658Q5TYW1 1059 aaPredicted RBP8.2□□□□□ -1.1
HDAC9-218ENST00000456174 ZNF365Q70YC5 407 aa8.2□□□□□ -1.1
HDAC9-218ENST00000456174 IFT20Q8IY31 132 aa8.2□□□□□ -1.1
HDAC9-218ENST00000456174 SPATA4Q8NEY3 305 aa8.2□□□□□ -1.1
HDAC9-218ENST00000456174 SNX29Q8TEQ0 813 aa8.2□□□□□ -1.1
HDAC9-218ENST00000456174 FBF1Q8TES7 1133 aa8.2□□□□□ -1.1
HDAC9-218ENST00000456174 ATP8B4Q8TF62 1192 aa8.2□□□□□ -1.1
HDAC9-218ENST00000456174 IRGQQ8WZA9 623 aa8.2□□□□□ -1.1
HDAC9-218ENST00000456174 PNMA5Q96PV4 448 aa8.2□□□□□ -1.1
HDAC9-218ENST00000456174 CTAGE1Q96RT6 745 aa8.2□□□□□ -1.1
HDAC9-218ENST00000456174 FAM129AQ9BZQ8 928 aa8.2□□□□□ -1.1
HDAC9-218ENST00000456174 TANGO6Q9C0B7 1094 aa8.2□□□□□ -1.1
HDAC9-218ENST00000456174 CARD9Q9H257 536 aa8.2□□□□□ -1.1
HDAC9-218ENST00000456174 SCOCQ9UIL1 159 aa8.2□□□□□ -1.1
HDAC9-218ENST00000456174 PPP2R3BQ9Y5P8 575 aa8.2□□□□□ -1.1
HDAC9-218ENST00000456174 RBBP6Q7Z6E9 1792 aaKnown RBP8.2□□□□□ -1.1
HDAC9-218ENST00000456174 COL11A1P12107 1806 aaPredicted RBP8.2□□□□□ -1.1
HDAC9-218ENST00000456174 EIF4E1BA6NMX2 242 aaKnown RBP8.2□□□□□ -1.1
HDAC9-218ENST00000456174 ZNF185O15231 689 aa8.2□□□□□ -1.1
HDAC9-218ENST00000456174 PFDN1O60925 122 aa8.2□□□□□ -1.1
HDAC9-218ENST00000456174 ICAM1P05362 532 aa8.2□□□□□ -1.1
HDAC9-218ENST00000456174 PDHA1P08559 390 aa8.2□□□□□ -1.1
HDAC9-218ENST00000456174 HPDP32754 393 aaPredicted RBP8.2□□□□□ -1.1
HDAC9-218ENST00000456174 ZNF76P36508 570 aa8.2□□□□□ -1.1
HDAC9-218ENST00000456174 STX17P56962 302 aa8.2□□□□□ -1.1
HDAC9-218ENST00000456174 HERVK_113P62684 666 aa8.2□□□□□ -1.1
HDAC9-218ENST00000456174 AMPD3Q01432 767 aa8.2□□□□□ -1.1
HDAC9-218ENST00000456174 SPP2Q13103 211 aa8.2□□□□□ -1.1
HDAC9-218ENST00000456174 PLS1Q14651 629 aa8.2□□□□□ -1.1
HDAC9-218ENST00000456174 ERMARDQ5T6L9 678 aa8.2□□□□□ -1.1
HDAC9-218ENST00000456174 CEP128Q6ZU80 1094 aa8.2□□□□□ -1.1
HDAC9-218ENST00000456174 SV2BQ7L1I2 683 aa8.2□□□□□ -1.1
HDAC9-218ENST00000456174 ZNF554Q86TJ5 538 aa8.2□□□□□ -1.1
HDAC9-218ENST00000456174 SLFN12Q8IYM2 578 aa8.2□□□□□ -1.1
HDAC9-218ENST00000456174 LSM14AQ8ND56 463 aaKnown RBP8.2□□□□□ -1.1
HDAC9-218ENST00000456174 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.2□□□□□ -1.1
HDAC9-218ENST00000456174 AGBL1Q96MI9 1066 aa8.2□□□□□ -1.1
HDAC9-218ENST00000456174 ZNF317Q96PQ6 595 aaPredicted RBP8.2□□□□□ -1.1
HDAC9-218ENST00000456174 SMC6Q96SB8 1091 aa8.2□□□□□ -1.1
HDAC9-218ENST00000456174 NUDT12Q9BQG2 462 aa8.2□□□□□ -1.1
HDAC9-218ENST00000456174 WDR18Q9BV38 432 aa8.2□□□□□ -1.1
HDAC9-218ENST00000456174 RAB17Q9H0T7 212 aa8.2□□□□□ -1.1
HDAC9-218ENST00000456174 CNOT10Q9H9A5 744 aaKnown RBP8.2□□□□□ -1.1
HDAC9-218ENST00000456174 RNPEPL1Q9HAU8 725 aa8.2□□□□□ -1.1
HDAC9-218ENST00000456174 AS3MTQ9HBK9 375 aa8.2□□□□□ -1.1
HDAC9-218ENST00000456174 CREBZFQ9NS37 354 aa8.2□□□□□ -1.1
HDAC9-218ENST00000456174 SAMSN1Q9NSI8 373 aaKnown RBP8.2□□□□□ -1.1
HDAC9-218ENST00000456174 EMILIN3Q9NT22 766 aa8.2□□□□□ -1.1
HDAC9-218ENST00000456174 RYDENQ9NUL5 291 aaKnown RBP8.2□□□□□ -1.1
HDAC9-218ENST00000456174 BLOC1S4Q9NUP1 217 aa8.2□□□□□ -1.1
HDAC9-218ENST00000456174 ZNHIT6Q9NWK9 470 aaKnown RBP8.2□□□□□ -1.1
HDAC9-218ENST00000456174 PDP2Q9P2J9 529 aa8.2□□□□□ -1.1
HDAC9-218ENST00000456174 STK17AQ9UEE5 414 aa8.2□□□□□ -1.1
HDAC9-218ENST00000456174 TSKSQ9UJT2 592 aa8.2□□□□□ -1.1
HDAC9-218ENST00000456174 CCPG1Q9ULG6 757 aa8.2□□□□□ -1.1
HDAC9-218ENST00000456174 SNX12Q9UMY4 172 aa8.2□□□□□ -1.1
HDAC9-218ENST00000456174 COMMD3-BMI1R4GMX3 469 aa8.2□□□□□ -1.1
HDAC9-218ENST00000456174 ZNF536O15090 1300 aa8.2□□□□□ -1.1
HDAC9-218ENST00000456174 TESPA1A2RU30 521 aaPredicted RBP8.19□□□□□ -1.1
HDAC9-218ENST00000456174 FAM86B1E9PN63 330 aa8.19□□□□□ -1.1
HDAC9-218ENST00000456174 H0YGN5 161 aa8.19□□□□□ -1.1
HDAC9-218ENST00000456174 TBX3O15119 743 aa8.19□□□□□ -1.1
HDAC9-218ENST00000456174 KLRC4O43908 158 aa8.19□□□□□ -1.1
HDAC9-218ENST00000456174 CYP3A4P08684 503 aa8.19□□□□□ -1.1
HDAC9-218ENST00000456174 KRT16P08779 473 aa8.19□□□□□ -1.1
HDAC9-218ENST00000456174 FAM86B2P0C5J1 330 aa8.19□□□□□ -1.1
HDAC9-218ENST00000456174 MYZAPP0CAP1 466 aa8.19□□□□□ -1.1
HDAC9-218ENST00000456174 YBX3P16989 372 aaKnown RBP eCLIP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms